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The map label for this gene is 17229949

Identifier: 17229949

GI number: 17229949

Start: 2952941

End: 2953438

Strand: Reverse

Name: 17229949

Synonym: all2457

Alternate gene names: NA

Gene position: 2953438-2952941 (Counterclockwise)

Preceding gene: 17229951

Following gene: 17229948

Centisome position: 46.05

GC content: 47.59

Gene sequence:

>498_bases
ATGGGTAAGGTTTTAGTCCTAAACGCCTCTTACGAACCGCTCAATATAACGAGCTGGCGACGCGCTGTAGTTCTGTTAAT
CAAAGGCAAAGCAGAACGCGTTGAACATAACGGTAGGTTCCTTTACTCGGACTTTCCGTTACCAACTGTAATCCGGTTGC
GTCATTACGTCCGCGTTCCGTATAAAGAAATTCCTCTGACCCGTCGCAATATATTGCATCGTGACGGACATACTTGCCAA
TACTGTGGCTATACCGGGGACGAATTGACACTGGATCATGTAAATCCGCGATCGCGCGGCGGTGGCGATAGCTGGGAAAA
TATTGTAACGGCTTGCGTGCGTTGCAATGTCAAAAAAGGCAGTCGCACACCCCAAGAGGCACGTATGCCTTTGCGCCATC
TTCCTCGTCAACCCTATAGCAGTCTCTATTTTGAGGTCAGCAAGCATCTCAAAAGTGGATTGCATCAAGAGTGGCAAAAA
TATGTTATAGGACTTTGA

Upstream 100 bases:

>100_bases
TCAATTACTCAATTATTGCGGAAGTATACTTTAACCTCCTCTCCCAAGAAGAGGAAAATCGTGTTAATATATGTAAAACT
AATACCTTGAGCGCTGATCA

Downstream 100 bases:

>100_bases
CACTAACACAGTAACCTTCAATACCCAGTTGTTTTGTCACCTAAAAGTAGGTGTTATGTCTACTTGTCTATTTGATTGCA
CTTTATCAGCCTGATTTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; Restriction Endonuclease; HNH Endonuclease Domain-Containing Protein; HNH Endonuclease Domain Protein; Hnh Endonuclease; HNH Nuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Nuclease; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MGKVLVLNASYEPLNITSWRRAVVLLIKGKAERVEHNGRFLYSDFPLPTVIRLRHYVRVPYKEIPLTRRNILHRDGHTCQ
YCGYTGDELTLDHVNPRSRGGGDSWENIVTACVRCNVKKGSRTPQEARMPLRHLPRQPYSSLYFEVSKHLKSGLHQEWQK
YVIGL

Sequences:

>Translated_165_residues
MGKVLVLNASYEPLNITSWRRAVVLLIKGKAERVEHNGRFLYSDFPLPTVIRLRHYVRVPYKEIPLTRRNILHRDGHTCQ
YCGYTGDELTLDHVNPRSRGGGDSWENIVTACVRCNVKKGSRTPQEARMPLRHLPRQPYSSLYFEVSKHLKSGLHQEWQK
YVIGL
>Mature_164_residues
GKVLVLNASYEPLNITSWRRAVVLLIKGKAERVEHNGRFLYSDFPLPTVIRLRHYVRVPYKEIPLTRRNILHRDGHTCQY
CGYTGDELTLDHVNPRSRGGGDSWENIVTACVRCNVKKGSRTPQEARMPLRHLPRQPYSSLYFEVSKHLKSGLHQEWQKY
VIGL

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19152; Mature: 19021

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKVLVLNASYEPLNITSWRRAVVLLIKGKAERVEHNGRFLYSDFPLPTVIRLRHYVRVP
CCCEEEEECCCCCCCCCCHHEEEEEEECCCHHHHHCCCCEEEECCCCHHHHHHHHHHCCC
YKEIPLTRRNILHRDGHTCQYCGYTGDELTLDHVNPRSRGGGDSWENIVTACVRCNVKKG
HHHCCCHHHHHHHCCCCEEEECCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCC
SRTPQEARMPLRHLPRQPYSSLYFEVSKHLKSGLHQEWQKYVIGL
CCCCHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GKVLVLNASYEPLNITSWRRAVVLLIKGKAERVEHNGRFLYSDFPLPTVIRLRHYVRVP
CCEEEEECCCCCCCCCCHHEEEEEEECCCHHHHHCCCCEEEECCCCHHHHHHHHHHCCC
YKEIPLTRRNILHRDGHTCQYCGYTGDELTLDHVNPRSRGGGDSWENIVTACVRCNVKKG
HHHCCCHHHHHHHCCCCEEEECCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCC
SRTPQEARMPLRHLPRQPYSSLYFEVSKHLKSGLHQEWQKYVIGL
CCCCHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA