| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229872
Identifier: 17229872
GI number: 17229872
Start: 2864712
End: 2864879
Strand: Reverse
Name: 17229872
Synonym: asl2380
Alternate gene names: NA
Gene position: 2864879-2864712 (Counterclockwise)
Preceding gene: 17229873
Following gene: 17229871
Centisome position: 44.67
GC content: 38.69
Gene sequence:
>168_bases GTGGCGTTGGGCATTGCCCACCAAAACCATGAGTCGTTGGGCAATGTCCACCCTACTGATACTGAGAATTTTATGCGTAA GCGCAGGCTACGCCAACAGAAATCAAATCGGATTCCGATATTAATCAAATTTAAACTAATTAAAACAGATTTTTTTATTA AAAGCTAA
Upstream 100 bases:
>100_bases GATACTGACGTTTTTTTCATAACTATAGGACTCATAATTGATTTTTGAAATATACGTAGGGGAGCCACTGCGCTCTTACG GGTTTCCAGGCTTAGAGCAA
Downstream 100 bases:
>100_bases ATATGGAGCGAACCATATTAACTTTCAAAACTTTGATATTTTTTATACTGTAACAATCCTTGGGAAGAAATTAACTCCTA GAGTTGCTTAGTTTGTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 55; Mature: 54
Protein sequence:
>55_residues MALGIAHQNHESLGNVHPTDTENFMRKRRLRQQKSNRIPILIKFKLIKTDFFIKS
Sequences:
>Translated_55_residues MALGIAHQNHESLGNVHPTDTENFMRKRRLRQQKSNRIPILIKFKLIKTDFFIKS >Mature_54_residues ALGIAHQNHESLGNVHPTDTENFMRKRRLRQQKSNRIPILIKFKLIKTDFFIKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6519; Mature: 6388
Theoretical pI: Translated: 11.70; Mature: 11.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALGIAHQNHESLGNVHPTDTENFMRKRRLRQQKSNRIPILIKFKLIKTDFFIKS CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEECC >Mature Secondary Structure ALGIAHQNHESLGNVHPTDTENFMRKRRLRQQKSNRIPILIKFKLIKTDFFIKS CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA