| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is yjeE [C]
Identifier: 17229792
GI number: 17229792
Start: 2770300
End: 2770788
Strand: Direct
Name: yjeE [C]
Synonym: alr2300
Alternate gene names: 17229792
Gene position: 2770300-2770788 (Clockwise)
Preceding gene: 17229790
Following gene: 17229796
Centisome position: 43.19
GC content: 38.45
Gene sequence:
>489_bases ATGACTATTGACCAAATGACTATTGACCAAATGACTAAAATTTTTCTTGCAGATAAAGAGTCAACACTCAACTTAGGTAT TCTCTTAGGAGAAACTTTAACTGCTGGTAGTGTGATTTTACTAGAAGGTGATTTAGGTGCTGGTAAAACTACTTTGGTAC AGGGCTTGGGTAAAGGTTTAAGTATTACTGAACCCATTGTCAGTCCTACTTTTACTCTGATTAATGAGTACACAGAAGGA CGTATACCCCTTTACCATCTGGATTTATACCGCTTAGAGCCACAAGAAGTATTAAGTTTAAATTTAGAAATTTATTGGGA AGGGATTGAGATAATTCCGGGTATTGTAGCGATTGAGTGGTCGGAACGAATGCCCTACAAGCCAAGTACCTACATTAACG TACTTTTGACTTATGGCGATGAGGGCAGTCGTCAAGCCGAAATTACACCATTCAATTGCACCATCAGCGATTTAATTGCT ACCAAGTGA
Upstream 100 bases:
>100_bases TCGAATAGCGTATTTAAAACCACATTTTCCATATATGACAGGAGGAAGGAGTTAGAGCGCAGTAGGGAAAAGAAAATTAT TTGCAACTAACAACTGACTA
Downstream 100 bases:
>100_bases ATGACTTTATTTCCGAATTGGGTAAAAACGCTGCTTAGTACTGTAGTAATATTAGGACTATTTGCCACTGAGTAGAAACA GTAAAAAAGTTACCCCAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MTIDQMTIDQMTKIFLADKESTLNLGILLGETLTAGSVILLEGDLGAGKTTLVQGLGKGLSITEPIVSPTFTLINEYTEG RIPLYHLDLYRLEPQEVLSLNLEIYWEGIEIIPGIVAIEWSERMPYKPSTYINVLLTYGDEGSRQAEITPFNCTISDLIA TK
Sequences:
>Translated_162_residues MTIDQMTIDQMTKIFLADKESTLNLGILLGETLTAGSVILLEGDLGAGKTTLVQGLGKGLSITEPIVSPTFTLINEYTEG RIPLYHLDLYRLEPQEVLSLNLEIYWEGIEIIPGIVAIEWSERMPYKPSTYINVLLTYGDEGSRQAEITPFNCTISDLIA TK >Mature_161_residues TIDQMTIDQMTKIFLADKESTLNLGILLGETLTAGSVILLEGDLGAGKTTLVQGLGKGLSITEPIVSPTFTLINEYTEGR IPLYHLDLYRLEPQEVLSLNLEIYWEGIEIIPGIVAIEWSERMPYKPSTYINVLLTYGDEGSRQAEITPFNCTISDLIAT K
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family
Homologues:
Organism=Escherichia coli, GI1790610, Length=138, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2300_NOSS1 (O52749)
Other databases:
- EMBL: AF046871 - EMBL: BA000019 - PIR: AE2093 - RefSeq: NP_486340.1 - ProteinModelPortal: O52749 - SMR: O52749 - STRING: O52749 - GeneID: 1105897 - GenomeReviews: BA000019_GR - KEGG: ana:alr2300 - NMPDR: fig|103690.1.peg.2607 - eggNOG: COG0802 - HOGENOM: HBG734187 - OMA: IVAIEWS - PhylomeDB: O52749 - ProtClustDB: CLSK895720 - BioCyc: NSP103690:ALR2300-MONOMER - InterPro: IPR003442 - TIGRFAMs: TIGR00150
Pfam domain/function: PF02367 UPF0079
EC number: NA
Molecular weight: Translated: 17939; Mature: 17808
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIDQMTIDQMTKIFLADKESTLNLGILLGETLTAGSVILLEGDLGAGKTTLVQGLGKGL CCCCHHHHHHHHEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHCCCCC SITEPIVSPTFTLINEYTEGRIPLYHLDLYRLEPQEVLSLNLEIYWEGIEIIPGIVAIEW CCCCCCCCCHHHHHHHCCCCCCEEEEEEEEEECHHHHHEEEEEEEECCEEECCEEEEEEE SERMPYKPSTYINVLLTYGDEGSRQAEITPFNCTISDLIATK CCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCHHHHCCCC >Mature Secondary Structure TIDQMTIDQMTKIFLADKESTLNLGILLGETLTAGSVILLEGDLGAGKTTLVQGLGKGL CCCHHHHHHHHEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHCCCCC SITEPIVSPTFTLINEYTEGRIPLYHLDLYRLEPQEVLSLNLEIYWEGIEIIPGIVAIEW CCCCCCCCCHHHHHHHCCCCCCEEEEEEEEEECHHHHHEEEEEEEECCEEECCEEEEEEE SERMPYKPSTYINVLLTYGDEGSRQAEITPFNCTISDLIATK CCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9794762; 11759840