| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229873
Identifier: 17229873
GI number: 17229873
Start: 2865389
End: 2865844
Strand: Reverse
Name: 17229873
Synonym: all2381
Alternate gene names: NA
Gene position: 2865844-2865389 (Counterclockwise)
Preceding gene: 17229874
Following gene: 17229872
Centisome position: 44.68
GC content: 41.67
Gene sequence:
>456_bases ATGTCTAACTGGCTAGAACATAGCGTACAGGTAGAAGTGGAAGCCCCTATAGATTTAGTATGGGGGTTATGGGCTGACTT GGAACAAATGCCTAATTGGATGAAGTGGATTGATTCTGTCAAAGTTCCACCAGAAAATCCTGATCTATCACTTTGGAAAC TCAATACTGGTGGACTGGAATTTACCTGGAAATCTCGCATTACCAAGGTTATTACCAACCAAATTATTCAATGGGAATCG ATTGATGGTCTGCCCAATCAAGGCGCTATCCGCTTTTACGATCGCCACGGTCATAGTATCGTCAAGATGACTATCTCCTA TGCTATCCCTGGCTTTCTAGGCAAAATCATGGATAATTTGTTTTTGGGTAAGGCTGTGGAATCGACAATTCAAGCTGATT TAGAAAGGTTTAGGGAGTATGCCCTGAATCTTCATCAGTCATCAGTTAATCGTTGA
Upstream 100 bases:
>100_bases GCAACAGTTTCAGGACGGCGGGCGGCAAAAGTCATCCTAGATAATATTAAAAAATAGAGTTAGAACTGCTAATCTAATCA AATCTCAAATCCGAAATAGA
Downstream 100 bases:
>100_bases AAAAGTGTAGAGACGCGACAATTGCGTCTCTATTACGTAGTGACTGAAACAGTTAGTAGTTACGTTAATGCCCTGCTAAG GGACTTCCAACTAAAAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein; Streptomyces Cyclase/Dehydrase Superfamily; Involved In Polyketide Synthesis; Streptomyces Cyclase/Dehydrase; Polyketide Cyclase / Dehydrase Family Protein
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSNWLEHSVQVEVEAPIDLVWGLWADLEQMPNWMKWIDSVKVPPENPDLSLWKLNTGGLEFTWKSRITKVITNQIIQWES IDGLPNQGAIRFYDRHGHSIVKMTISYAIPGFLGKIMDNLFLGKAVESTIQADLERFREYALNLHQSSVNR
Sequences:
>Translated_151_residues MSNWLEHSVQVEVEAPIDLVWGLWADLEQMPNWMKWIDSVKVPPENPDLSLWKLNTGGLEFTWKSRITKVITNQIIQWES IDGLPNQGAIRFYDRHGHSIVKMTISYAIPGFLGKIMDNLFLGKAVESTIQADLERFREYALNLHQSSVNR >Mature_150_residues SNWLEHSVQVEVEAPIDLVWGLWADLEQMPNWMKWIDSVKVPPENPDLSLWKLNTGGLEFTWKSRITKVITNQIIQWESI DGLPNQGAIRFYDRHGHSIVKMTISYAIPGFLGKIMDNLFLGKAVESTIQADLERFREYALNLHQSSVNR
Specific function: Unknown
COG id: COG5637
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17451; Mature: 17320
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNWLEHSVQVEVEAPIDLVWGLWADLEQMPNWMKWIDSVKVPPENPDLSLWKLNTGGLE CCCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEEEEEECCCCEE FTWKSRITKVITNQIIQWESIDGLPNQGAIRFYDRHGHSIVKMTISYAIPGFLGKIMDNL EEHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHH FLGKAVESTIQADLERFREYALNLHQSSVNR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SNWLEHSVQVEVEAPIDLVWGLWADLEQMPNWMKWIDSVKVPPENPDLSLWKLNTGGLE CCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEEEEEECCCCEE FTWKSRITKVITNQIIQWESIDGLPNQGAIRFYDRHGHSIVKMTISYAIPGFLGKIMDNL EEHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHH FLGKAVESTIQADLERFREYALNLHQSSVNR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA