| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229951
Identifier: 17229951
GI number: 17229951
Start: 2955375
End: 2956703
Strand: Reverse
Name: 17229951
Synonym: all2459
Alternate gene names: NA
Gene position: 2956703-2955375 (Counterclockwise)
Preceding gene: 17229952
Following gene: 17229949
Centisome position: 46.1
GC content: 39.43
Gene sequence:
>1329_bases ATGGCAAAGCTCAAAATCCCGAAAAAAACTTCAACTGCTTTGATTAATTCACTAGGTGCAGGAGTAGTACCCAGATTAGG AGTAGAACACATAGCAGTTGGTCGAGAAAAAGAACTTAAAAGCCTATTACAAAATCTCGATGATATTGCCGAAGGTGTAG CAGCATTTCGTTTTATCATTGGTAACTATGGCGCGGGAAAAAGCTTTATCCTCCAGATGGTTCGTAACCGAGCAATGGAG CAAGGTTTTGTAGTTGGTGATGTTGATTTATCTTCGGAACATCGCCTAGCAGGAAGCAACAATGAAGGTCTAGCAACCTA TCGAGAATTGATGAGTAGCCTTTCCACCAAAACCCGTCCTGATGGTGGTGCGTTAGTTTCAATTCTAGAAGGATGGATTA ACAAAATTCAGCAAGAGGTAGTTAAAGAAACTCAGCTACGTCCCAATGATGAGGGTTTTGATGACCAAGTAGAAGCCAAA ATTCGAGAAGTTGTTCAGTATATAGAAGACTTAGTTCATGGGTTTGATTTTGGTAGCATTATTGTTGCTTATTGGCGTGG CTACCGCTTAGACGATGATGATTTAAAAAATTCTGCACTGCGTTGGTTACGGGGAGAATTTAATACTAAAACTGAAGCCA GGACAGCTTTAGGCGTAAGGGTAATTATTGATGATGATAGTTGGTATGACTATATTAAACTCTTAGCTAAATTCGTGGCA GAGATTGGTTATAAAGGATTGCTGATTTTAATGGATGAAGCAGTGAACCTCTACCAAATATCTACTACAGTTACTCGTGA GAAGAACTATAACAGATTACTAGCAATGTTTAATGACACTATGCAGTGTAAAGCAGAACATTTAGGTATTGTTATAGGTG GGACAACAAAGTTTTTAGAAGACCCGAATCGAGGACTTTTTGCAGACCAAGCTTGGCGTAGACGCACAAAAGAGAGCCGC TTTGTGCAACAAAGCGATATACAAGAGTTTATTGGGCCAGTCATCCGCCTTAATCCTTTAAGTGAAGCAGAAATTCTGAC ACTTTTGCAACGTTTAACGGAAATTCACGCCCTCCATTTTGGTTATGACAAGATTTTGACCAACAAGGAATTACAAGAAT TTGTCAAGGAAATCGTCGGTCGTTTAGGCGCAGAAGCCTTATTAACACCAGGAGAAATTGTTAGGGATTTTATTAGTGTG TTGAACATCCTACACCACAATCAAAACATTAAGTTTAGCGAGCTAGTTCATAGTTCTAGTTTTAAACCTACTGCTGTGGG TCAAGATATCGGTGTAGATGAAGATAATGCAGCTGAATTTAGCTTGTGA
Upstream 100 bases:
>100_bases ACAACATACAATAAAAAGCGGCTAGGGACTAGAGACTAATAAATTTAAATCCCCACTCATCGCTATAAAATTGGCATCGA TATCCCGTACAGAAAAATAC
Downstream 100 bases:
>100_bases TTTTGAAGTTTTATTCGATATTAAGGATTTGACAATAAAAATTTAAATAATAAAAAGGGCTTCAAGACTAATATTTATCT GAAACCCCTTTTATTATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MAKLKIPKKTSTALINSLGAGVVPRLGVEHIAVGREKELKSLLQNLDDIAEGVAAFRFIIGNYGAGKSFILQMVRNRAME QGFVVGDVDLSSEHRLAGSNNEGLATYRELMSSLSTKTRPDGGALVSILEGWINKIQQEVVKETQLRPNDEGFDDQVEAK IREVVQYIEDLVHGFDFGSIIVAYWRGYRLDDDDLKNSALRWLRGEFNTKTEARTALGVRVIIDDDSWYDYIKLLAKFVA EIGYKGLLILMDEAVNLYQISTTVTREKNYNRLLAMFNDTMQCKAEHLGIVIGGTTKFLEDPNRGLFADQAWRRRTKESR FVQQSDIQEFIGPVIRLNPLSEAEILTLLQRLTEIHALHFGYDKILTNKELQEFVKEIVGRLGAEALLTPGEIVRDFISV LNILHHNQNIKFSELVHSSSFKPTAVGQDIGVDEDNAAEFSL
Sequences:
>Translated_442_residues MAKLKIPKKTSTALINSLGAGVVPRLGVEHIAVGREKELKSLLQNLDDIAEGVAAFRFIIGNYGAGKSFILQMVRNRAME QGFVVGDVDLSSEHRLAGSNNEGLATYRELMSSLSTKTRPDGGALVSILEGWINKIQQEVVKETQLRPNDEGFDDQVEAK IREVVQYIEDLVHGFDFGSIIVAYWRGYRLDDDDLKNSALRWLRGEFNTKTEARTALGVRVIIDDDSWYDYIKLLAKFVA EIGYKGLLILMDEAVNLYQISTTVTREKNYNRLLAMFNDTMQCKAEHLGIVIGGTTKFLEDPNRGLFADQAWRRRTKESR FVQQSDIQEFIGPVIRLNPLSEAEILTLLQRLTEIHALHFGYDKILTNKELQEFVKEIVGRLGAEALLTPGEIVRDFISV LNILHHNQNIKFSELVHSSSFKPTAVGQDIGVDEDNAAEFSL >Mature_441_residues AKLKIPKKTSTALINSLGAGVVPRLGVEHIAVGREKELKSLLQNLDDIAEGVAAFRFIIGNYGAGKSFILQMVRNRAMEQ GFVVGDVDLSSEHRLAGSNNEGLATYRELMSSLSTKTRPDGGALVSILEGWINKIQQEVVKETQLRPNDEGFDDQVEAKI REVVQYIEDLVHGFDFGSIIVAYWRGYRLDDDDLKNSALRWLRGEFNTKTEARTALGVRVIIDDDSWYDYIKLLAKFVAE IGYKGLLILMDEAVNLYQISTTVTREKNYNRLLAMFNDTMQCKAEHLGIVIGGTTKFLEDPNRGLFADQAWRRRTKESRF VQQSDIQEFIGPVIRLNPLSEAEILTLLQRLTEIHALHFGYDKILTNKELQEFVKEIVGRLGAEALLTPGEIVRDFISVL NILHHNQNIKFSELVHSSSFKPTAVGQDIGVDEDNAAEFSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49717; Mature: 49586
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLKIPKKTSTALINSLGAGVVPRLGVEHIAVGREKELKSLLQNLDDIAEGVAAFRFII CCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH GNYGAGKSFILQMVRNRAMEQGFVVGDVDLSSEHRLAGSNNEGLATYRELMSSLSTKTRP HCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC DGGALVSILEGWINKIQQEVVKETQLRPNDEGFDDQVEAKIREVVQYIEDLVHGFDFGSI CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH IVAYWRGYRLDDDDLKNSALRWLRGEFNTKTEARTALGVRVIIDDDSWYDYIKLLAKFVA HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHEEEEEEECCCHHHHHHHHHHHHH EIGYKGLLILMDEAVNLYQISTTVTREKNYNRLLAMFNDTMQCKAEHLGIVIGGTTKFLE HCCCCCEEEEEECCCCEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEECCCHHHHC DPNRGLFADQAWRRRTKESRFVQQSDIQEFIGPVIRLNPLSEAEILTLLQRLTEIHALHF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHEECCCCCHHHHHHHHHHHHHHHHHHH GYDKILTNKELQEFVKEIVGRLGAEALLTPGEIVRDFISVLNILHHNQNIKFSELVHSSS HHHHHHCCHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC FKPTAVGQDIGVDEDNAAEFSL CCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AKLKIPKKTSTALINSLGAGVVPRLGVEHIAVGREKELKSLLQNLDDIAEGVAAFRFII CCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH GNYGAGKSFILQMVRNRAMEQGFVVGDVDLSSEHRLAGSNNEGLATYRELMSSLSTKTRP HCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC DGGALVSILEGWINKIQQEVVKETQLRPNDEGFDDQVEAKIREVVQYIEDLVHGFDFGSI CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH IVAYWRGYRLDDDDLKNSALRWLRGEFNTKTEARTALGVRVIIDDDSWYDYIKLLAKFVA HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHEEEEEEECCCHHHHHHHHHHHHH EIGYKGLLILMDEAVNLYQISTTVTREKNYNRLLAMFNDTMQCKAEHLGIVIGGTTKFLE HCCCCCEEEEEECCCCEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEECCCHHHHC DPNRGLFADQAWRRRTKESRFVQQSDIQEFIGPVIRLNPLSEAEILTLLQRLTEIHALHF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHEECCCCCHHHHHHHHHHHHHHHHHHH GYDKILTNKELQEFVKEIVGRLGAEALLTPGEIVRDFISVLNILHHNQNIKFSELVHSSS HHHHHHCCHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC FKPTAVGQDIGVDEDNAAEFSL CCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA