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The map label for this gene is hetR

Identifier: 17229831

GI number: 17229831

Start: 2821638

End: 2822537

Strand: Direct

Name: hetR

Synonym: alr2339

Alternate gene names: 17229831

Gene position: 2821638-2822537 (Clockwise)

Preceding gene: 17229830

Following gene: 17229837

Centisome position: 43.99

GC content: 48.56

Gene sequence:

>900_bases
ATGAGTAACGACATCGATCTGATCAAGCGTCTTGGCCCCAGTGCAATGGATCAGATCATGCTATATCTGGCTTTTAGCGC
CATGAGGACGAGCGGGCATAGGCATGGAGCATTCTTAGATGCAGCAGCAACGGCGGCTAAGTGTGCCATTTACATGACTT
ATCTAGAGCAAGGACAAAACCTCCGGATGACCGGACATTTGCACCACCTAGAGCCAAAACGGGTCAAAATCATTGTAGAG
GAAGTCAGACAAGCCCTGATGGAGGGCAAACTGCTCAAGACCTTAGGTTCCCAAGAACCCCGGTATTTGATTCAGTTTCC
CTATGTCTGGATGGAACAGTACCCTTGGATACCAGGGCGATCGCGCATTCCCGGTACAAGCCTCACAAGTGAAGAAAAAA
GACAAATTGAGCATAAGTTACCCAGCAATCTTCCCGACGCTCAGTTAGTTACTTCCTTTGAGTTTTTGGAGTTGATCGAA
TTTCTCCATAAGCGATCGCAAGAGGATCTGCCCCCAGAACATCGCATGGAGTTAAGCGAAGCCCTGGCAGAGCATATCAA
GCGTCGTCTGCTTTACTCTGGCACGGTGACAAGAATTGATTCTCCTTGGGGAATGCCCTTCTATGCCCTGACTCGTCCCT
TCTATGCCCCAGCAGACGACCAAGAGCGGACTTATATTATGGTGGAAGATACCGCTCGGTATTTCCGCATGATGAAAGAC
TGGGCAGAAAAGCGGCCAAACGCTATGCGAGCCTTAGAAGAACTCGATGTGCCACCAGAGCGCTGGGATGAAGCCATGCA
GGAACTGGATGAAATTATCCGTACCTGGGCTGATAAATATCACCAAGTAGGTGGTATCCCCATGATTTTACAAATGGTGT
TTGGTAGAAAAGAAGATTAA

Upstream 100 bases:

>100_bases
AAACATCATAAGCATTTTGGTGTCACAATCTCACCCCCCTATGGGTGTATACCAACTACTTTTTTTAGACTAATAAGCGT
GCTATTCAACTATTTGTAAT

Downstream 100 bases:

>100_bases
GCACCCAGAGTGAATAAAAGTACTAGTAATGTTTCATTGAGAAACTTATGCTAGTGATGACAAATGACTCGGCGAATTAA
ATTAAATACTTGGCATGGCA

Product: heterocyst differentiation control protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MSNDIDLIKRLGPSAMDQIMLYLAFSAMRTSGHRHGAFLDAAATAAKCAIYMTYLEQGQNLRMTGHLHHLEPKRVKIIVE
EVRQALMEGKLLKTLGSQEPRYLIQFPYVWMEQYPWIPGRSRIPGTSLTSEEKRQIEHKLPSNLPDAQLVTSFEFLELIE
FLHKRSQEDLPPEHRMELSEALAEHIKRRLLYSGTVTRIDSPWGMPFYALTRPFYAPADDQERTYIMVEDTARYFRMMKD
WAEKRPNAMRALEELDVPPERWDEAMQELDEIIRTWADKYHQVGGIPMILQMVFGRKED

Sequences:

>Translated_299_residues
MSNDIDLIKRLGPSAMDQIMLYLAFSAMRTSGHRHGAFLDAAATAAKCAIYMTYLEQGQNLRMTGHLHHLEPKRVKIIVE
EVRQALMEGKLLKTLGSQEPRYLIQFPYVWMEQYPWIPGRSRIPGTSLTSEEKRQIEHKLPSNLPDAQLVTSFEFLELIE
FLHKRSQEDLPPEHRMELSEALAEHIKRRLLYSGTVTRIDSPWGMPFYALTRPFYAPADDQERTYIMVEDTARYFRMMKD
WAEKRPNAMRALEELDVPPERWDEAMQELDEIIRTWADKYHQVGGIPMILQMVFGRKED
>Mature_298_residues
SNDIDLIKRLGPSAMDQIMLYLAFSAMRTSGHRHGAFLDAAATAAKCAIYMTYLEQGQNLRMTGHLHHLEPKRVKIIVEE
VRQALMEGKLLKTLGSQEPRYLIQFPYVWMEQYPWIPGRSRIPGTSLTSEEKRQIEHKLPSNLPDAQLVTSFEFLELIEF
LHKRSQEDLPPEHRMELSEALAEHIKRRLLYSGTVTRIDSPWGMPFYALTRPFYAPADDQERTYIMVEDTARYFRMMKDW
AEKRPNAMRALEELDVPPERWDEAMQELDEIIRTWADKYHQVGGIPMILQMVFGRKED

Specific function: Controls heterocyst differentiation. Has both a protease and a DNA-binding activity

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S48 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): HETR_ANAVT (Q9F5Y3)

Other databases:

- EMBL:   AF301157
- EMBL:   CP000117
- RefSeq:   YP_320679.1
- MEROPS:   S48.001
- GeneID:   3683238
- GenomeReviews:   CP000117_GR
- KEGG:   ava:Ava_0158
- eggNOG:   NOG87551
- HOGENOM:   HBG580887
- OMA:   FLHRRSQ
- ProtClustDB:   PRK13245
- BioCyc:   AVAR240292:AVA_0158-MONOMER
- HAMAP:   MF_00781
- InterPro:   IPR005319

Pfam domain/function: PF03574 Peptidase_S48

EC number: NA

Molecular weight: Translated: 34970; Mature: 34839

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: ACT_SITE 152-152

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNDIDLIKRLGPSAMDQIMLYLAFSAMRTSGHRHGAFLDAAATAAKCAIYMTYLEQGQN
CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
LRMTGHLHHLEPKRVKIIVEEVRQALMEGKLLKTLGSQEPRYLIQFPYVWMEQYPWIPGR
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHCCCCCCC
SRIPGTSLTSEEKRQIEHKLPSNLPDAQLVTSFEFLELIEFLHKRSQEDLPPEHRMELSE
CCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ALAEHIKRRLLYSGTVTRIDSPWGMPFYALTRPFYAPADDQERTYIMVEDTARYFRMMKD
HHHHHHHHHHHHCCCCEEECCCCCCCHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHH
WAEKRPNAMRALEELDVPPERWDEAMQELDEIIRTWADKYHQVGGIPMILQMVFGRKED
HHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
SNDIDLIKRLGPSAMDQIMLYLAFSAMRTSGHRHGAFLDAAATAAKCAIYMTYLEQGQN
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
LRMTGHLHHLEPKRVKIIVEEVRQALMEGKLLKTLGSQEPRYLIQFPYVWMEQYPWIPGR
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHCCCCCCC
SRIPGTSLTSEEKRQIEHKLPSNLPDAQLVTSFEFLELIEFLHKRSQEDLPPEHRMELSE
CCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ALAEHIKRRLLYSGTVTRIDSPWGMPFYALTRPFYAPADDQERTYIMVEDTARYFRMMKD
HHHHHHHHHHHHCCCCEEECCCCCCCHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHH
WAEKRPNAMRALEELDVPPERWDEAMQELDEIIRTWADKYHQVGGIPMILQMVFGRKED
HHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA