| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229841
Identifier: 17229841
GI number: 17229841
Start: 2830757
End: 2832373
Strand: Reverse
Name: 17229841
Synonym: all2349
Alternate gene names: NA
Gene position: 2832373-2830757 (Counterclockwise)
Preceding gene: 17229844
Following gene: 17229839
Centisome position: 44.16
GC content: 41.68
Gene sequence:
>1617_bases ATGGGGGCAGGGACTATGGTAACGCTAAATCATACAGAATTAGAATCAGTTGATCAGTTTCGTAGTCTGCAATGTACTTT ACGCGATCGCTGGAAAACTATCGAGCAATTTGATACTGGTGAGGCGGATATTGTCGTTATTCCTTCCTTAAGTATTGACC AGCGCGAAATTCAAAAAGTTGAAGGTTGCGAACATTATGAAGAAAGATTACTTTTTTCTTTGATGCGGTTACGAAATCCC CGTACTAGATTGATTTATGTAACATCAACTCCATTACATCCCAGCATTATCGATTATTATTTGCAACTTTTGCCAGGTAT TCCATTTTCTCATGCGCGTAATCGCTTGCTACTGCTTTCGACTTATGATTCTTCTCCTAAACCTCTAAGTCAAAAAATCT TAGAACGTCCCCGTTTAATGGAAAGAATTCGGCAAGCCTTGAGGTTAGAAAAATCATTTATAATTTGCTACAACTCGACA GATTTAGAAGCAGAATTATCACTCAAATTAAATGTACCATTGTATGCTGCTGCACCAGATTTGCAGATTTGGGGGACAAA AAGCGGTAGCCGGCAAATCTTTGCAGAAAGTGGTGTACCCCATCCTGATGGGAGTGAACTGGTTTGGCACTATAAAGATT TAGCAGTAGTGGCTAGTGATTTGTGGGAACGTGAACCTTCCTTAAAACGGATGGTAGTCAAATTAAATGAAGGGATTTCT GGAGAAGGAAACGCCTTGTTAGACTTGCAGCCAATTATGAATGTTGCGCCAGGACAAGGATCGACAGCAGAAAGAGTAGC AGCAATTAGCGATCGCTTTTCTTCTTTGCGCTTTCAAGCCAAGCAAGAAAATTGGCAAAACTTTTCGGGACGAATTACCG AACTAGGGGCAATTGTTGAAGCATTTGTGGAAGGGGAAATTAAGCGATCGCCTAGTGTGCAAGGACGGATCACTCCCACC GGTGAAGTAGAAATTCTCTCAACTCACGACCAAATCCTTGGCGGCCCAGACGGTCAAATTTATTTGGGTTGTAGCTTCCC GGCTGATGAACGCTATCGTTTGCAATTACAACAGTTAGGTTTGCAAGTCGGCAGAAAGCTGGCAGAAAAAGGAGCTTTAG AAAGATTTGGTGTAGATTTTATCACCGTTGACCAAGGTAACGGTCAATGGGATATTCAAGCAATTGAAATTAATCTCCGC AAAGGTGGGACAACCCATCCTTTCATGACCTTAAAATTATTGACTAACGGTCGTTATGAGCTATCGACTGGTTTATTTTA TAGTCAACAAGGTCGCCCCAAATACTACATCGCTACAGACAACCTACAAAAAGACCGCTATCGTGGATTATTACCCAACG ATTTAATGGATATCATCGCCCATCATAGATTGCACTTCGATAGCTGCACGGAAACTGGGACGGTGTTTCACCTGATGGGT TGTCTGTCTCAGTTTGGCAAGTTAGGATTAACTAGCATTGGTGATTCTCCCCAACAAGCAGAAGATATCTACAACAAAGT TGTCAAAGTTTTGGATGAGGAAACCCGCGTTAATAATAAACAGTTTCCCCTGTTTTCTGATTACACCTTCCCCAATTCCT GGGATGGATATAGTTAA
Upstream 100 bases:
>100_bases TACTATTACGGCAGTAGATACAGTCAAGAACTATTGCATAACAGCTATATATGACTTTCTTTAGGATATATAAGAATAAT CAGGCAGTATTGGGGAGCAA
Downstream 100 bases:
>100_bases TTTGTCATTCCCAATTATCTTGTAGCTTGATTTTGCAACCACCCTACCAAATCGGCGATAGTCGAGAAATCGAACAAAGC CTCAGCTAAAGCTTCTAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 538; Mature: 537
Protein sequence:
>538_residues MGAGTMVTLNHTELESVDQFRSLQCTLRDRWKTIEQFDTGEADIVVIPSLSIDQREIQKVEGCEHYEERLLFSLMRLRNP RTRLIYVTSTPLHPSIIDYYLQLLPGIPFSHARNRLLLLSTYDSSPKPLSQKILERPRLMERIRQALRLEKSFIICYNST DLEAELSLKLNVPLYAAAPDLQIWGTKSGSRQIFAESGVPHPDGSELVWHYKDLAVVASDLWEREPSLKRMVVKLNEGIS GEGNALLDLQPIMNVAPGQGSTAERVAAISDRFSSLRFQAKQENWQNFSGRITELGAIVEAFVEGEIKRSPSVQGRITPT GEVEILSTHDQILGGPDGQIYLGCSFPADERYRLQLQQLGLQVGRKLAEKGALERFGVDFITVDQGNGQWDIQAIEINLR KGGTTHPFMTLKLLTNGRYELSTGLFYSQQGRPKYYIATDNLQKDRYRGLLPNDLMDIIAHHRLHFDSCTETGTVFHLMG CLSQFGKLGLTSIGDSPQQAEDIYNKVVKVLDEETRVNNKQFPLFSDYTFPNSWDGYS
Sequences:
>Translated_538_residues MGAGTMVTLNHTELESVDQFRSLQCTLRDRWKTIEQFDTGEADIVVIPSLSIDQREIQKVEGCEHYEERLLFSLMRLRNP RTRLIYVTSTPLHPSIIDYYLQLLPGIPFSHARNRLLLLSTYDSSPKPLSQKILERPRLMERIRQALRLEKSFIICYNST DLEAELSLKLNVPLYAAAPDLQIWGTKSGSRQIFAESGVPHPDGSELVWHYKDLAVVASDLWEREPSLKRMVVKLNEGIS GEGNALLDLQPIMNVAPGQGSTAERVAAISDRFSSLRFQAKQENWQNFSGRITELGAIVEAFVEGEIKRSPSVQGRITPT GEVEILSTHDQILGGPDGQIYLGCSFPADERYRLQLQQLGLQVGRKLAEKGALERFGVDFITVDQGNGQWDIQAIEINLR KGGTTHPFMTLKLLTNGRYELSTGLFYSQQGRPKYYIATDNLQKDRYRGLLPNDLMDIIAHHRLHFDSCTETGTVFHLMG CLSQFGKLGLTSIGDSPQQAEDIYNKVVKVLDEETRVNNKQFPLFSDYTFPNSWDGYS >Mature_537_residues GAGTMVTLNHTELESVDQFRSLQCTLRDRWKTIEQFDTGEADIVVIPSLSIDQREIQKVEGCEHYEERLLFSLMRLRNPR TRLIYVTSTPLHPSIIDYYLQLLPGIPFSHARNRLLLLSTYDSSPKPLSQKILERPRLMERIRQALRLEKSFIICYNSTD LEAELSLKLNVPLYAAAPDLQIWGTKSGSRQIFAESGVPHPDGSELVWHYKDLAVVASDLWEREPSLKRMVVKLNEGISG EGNALLDLQPIMNVAPGQGSTAERVAAISDRFSSLRFQAKQENWQNFSGRITELGAIVEAFVEGEIKRSPSVQGRITPTG EVEILSTHDQILGGPDGQIYLGCSFPADERYRLQLQQLGLQVGRKLAEKGALERFGVDFITVDQGNGQWDIQAIEINLRK GGTTHPFMTLKLLTNGRYELSTGLFYSQQGRPKYYIATDNLQKDRYRGLLPNDLMDIIAHHRLHFDSCTETGTVFHLMGC LSQFGKLGLTSIGDSPQQAEDIYNKVVKVLDEETRVNNKQFPLFSDYTFPNSWDGYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI72534720, Length=575, Percent_Identity=20, Blast_Score=89, Evalue=9e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60844; Mature: 60713
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAGTMVTLNHTELESVDQFRSLQCTLRDRWKTIEQFDTGEADIVVIPSLSIDQREIQKV CCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHH EGCEHYEERLLFSLMRLRNPRTRLIYVTSTPLHPSIIDYYLQLLPGIPFSHARNRLLLLS HCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCHHCCCEEEEEE TYDSSPKPLSQKILERPRLMERIRQALRLEKSFIICYNSTDLEAELSLKLNVPLYAAAPD ECCCCCCHHHHHHHHCHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCEEECCCC LQIWGTKSGSRQIFAESGVPHPDGSELVWHYKDLAVVASDLWEREPSLKRMVVKLNEGIS EEEEECCCCCCEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC GEGNALLDLQPIMNVAPGQGSTAERVAAISDRFSSLRFQAKQENWQNFSGRITELGAIVE CCCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH AFVEGEIKRSPSVQGRITPTGEVEILSTHDQILGGPDGQIYLGCSFPADERYRLQLQQLG HHHCCCCCCCCCCCEEECCCCCEEEEECCHHHCCCCCCEEEEEECCCCCCHHHHHHHHHH LQVGRKLAEKGALERFGVDFITVDQGNGQWDIQAIEINLRKGGTTHPFMTLKLLTNGRYE HHHHHHHHHHCCHHHHCCCEEEEECCCCEEEEEEEEEEEECCCCCCCEEEEEEEECCCEE LSTGLFYSQQGRPKYYIATDNLQKDRYRGLLPNDLMDIIAHHRLHFDSCTETGTVFHLMG EECCEEECCCCCEEEEEECCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH CLSQFGKLGLTSIGDSPQQAEDIYNKVVKVLDEETRVNNKQFPLFSDYTFPNSWDGYS HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCC >Mature Secondary Structure GAGTMVTLNHTELESVDQFRSLQCTLRDRWKTIEQFDTGEADIVVIPSLSIDQREIQKV CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHH EGCEHYEERLLFSLMRLRNPRTRLIYVTSTPLHPSIIDYYLQLLPGIPFSHARNRLLLLS HCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCHHCCCEEEEEE TYDSSPKPLSQKILERPRLMERIRQALRLEKSFIICYNSTDLEAELSLKLNVPLYAAAPD ECCCCCCHHHHHHHHCHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCEEECCCC LQIWGTKSGSRQIFAESGVPHPDGSELVWHYKDLAVVASDLWEREPSLKRMVVKLNEGIS EEEEECCCCCCEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC GEGNALLDLQPIMNVAPGQGSTAERVAAISDRFSSLRFQAKQENWQNFSGRITELGAIVE CCCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH AFVEGEIKRSPSVQGRITPTGEVEILSTHDQILGGPDGQIYLGCSFPADERYRLQLQQLG HHHCCCCCCCCCCCEEECCCCCEEEEECCHHHCCCCCCEEEEEECCCCCCHHHHHHHHHH LQVGRKLAEKGALERFGVDFITVDQGNGQWDIQAIEINLRKGGTTHPFMTLKLLTNGRYE HHHHHHHHHHCCHHHHCCCEEEEECCCCEEEEEEEEEEEECCCCCCCEEEEEEEECCCEE LSTGLFYSQQGRPKYYIATDNLQKDRYRGLLPNDLMDIIAHHRLHFDSCTETGTVFHLMG EECCEEECCCCCEEEEEECCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH CLSQFGKLGLTSIGDSPQQAEDIYNKVVKVLDEETRVNNKQFPLFSDYTFPNSWDGYS HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA