Click here to switch to the map view.

The map label for this gene is 17230330

Identifier: 17230330

GI number: 17230330

Start: 3458481

End: 3459266

Strand: Direct

Name: 17230330

Synonym: alr2838

Alternate gene names: NA

Gene position: 3458481-3459266 (Clockwise)

Preceding gene: 17230329

Following gene: 17230331

Centisome position: 53.92

GC content: 41.6

Gene sequence:

>786_bases
GTGTCTGATGACTCGCCAAGTATGGAGATGCAGCAGCAAAATCAAAAGATTGTTGAACAATATCCCCAGACAATTTATAT
TACAGGCCCCCGAATTGGTGTTTGTGCTAACCGCAACAATGCAGTTAACGCCATCCCCGCATCAGAAACAGACTTGATTG
CTTTTATTGATGATGATATTTGTGTTGAACCAGAGTTTATTGGTAGTGCGATCGCCCAATACTCAAAAATGTCACCAGAA
CAAAGTCAGCACACCATTCTTTCTGGCATTAGCTACACTACCGATGGATATGTGATGGCTCCGGGAAAGTTATCTTTTCG
CGGATATTTCCGTGCTAGTGATGTTCCCGAAACTATAGCTATTCATGCCTCTATTTTCCCCCGTCAGTTTTTTGAGCAGG
AACAGTGGGATGAAAATATATTTTTTGGTTATGAAGATGCAGAACTTTGTTTACGGGCATTGAAACGGGGTTATAAGATT
TTAAATTGTCCAGAATTACGCGCCCTCAATGCTGGAGGTAATGGTAAAAGTTCCTTGATGGAATCGGATATCGGCAAACT
CACTAAATACGAAATTTCTATAGAAGCGGCTAGGCTCTACATCGGGATTAAACGTTACAAAGATTTATTCCCTAATGTCT
TAAAACTCATAGGTTTTTGCTTTGTATACTTCCTGCACATGACTGCTTACCTCTGCAAGCGAGGTTCCCTACAAGCCTGG
CCAGAAATTATTCGCCGTTCTCATATCCAAAAATTATGGCAGCCGTCCCAGTTGAATTGGGGATGA

Upstream 100 bases:

>100_bases
GCGGCTATCGGCTTGCATCACAACTAGAAATCGCCCTGAGGATTTGGAAAATTGCTTGCGATCGCTGTGGGATTCCCAGA
CCAAACCACACTCGGTCATT

Downstream 100 bases:

>100_bases
GAAGAGGCAGGGGGGCAGGGGGCAGGTGTAGGTTTTTAATCAAGTGATGAGTGATGACTATCGCACTAACAAAAAAATAG
TAGTTTTATCCCCTAAACCC

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosyl Transferase Group 2 Family Protein

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MSDDSPSMEMQQQNQKIVEQYPQTIYITGPRIGVCANRNNAVNAIPASETDLIAFIDDDICVEPEFIGSAIAQYSKMSPE
QSQHTILSGISYTTDGYVMAPGKLSFRGYFRASDVPETIAIHASIFPRQFFEQEQWDENIFFGYEDAELCLRALKRGYKI
LNCPELRALNAGGNGKSSLMESDIGKLTKYEISIEAARLYIGIKRYKDLFPNVLKLIGFCFVYFLHMTAYLCKRGSLQAW
PEIIRRSHIQKLWQPSQLNWG

Sequences:

>Translated_261_residues
MSDDSPSMEMQQQNQKIVEQYPQTIYITGPRIGVCANRNNAVNAIPASETDLIAFIDDDICVEPEFIGSAIAQYSKMSPE
QSQHTILSGISYTTDGYVMAPGKLSFRGYFRASDVPETIAIHASIFPRQFFEQEQWDENIFFGYEDAELCLRALKRGYKI
LNCPELRALNAGGNGKSSLMESDIGKLTKYEISIEAARLYIGIKRYKDLFPNVLKLIGFCFVYFLHMTAYLCKRGSLQAW
PEIIRRSHIQKLWQPSQLNWG
>Mature_260_residues
SDDSPSMEMQQQNQKIVEQYPQTIYITGPRIGVCANRNNAVNAIPASETDLIAFIDDDICVEPEFIGSAIAQYSKMSPEQ
SQHTILSGISYTTDGYVMAPGKLSFRGYFRASDVPETIAIHASIFPRQFFEQEQWDENIFFGYEDAELCLRALKRGYKIL
NCPELRALNAGGNGKSSLMESDIGKLTKYEISIEAARLYIGIKRYKDLFPNVLKLIGFCFVYFLHMTAYLCKRGSLQAWP
EIIRRSHIQKLWQPSQLNWG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29694; Mature: 29563

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDSPSMEMQQQNQKIVEQYPQTIYITGPRIGVCANRNNAVNAIPASETDLIAFIDDDI
CCCCCCCHHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCCEEECCCCCCCEEEEECCCC
CVEPEFIGSAIAQYSKMSPEQSQHTILSGISYTTDGYVMAPGKLSFRGYFRASDVPETIA
EECHHHHHHHHHHHHHCCCCHHHHHHHHCCEECCCCEEECCCCEEEEEEECCCCCCHHEE
IHASIFPRQFFEQEQWDENIFFGYEDAELCLRALKRGYKILNCPELRALNAGGNGKSSLM
EHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHCCCEEECCCCCEEECCCCCCHHHHH
ESDIGKLTKYEISIEAARLYIGIKRYKDLFPNVLKLIGFCFVYFLHMTAYLCKRGSLQAW
HHHHHHHEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
PEIIRRSHIQKLWQPSQLNWG
HHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SDDSPSMEMQQQNQKIVEQYPQTIYITGPRIGVCANRNNAVNAIPASETDLIAFIDDDI
CCCCCCHHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCCEEECCCCCCCEEEEECCCC
CVEPEFIGSAIAQYSKMSPEQSQHTILSGISYTTDGYVMAPGKLSFRGYFRASDVPETIA
EECHHHHHHHHHHHHHCCCCHHHHHHHHCCEECCCCEEECCCCEEEEEEECCCCCCHHEE
IHASIFPRQFFEQEQWDENIFFGYEDAELCLRALKRGYKILNCPELRALNAGGNGKSSLM
EHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHCCCEEECCCCCEEECCCCCCHHHHH
ESDIGKLTKYEISIEAARLYIGIKRYKDLFPNVLKLIGFCFVYFLHMTAYLCKRGSLQAW
HHHHHHHEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
PEIIRRSHIQKLWQPSQLNWG
HHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA