| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230003
Identifier: 17230003
GI number: 17230003
Start: 3016816
End: 3017430
Strand: Reverse
Name: 17230003
Synonym: all2511
Alternate gene names: NA
Gene position: 3017430-3016816 (Counterclockwise)
Preceding gene: 17230004
Following gene: 17230001
Centisome position: 47.05
GC content: 38.7
Gene sequence:
>615_bases TTGACATCTACCACTACAGACAACTTTGTTAACATCTTATGGGAAGCGGCGGCGGCGTATCGTGAACAAAACAAAAATCG TCCCCAGCCAGAAGTCATAGTAAATGCTTTATTACAAGCGGAAAAATCAGCCAAGAAACAACACCTGACTTATGATTTTG ATAGTTTAGTTGGACAATGGCGATTGTGTTTTGCAACAGGGACGAAAAAAGCTCAAAAACGCGGGGGAATAATTTTAGGA AAGGGTTGGTATGTACCGCAATTTACCAAAATTTATATATCTTTTAGTTCCGGTTCAACAGAAGATGTTAACAGAGGGGA AGTTGGCAACCAGGTGCAATTGGGGTCATTATTATTAAGACTTACAGGCCCAGCTAAATATTTAGGCAAGAAAAATCTTT TAGCTTTTGACTTTACCCAAATGTATATTAATGTATTTGGTCGAAAAATTTACCAACAAAATATTCGTTCAGGGAAAGTT AATTACGAAGATTTTTACAGCCAATCCATCGCTAAACAAGCATTCTTTGCTTTCTTTATAGTGACACAAGATTTTATTGC CGCCCGTGGACGTGGTGGCGGTTTGGCACTCTGGATTCGGGAAAGTAATGGGTAA
Upstream 100 bases:
>100_bases GATTTACTATAATTATTTTGAATTTTGCGAAAAGTTCTGTAGGCGGGTTTCCCGCCGTAGGAAACTTTTCAAGACGAATT TTGAATTGGAGCGAAGCGAC
Downstream 100 bases:
>100_bases TTCAGAATGGTGTAGAGTATGTATGGCTAAAATCAAATAAGCGTCCTATTTTGTATGAGTAAAAGAAGCGATCGCTTGCT CAATTTCTTTACTGACTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MTSTTTDNFVNILWEAAAAYREQNKNRPQPEVIVNALLQAEKSAKKQHLTYDFDSLVGQWRLCFATGTKKAQKRGGIILG KGWYVPQFTKIYISFSSGSTEDVNRGEVGNQVQLGSLLLRLTGPAKYLGKKNLLAFDFTQMYINVFGRKIYQQNIRSGKV NYEDFYSQSIAKQAFFAFFIVTQDFIAARGRGGGLALWIRESNG
Sequences:
>Translated_204_residues MTSTTTDNFVNILWEAAAAYREQNKNRPQPEVIVNALLQAEKSAKKQHLTYDFDSLVGQWRLCFATGTKKAQKRGGIILG KGWYVPQFTKIYISFSSGSTEDVNRGEVGNQVQLGSLLLRLTGPAKYLGKKNLLAFDFTQMYINVFGRKIYQQNIRSGKV NYEDFYSQSIAKQAFFAFFIVTQDFIAARGRGGGLALWIRESNG >Mature_203_residues TSTTTDNFVNILWEAAAAYREQNKNRPQPEVIVNALLQAEKSAKKQHLTYDFDSLVGQWRLCFATGTKKAQKRGGIILGK GWYVPQFTKIYISFSSGSTEDVNRGEVGNQVQLGSLLLRLTGPAKYLGKKNLLAFDFTQMYINVFGRKIYQQNIRSGKVN YEDFYSQSIAKQAFFAFFIVTQDFIAARGRGGGLALWIRESNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22989; Mature: 22858
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTTTDNFVNILWEAAAAYREQNKNRPQPEVIVNALLQAEKSAKKQHLTYDFDSLVGQW CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHE RLCFATGTKKAQKRGGIILGKGWYVPQFTKIYISFSSGSTEDVNRGEVGNQVQLGSLLLR EEEEECCCHHHHHCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEHHHHHHH LTGPAKYLGKKNLLAFDFTQMYINVFGRKIYQQNIRSGKVNYEDFYSQSIAKQAFFAFFI CCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH VTQDFIAARGRGGGLALWIRESNG HHHHHHHHCCCCCCEEEEEECCCC >Mature Secondary Structure TSTTTDNFVNILWEAAAAYREQNKNRPQPEVIVNALLQAEKSAKKQHLTYDFDSLVGQW CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHE RLCFATGTKKAQKRGGIILGKGWYVPQFTKIYISFSSGSTEDVNRGEVGNQVQLGSLLLR EEEEECCCHHHHHCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEHHHHHHH LTGPAKYLGKKNLLAFDFTQMYINVFGRKIYQQNIRSGKVNYEDFYSQSIAKQAFFAFFI CCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH VTQDFIAARGRGGGLALWIRESNG HHHHHHHHCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA