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The map label for this gene is 17229837

Identifier: 17229837

GI number: 17229837

Start: 2828054

End: 2828611

Strand: Direct

Name: 17229837

Synonym: alr2345

Alternate gene names: NA

Gene position: 2828054-2828611 (Clockwise)

Preceding gene: 17229831

Following gene: 17229838

Centisome position: 44.09

GC content: 43.91

Gene sequence:

>558_bases
ATGTCTTTTAAATCTGTTAATGATATTTTAGGTGTTCTGGAAAAGCAGGCGAAATGGCAACAACAACCATTTCAGCAAGT
ATGCCAGTTTTGGGCAGAAGTTGTAGGTAGTGCCATTGCTTCCCAAACTCAACCTTTATCACTACAGCGTGATGTTTTAC
GCGTAGCAACTTCTAGCGCCGCTTGGGCGCAAAATTTGACATTTAGCCGTCAAACGTTACTTTTAAAGTTAAATCAAAAG
TTATCTACCCCTCTTGTAGATTTGCGTTTTTCTACTGCTGGTTGGCAACGCCATCCACAGAAGGGAAAAGCACTACCAAT
AGCGTTACATAGCCAACATCCCAGTTATTTGGGTGATGTCAATGAAGACCAGGGTCAAGTAACAGCAGTTAATCAGGATG
TGAATCAGGTTTTTGGTCATTGGGCCAAGACAAGGCAGAGGCGATCGCAAAATTTACCCCTTTGTCCTCAATGTCAATGC
CCTACGCCACCAGGCGAACTCCAGCGTTGGGGGGTTTGTGGGTTTTGTAGCGTTAAGCAGTTGCCCCAAAATATGTAA

Upstream 100 bases:

>100_bases
CTCTTCTCTACGAGATGCTAGTTGTGTACCAATGCTAAGGAAAATTGTCTATTAGTATAGATCCCAGAACCAAGCTCAAT
TCTGGCTGTTATTTGGCAAG

Downstream 100 bases:

>100_bases
TTATTTTCTGTATAAAAATGCTGTTTTTATATAAAATTGAAGCTAGTTGTCAACGTCACTTTTTTACTAAAAAGAACCTG
ATAACCTTACTGAGACCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MSFKSVNDILGVLEKQAKWQQQPFQQVCQFWAEVVGSAIASQTQPLSLQRDVLRVATSSAAWAQNLTFSRQTLLLKLNQK
LSTPLVDLRFSTAGWQRHPQKGKALPIALHSQHPSYLGDVNEDQGQVTAVNQDVNQVFGHWAKTRQRRSQNLPLCPQCQC
PTPPGELQRWGVCGFCSVKQLPQNM

Sequences:

>Translated_185_residues
MSFKSVNDILGVLEKQAKWQQQPFQQVCQFWAEVVGSAIASQTQPLSLQRDVLRVATSSAAWAQNLTFSRQTLLLKLNQK
LSTPLVDLRFSTAGWQRHPQKGKALPIALHSQHPSYLGDVNEDQGQVTAVNQDVNQVFGHWAKTRQRRSQNLPLCPQCQC
PTPPGELQRWGVCGFCSVKQLPQNM
>Mature_184_residues
SFKSVNDILGVLEKQAKWQQQPFQQVCQFWAEVVGSAIASQTQPLSLQRDVLRVATSSAAWAQNLTFSRQTLLLKLNQKL
STPLVDLRFSTAGWQRHPQKGKALPIALHSQHPSYLGDVNEDQGQVTAVNQDVNQVFGHWAKTRQRRSQNLPLCPQCQCP
TPPGELQRWGVCGFCSVKQLPQNM

Specific function: Unknown

COG id: COG5512

COG function: function code R; Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20776; Mature: 20645

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFKSVNDILGVLEKQAKWQQQPFQQVCQFWAEVVGSAIASQTQPLSLQRDVLRVATSSA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
AWAQNLTFSRQTLLLKLNQKLSTPLVDLRFSTAGWQRHPQKGKALPIALHSQHPSYLGDV
HHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCC
NEDQGQVTAVNQDVNQVFGHWAKTRQRRSQNLPLCPQCQCPTPPGELQRWGVCGFCSVKQ
CCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHH
LPQNM
CCCCC
>Mature Secondary Structure 
SFKSVNDILGVLEKQAKWQQQPFQQVCQFWAEVVGSAIASQTQPLSLQRDVLRVATSSA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
AWAQNLTFSRQTLLLKLNQKLSTPLVDLRFSTAGWQRHPQKGKALPIALHSQHPSYLGDV
HHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCC
NEDQGQVTAVNQDVNQVFGHWAKTRQRRSQNLPLCPQCQCPTPPGELQRWGVCGFCSVKQ
CCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHH
LPQNM
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA