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The map label for this gene is rfaG [C]

Identifier: 17230331

GI number: 17230331

Start: 3459432

End: 3460577

Strand: Direct

Name: rfaG [C]

Synonym: alr2839

Alternate gene names: 17230331

Gene position: 3459432-3460577 (Clockwise)

Preceding gene: 17230330

Following gene: 17230332

Centisome position: 53.94

GC content: 43.63

Gene sequence:

>1146_bases
GTGAGACTAGGTATTGTTACACATAATGTGATTAAAGGTGATGGTCAAGGACGGGTTAATTATGAAATTGCCCAAGAAGC
AATTCGTCGTGGTCATCGTGTCATTTTGTTAGCTAGTCAAGTAGCTCCAGAATTACAACAGAGTGAGCAAGTTAATTGGG
TTGCTATTTCTGTTAAGCAATGGCCTACAGAATTACTCCGCAACTTGATTTTCGCTTTCATCAGTGCCAATTGGTTGCAC
AAACACCGTTCTCAAGTTGATTTAGTCAAAATTAATGGGGCAATTACTCATGCCTCTGGTGATGTGAATGCGGTGCATTT
TGTCCATAGTTCTTGGTTGAATTTTTCCTCTAGCAAGGCTCAGTCAAATTCAGCTAAAACTACACGATCGCGCAGGATTT
TTTATAATTTTTACCAGTGGTTGTACACCGTTTTAAATGCACGTTGGGAAAAAAAGGCTTTTCGTCGCGCACGCGTGGTA
GTGGCTGTTTCTAGTCGGGTGGCTGAGGATTTGCAAGCCATCGGTGTAGCACCAGAAAGGATTCGGGTAATTGTTAATGG
TGTGGATTTGCAGGAATTTTCACCGGGAAATAATCAGCGTTCACGGTGGGGATTACCGGCAGGAGTTCCTTTAGCTCTAT
TTGCTGGTGATATTAGAATCTCCCGTAAGAACTTGGATACAGTCCTGAAAGCTTTAGTTAATGTGCCAGATTTACATCTA
GCAGTTGCGGGAATTACGGAAGGAAGTCCATATCTTCAGTTAGCGCAATCCCTGGGATTGGATGAAAGAGTACATTTTTT
AGGACTGCGGCGGGATGTTCCCGAACTGATGAAAGCCGTAGATTTTTTCGTGTTCCCTTCACGTTATGAGCCTTTCGGCT
TGGTGGTGATTGAAGCGATGGCTTCTGGTTTACCTGTGATTACTGCTAGTTCCACAGGTGCAGCAGATTTGTTAACGCCG
GAATCTGGAATAGTTTTAGCGGATTCAGACGATGTAGAAGCTTTGGCGCAAGCGTTGTCTTTATTAGCAAGCGATCGCAC
TTTAAGAGAACAAATGGGACAAGTTGCCCGCACCATAGCCGAGCAACACAGTTGGACAAATATGGCACAGCGTTATATAG
ATTTATTCGAGGAGTTGCACCAGTAA

Upstream 100 bases:

>100_bases
CTAACAAAAAAATAGTAGTTTTATCCCCTAAACCCCTACACCCTTATACCCCTAAACCCCTACACCCATCAGGGGTAGAA
ACTTAGAGGATATTTATATT

Downstream 100 bases:

>100_bases
TGAAAATTACAGTCATTGTGCCTACTTACCGCCGTACCAAAGACCTAACACGCTGCTTGGAGTCATTAGAAAAGCAATCT
CGACCAGCCGATGAGGTATT

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MRLGIVTHNVIKGDGQGRVNYEIAQEAIRRGHRVILLASQVAPELQQSEQVNWVAISVKQWPTELLRNLIFAFISANWLH
KHRSQVDLVKINGAITHASGDVNAVHFVHSSWLNFSSSKAQSNSAKTTRSRRIFYNFYQWLYTVLNARWEKKAFRRARVV
VAVSSRVAEDLQAIGVAPERIRVIVNGVDLQEFSPGNNQRSRWGLPAGVPLALFAGDIRISRKNLDTVLKALVNVPDLHL
AVAGITEGSPYLQLAQSLGLDERVHFLGLRRDVPELMKAVDFFVFPSRYEPFGLVVIEAMASGLPVITASSTGAADLLTP
ESGIVLADSDDVEALAQALSLLASDRTLREQMGQVARTIAEQHSWTNMAQRYIDLFEELHQ

Sequences:

>Translated_381_residues
MRLGIVTHNVIKGDGQGRVNYEIAQEAIRRGHRVILLASQVAPELQQSEQVNWVAISVKQWPTELLRNLIFAFISANWLH
KHRSQVDLVKINGAITHASGDVNAVHFVHSSWLNFSSSKAQSNSAKTTRSRRIFYNFYQWLYTVLNARWEKKAFRRARVV
VAVSSRVAEDLQAIGVAPERIRVIVNGVDLQEFSPGNNQRSRWGLPAGVPLALFAGDIRISRKNLDTVLKALVNVPDLHL
AVAGITEGSPYLQLAQSLGLDERVHFLGLRRDVPELMKAVDFFVFPSRYEPFGLVVIEAMASGLPVITASSTGAADLLTP
ESGIVLADSDDVEALAQALSLLASDRTLREQMGQVARTIAEQHSWTNMAQRYIDLFEELHQ
>Mature_381_residues
MRLGIVTHNVIKGDGQGRVNYEIAQEAIRRGHRVILLASQVAPELQQSEQVNWVAISVKQWPTELLRNLIFAFISANWLH
KHRSQVDLVKINGAITHASGDVNAVHFVHSSWLNFSSSKAQSNSAKTTRSRRIFYNFYQWLYTVLNARWEKKAFRRARVV
VAVSSRVAEDLQAIGVAPERIRVIVNGVDLQEFSPGNNQRSRWGLPAGVPLALFAGDIRISRKNLDTVLKALVNVPDLHL
AVAGITEGSPYLQLAQSLGLDERVHFLGLRRDVPELMKAVDFFVFPSRYEPFGLVVIEAMASGLPVITASSTGAADLLTP
ESGIVLADSDDVEALAQALSLLASDRTLREQMGQVARTIAEQHSWTNMAQRYIDLFEELHQ

Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI1790061, Length=256, Percent_Identity=26.171875, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 42416; Mature: 42416

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLGIVTHNVIKGDGQGRVNYEIAQEAIRRGHRVILLASQVAPELQQSEQVNWVAISVKQ
CEEEEEEEEEEECCCCCCCCHHHHHHHHHCCCEEEEEEHHHCHHHHHCCCCEEEEEEHHH
WPTELLRNLIFAFISANWLHKHRSQVDLVKINGAITHASGDVNAVHFVHSSWLNFSSSKA
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCCEEEEEEHHHHCCCCCCCC
QSNSAKTTRSRRIFYNFYQWLYTVLNARWEKKAFRRARVVVAVSSRVAEDLQAIGVAPER
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCHHH
IRVIVNGVDLQEFSPGNNQRSRWGLPAGVPLALFAGDIRISRKNLDTVLKALVNVPDLHL
EEEEEECCCHHHCCCCCCCCCCCCCCCCCCHHEEECCEEEEHHHHHHHHHHHHCCCCCEE
AVAGITEGSPYLQLAQSLGLDERVHFLGLRRDVPELMKAVDFFVFPSRYEPFGLVVIEAM
EEEECCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ASGLPVITASSTGAADLLTPESGIVLADSDDVEALAQALSLLASDRTLREQMGQVARTIA
HCCCCEEEECCCCCCEEECCCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
EQHSWTNMAQRYIDLFEELHQ
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLGIVTHNVIKGDGQGRVNYEIAQEAIRRGHRVILLASQVAPELQQSEQVNWVAISVKQ
CEEEEEEEEEEECCCCCCCCHHHHHHHHHCCCEEEEEEHHHCHHHHHCCCCEEEEEEHHH
WPTELLRNLIFAFISANWLHKHRSQVDLVKINGAITHASGDVNAVHFVHSSWLNFSSSKA
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCCEEEEEEHHHHCCCCCCCC
QSNSAKTTRSRRIFYNFYQWLYTVLNARWEKKAFRRARVVVAVSSRVAEDLQAIGVAPER
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCHHH
IRVIVNGVDLQEFSPGNNQRSRWGLPAGVPLALFAGDIRISRKNLDTVLKALVNVPDLHL
EEEEEECCCHHHCCCCCCCCCCCCCCCCCCHHEEECCEEEEHHHHHHHHHHHHCCCCCEE
AVAGITEGSPYLQLAQSLGLDERVHFLGLRRDVPELMKAVDFFVFPSRYEPFGLVVIEAM
EEEECCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ASGLPVITASSTGAADLLTPESGIVLADSDDVEALAQALSLLASDRTLREQMGQVARTIA
HCCCCEEEECCCCCCEEECCCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
EQHSWTNMAQRYIDLFEELHQ
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]