Click here to switch to the map view.

The map label for this gene is 17229816

Identifier: 17229816

GI number: 17229816

Start: 2801432

End: 2802625

Strand: Direct

Name: 17229816

Synonym: alr2324

Alternate gene names: NA

Gene position: 2801432-2802625 (Clockwise)

Preceding gene: 17229815

Following gene: 17229817

Centisome position: 43.68

GC content: 41.96

Gene sequence:

>1194_bases
ATGTGGTCTTCACAGGGCAAACCAGCTGACACCGGAACCAATGGACAACAGTTGCTCAACACAACTCCAACTAATTGGGA
GCAAGAGTCCGAACGAGAGGGAATATTCCAGCTAATTGATAGCATCTTGCCCTTTGAAGTTTGCCTCTACCACCAGATTT
TGCCTTTAAGGTGCCAAAATGATCGCTTATCACTAGGTATGGTAAATCTAGGAGATAGTGCCGCATTCGATTACGTACAT
CGCATTGTGTCATATATCAACAGCACAATAGAAACTCAAGAAATCGCTGCTGACATTCATCGCGCAATACTTTCTGCTTA
CCTCAACTATAAGAATACATCCACTCCAGAGGTACAACCAGTAGAAAAACCAGAAGCAGAAGAGATTTTAGCCGAGAGTG
TGAACACCACACTTAATCTACCTAACGCCACAACTCCCTCCCCAGAAGTACAGCCGTTACATCAATCTTTTGAGTCATTA
ATAGATGTTTCTGTGCCGTCCCACTCAGAGAAGGATTCTCAAACTACCAATGATTCTCAACAAGTCAGTGTTCAACAAGA
ATCACCCATGCCTCTACTGAGTGATGTAACTGTTTTACAAGTGCAAGCTCCACAACTATTCAGCCCTATTGAATCACTAC
TCAATTTACCCTCTAGGAAGCTATTGGAGGAATTGCTAGGACGAGTTTTAGGTGGGGGGATTGGTCGCTTATATCTGGAA
AGACAACCATATAGAGGAAGAATTATTTGGAGTGACAATGGAGTCTTACAGTCTGTATTGGAAAATTTACCCCTCTCTGT
TTTTCAAGGCGTACTTAATGAATTAAAGCGTTTTGCAGGGTTTCCTCTTAGTACGCTCGCAGAACCACAACAGATTGAGA
AAGAATGCCAATACCAAAACAATAGTTTATTATTACGCATACGTGTAATGCCAGGAATAAATGGCGAAGAGGCCACACTG
CAAGTACTAAGGGGGGCAGCTCTAAAATTTTATCAGCAGCAGCAATTAGATCGTCTGAGTCGAGATGCCATAGGAATTTC
TCAACAACTCAGCTATAAGTTGCATGAATTACATCAACGATTACTGCTGAATCCTCACCTCAAAGCCGAGCAATCAGAGG
CTTTATCTACCCTCACTCGAATAGTTGAAAGCTTAGACCAAAAAGTTAAAACACTGACGGCAAATAATCAATGA

Upstream 100 bases:

>100_bases
CAGTTAATTTGGCTGTAATCCACTGAACTCAGTATATTTATTTACTGCCAAGTGCCGAAGAGCAAAATAGAATATAAAGA
AACACTAAGCAAGCAAACCT

Downstream 100 bases:

>100_bases
CTATCAGACAGAGAATCATCGTGCTGTCAGTAAAACCTCTGATTTCGATCTTTACCATAATTGTTATGTTGTAATGACTA
ACCAGACTATCTTTTACAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MWSSQGKPADTGTNGQQLLNTTPTNWEQESEREGIFQLIDSILPFEVCLYHQILPLRCQNDRLSLGMVNLGDSAAFDYVH
RIVSYINSTIETQEIAADIHRAILSAYLNYKNTSTPEVQPVEKPEAEEILAESVNTTLNLPNATTPSPEVQPLHQSFESL
IDVSVPSHSEKDSQTTNDSQQVSVQQESPMPLLSDVTVLQVQAPQLFSPIESLLNLPSRKLLEELLGRVLGGGIGRLYLE
RQPYRGRIIWSDNGVLQSVLENLPLSVFQGVLNELKRFAGFPLSTLAEPQQIEKECQYQNNSLLLRIRVMPGINGEEATL
QVLRGAALKFYQQQQLDRLSRDAIGISQQLSYKLHELHQRLLLNPHLKAEQSEALSTLTRIVESLDQKVKTLTANNQ

Sequences:

>Translated_397_residues
MWSSQGKPADTGTNGQQLLNTTPTNWEQESEREGIFQLIDSILPFEVCLYHQILPLRCQNDRLSLGMVNLGDSAAFDYVH
RIVSYINSTIETQEIAADIHRAILSAYLNYKNTSTPEVQPVEKPEAEEILAESVNTTLNLPNATTPSPEVQPLHQSFESL
IDVSVPSHSEKDSQTTNDSQQVSVQQESPMPLLSDVTVLQVQAPQLFSPIESLLNLPSRKLLEELLGRVLGGGIGRLYLE
RQPYRGRIIWSDNGVLQSVLENLPLSVFQGVLNELKRFAGFPLSTLAEPQQIEKECQYQNNSLLLRIRVMPGINGEEATL
QVLRGAALKFYQQQQLDRLSRDAIGISQQLSYKLHELHQRLLLNPHLKAEQSEALSTLTRIVESLDQKVKTLTANNQ
>Mature_397_residues
MWSSQGKPADTGTNGQQLLNTTPTNWEQESEREGIFQLIDSILPFEVCLYHQILPLRCQNDRLSLGMVNLGDSAAFDYVH
RIVSYINSTIETQEIAADIHRAILSAYLNYKNTSTPEVQPVEKPEAEEILAESVNTTLNLPNATTPSPEVQPLHQSFESL
IDVSVPSHSEKDSQTTNDSQQVSVQQESPMPLLSDVTVLQVQAPQLFSPIESLLNLPSRKLLEELLGRVLGGGIGRLYLE
RQPYRGRIIWSDNGVLQSVLENLPLSVFQGVLNELKRFAGFPLSTLAEPQQIEKECQYQNNSLLLRIRVMPGINGEEATL
QVLRGAALKFYQQQQLDRLSRDAIGISQQLSYKLHELHQRLLLNPHLKAEQSEALSTLTRIVESLDQKVKTLTANNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44495; Mature: 44495

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWSSQGKPADTGTNGQQLLNTTPTNWEQESEREGIFQLIDSILPFEVCLYHQILPLRCQN
CCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECC
DRLSLGMVNLGDSAAFDYVHRIVSYINSTIETQEIAADIHRAILSAYLNYKNTSTPEVQP
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
VEKPEAEEILAESVNTTLNLPNATTPSPEVQPLHQSFESLIDVSVPSHSEKDSQTTNDSQ
CCCCCHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
QVSVQQESPMPLLSDVTVLQVQAPQLFSPIESLLNLPSRKLLEELLGRVLGGGIGRLYLE
EEEECCCCCCCHHHCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHEEEE
RQPYRGRIIWSDNGVLQSVLENLPLSVFQGVLNELKRFAGFPLSTLAEPQQIEKECQYQN
CCCCCCEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHCCC
NSLLLRIRVMPGINGEEATLQVLRGAALKFYQQQQLDRLSRDAIGISQQLSYKLHELHQR
CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
LLLNPHLKAEQSEALSTLTRIVESLDQKVKTLTANNQ
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MWSSQGKPADTGTNGQQLLNTTPTNWEQESEREGIFQLIDSILPFEVCLYHQILPLRCQN
CCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECC
DRLSLGMVNLGDSAAFDYVHRIVSYINSTIETQEIAADIHRAILSAYLNYKNTSTPEVQP
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
VEKPEAEEILAESVNTTLNLPNATTPSPEVQPLHQSFESLIDVSVPSHSEKDSQTTNDSQ
CCCCCHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
QVSVQQESPMPLLSDVTVLQVQAPQLFSPIESLLNLPSRKLLEELLGRVLGGGIGRLYLE
EEEECCCCCCCHHHCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHEEEE
RQPYRGRIIWSDNGVLQSVLENLPLSVFQGVLNELKRFAGFPLSTLAEPQQIEKECQYQN
CCCCCCEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHCCC
NSLLLRIRVMPGINGEEATLQVLRGAALKFYQQQQLDRLSRDAIGISQQLSYKLHELHQR
CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
LLLNPHLKAEQSEALSTLTRIVESLDQKVKTLTANNQ
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA