| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17229952
Identifier: 17229952
GI number: 17229952
Start: 2956938
End: 2958218
Strand: Reverse
Name: 17229952
Synonym: all2460
Alternate gene names: NA
Gene position: 2958218-2956938 (Counterclockwise)
Preceding gene: 17229953
Following gene: 17229951
Centisome position: 46.12
GC content: 34.27
Gene sequence:
>1281_bases ATGCAACAAGTCATAGTAAGTAATCGATTTATTTTAGGCATAGTTGCCTTTAGTGTGAGTTTTGGTTTGAGCCTAGTTCC CAAATGGAATTTTAGTCAAGCTTTTTTCACAGGTGTAATTACAGTAGTAGCTACTTATGCAGCCGCCTTATTTGTAGATA AGCGACGGAGGAATTATGAACTATTACTTTTAAGTTCACTCCGTAAACGCATTCAAGAAACCGAGGGACTGAAGTCCAGG CTAGCCAGAGAAATTGAACAACTAGAGACCCATCGCAGTTTATTATACACAGAGTCACAGCAGCTAAAAAATCAAATTTT AGATAGCCGTAATCAAAGAGATAGTTTGCATCGAGATTTAGGAATTTTTGCCAGTCAAAGGAAACAGATAGAATCGGAGC TTGCTAACCTAAAATCTACAATTTGCAGCTTGGAAGAAAATCAAATAGAACTGAACAATTCCTTATCTACACTGGCATCA GAAAAACGTAGATTAGAATCTAACCATCATGTTTGTCGGGCAGAAATTACCCAGTTACGAAATCAAATTAGTGATCTAAA TCAAGAAAAACAAGAACTTGAAAACAGTATTACTTTGCTAGGAAGGATAAAACCTCAATTAGAAGAAAAACTTTATGAAC TGCGAATTAATATTCAAGATTTAGAGTTAGAGAAAAGCAAGCAATCTCAAATACTTCTAGATACGAGCAATGAACAGGAA AGCCTAGCTGCAAATATTGACTATTTACAAATTCAAAAAACAGAACGCCACAATGAATTACAACAAATCCAAAATGAAAT CTTTTTGTTGCAACAAGAACGAGACATCCTGCAAAATCAAGTTTGGGAACTCTTACAACAAATAGAAACCGTTAATCAAG AACCTATTTCTATTAATACATCAGAACAAGAAGGAACATTTTTTTCCTTTTCAGATATTCTCGAAAATTTAGATAAAATA GATGCTAAAAATGATACGTCCCAAGCTTTGCCTGAAGAATGGCATACTTTATTAAAGCAGTTACCTAGTCATGAAATTCA AGTATTAAAAATTATAATCGGGCAAGATAATCCCCAAGCATCGATCAAAAAAATTGCTGAAGCTAACATCACTATGCCGA ATTTGCTGATTGATTCTATCAATGAGCGAGCTAATGATACTATTGGTGAATTAATAATTGAAACCGATCTAGACGTACCA AAGATTTACGCAGAACATATAACCAATGTCAGAAATATAGTCGCATTGTATGAACATCTAATAGCTAGATACGCATCCTG A
Upstream 100 bases:
>100_bases ACAAACACTTACAACTAGAGTGACTAACACCAAAATATGAAGAGTAATCATTGGCAACGCTGCTCAGTCAAAAAGCTTAA CTACGCTAAAAATCAGCAAT
Downstream 100 bases:
>100_bases AATTTAATATCCCTAGCTCATCGTAAAATTTTTATAAAAATATGGTGTAATTATTGCCAGAACCTATATACATATAGACT GGAAATTATCCAACAAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MQQVIVSNRFILGIVAFSVSFGLSLVPKWNFSQAFFTGVITVVATYAAALFVDKRRRNYELLLLSSLRKRIQETEGLKSR LAREIEQLETHRSLLYTESQQLKNQILDSRNQRDSLHRDLGIFASQRKQIESELANLKSTICSLEENQIELNNSLSTLAS EKRRLESNHHVCRAEITQLRNQISDLNQEKQELENSITLLGRIKPQLEEKLYELRINIQDLELEKSKQSQILLDTSNEQE SLAANIDYLQIQKTERHNELQQIQNEIFLLQQERDILQNQVWELLQQIETVNQEPISINTSEQEGTFFSFSDILENLDKI DAKNDTSQALPEEWHTLLKQLPSHEIQVLKIIIGQDNPQASIKKIAEANITMPNLLIDSINERANDTIGELIIETDLDVP KIYAEHITNVRNIVALYEHLIARYAS
Sequences:
>Translated_426_residues MQQVIVSNRFILGIVAFSVSFGLSLVPKWNFSQAFFTGVITVVATYAAALFVDKRRRNYELLLLSSLRKRIQETEGLKSR LAREIEQLETHRSLLYTESQQLKNQILDSRNQRDSLHRDLGIFASQRKQIESELANLKSTICSLEENQIELNNSLSTLAS EKRRLESNHHVCRAEITQLRNQISDLNQEKQELENSITLLGRIKPQLEEKLYELRINIQDLELEKSKQSQILLDTSNEQE SLAANIDYLQIQKTERHNELQQIQNEIFLLQQERDILQNQVWELLQQIETVNQEPISINTSEQEGTFFSFSDILENLDKI DAKNDTSQALPEEWHTLLKQLPSHEIQVLKIIIGQDNPQASIKKIAEANITMPNLLIDSINERANDTIGELIIETDLDVP KIYAEHITNVRNIVALYEHLIARYAS >Mature_426_residues MQQVIVSNRFILGIVAFSVSFGLSLVPKWNFSQAFFTGVITVVATYAAALFVDKRRRNYELLLLSSLRKRIQETEGLKSR LAREIEQLETHRSLLYTESQQLKNQILDSRNQRDSLHRDLGIFASQRKQIESELANLKSTICSLEENQIELNNSLSTLAS EKRRLESNHHVCRAEITQLRNQISDLNQEKQELENSITLLGRIKPQLEEKLYELRINIQDLELEKSKQSQILLDTSNEQE SLAANIDYLQIQKTERHNELQQIQNEIFLLQQERDILQNQVWELLQQIETVNQEPISINTSEQEGTFFSFSDILENLDKI DAKNDTSQALPEEWHTLLKQLPSHEIQVLKIIIGQDNPQASIKKIAEANITMPNLLIDSINERANDTIGELIIETDLDVP KIYAEHITNVRNIVALYEHLIARYAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49189; Mature: 49189
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQVIVSNRFILGIVAFSVSFGLSLVPKWNFSQAFFTGVITVVATYAAALFVDKRRRNYE CCCCHHCCHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LLLLSSLRKRIQETEGLKSRLAREIEQLETHRSLLYTESQQLKNQILDSRNQRDSLHRDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH GIFASQRKQIESELANLKSTICSLEENQIELNNSLSTLASEKRRLESNHHVCRAEITQLR HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH NQISDLNQEKQELENSITLLGRIKPQLEEKLYELRINIQDLELEKSKQSQILLDTSNEQE HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCHH SLAANIDYLQIQKTERHNELQQIQNEIFLLQQERDILQNQVWELLQQIETVNQEPISINT HHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC SEQEGTFFSFSDILENLDKIDAKNDTSQALPEEWHTLLKQLPSHEIQVLKIIIGQDNPQA CCCCCCEEEHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHCCCCHHEEEEEEECCCCCHH SIKKIAEANITMPNLLIDSINERANDTIGELIIETDLDVPKIYAEHITNVRNIVALYEHL HHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH IARYAS HHHHCC >Mature Secondary Structure MQQVIVSNRFILGIVAFSVSFGLSLVPKWNFSQAFFTGVITVVATYAAALFVDKRRRNYE CCCCHHCCHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LLLLSSLRKRIQETEGLKSRLAREIEQLETHRSLLYTESQQLKNQILDSRNQRDSLHRDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH GIFASQRKQIESELANLKSTICSLEENQIELNNSLSTLASEKRRLESNHHVCRAEITQLR HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH NQISDLNQEKQELENSITLLGRIKPQLEEKLYELRINIQDLELEKSKQSQILLDTSNEQE HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCHH SLAANIDYLQIQKTERHNELQQIQNEIFLLQQERDILQNQVWELLQQIETVNQEPISINT HHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC SEQEGTFFSFSDILENLDKIDAKNDTSQALPEEWHTLLKQLPSHEIQVLKIIIGQDNPQA CCCCCCEEEHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHCCCCHHEEEEEEECCCCCHH SIKKIAEANITMPNLLIDSINERANDTIGELIIETDLDVPKIYAEHITNVRNIVALYEHL HHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH IARYAS HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA