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The map label for this gene is ybhK [C]

Identifier: 17229790

GI number: 17229790

Start: 2768333

End: 2769703

Strand: Direct

Name: ybhK [C]

Synonym: alr2298

Alternate gene names: 17229790

Gene position: 2768333-2769703 (Clockwise)

Preceding gene: 17229788

Following gene: 17229792

Centisome position: 43.16

GC content: 46.39

Gene sequence:

>1371_bases
ATGTCAATCGGTTTTCTCAGACAAGCCCTCAACGCATTGCAACAGCAGTCGCGCAGTCGAACTTCCCATCGGGTGAACCA
GTGGTTCAAATGGTTGTCCCCTGGATTATCGATAAAACGTTGGTTGCTAATCAGTGTTGGGGGTGTCCTGCTAGCGATTC
TAGGGTTAGCTATTTGGGTGAAGCTGACTCCCATTTTTTGGCTGTTGGAGTTAGTCAGGGGTTTCTTGGGAGCTGTCGCT
AACATTTTACCCAACTATATCAGTGGCCCTTTGGTGATTTTAGGTGGTTTGTTATTGTTGCTTTGGGGACAAACGCGCAC
TGTCGGCTCGATTACTCAGGTTTTAAGACCAGGTGCGGAAGAAGAACTTATTGATGTACTGTTAGCCCATCGACGCTTGT
ACAGAGGGCCGAAAATAGTAGTCATTGGCGGTGGTACGGGACTATCTACTTTGCTGAGAGGGTTAAAAACCTATAGTGCT
AATATTACGGCTATTGTCACAGTCGCTGATGATGGTGGCTCTTCTGGGCGGTTACGTCAAGAATTCGGTGTTTTACCACC
GGGAGATATTCGTAACTGTTTAGCAGCCTTAGCAGATGAAGAAAAGTTATTAACTGAGTTATTTCAATATCGTTTTCGGG
CTGGAGATGGCTTGACTGGTCACAGTTTTGGCAATTTGTTCTTAACCGCGATGAGTGATATCACTGGTGACTTGGAACGG
GCGGTGGCTGCTAGTTCTAAAGTCTTAGCTGTGAGAGGACAAGTTTTGCCTGCTACTCTCAGCGATGTTCGCCTTTGGGC
AGAATTAGCCGATGGTCGCCGCATTGAGGGCGAGTCTAGCATTCCCAAGGCTGGCGGTAAAATTGTCAAGATTGGTTGCA
TTCCGGCTAATCCTCCGGCTTTGCCAGCTGCTATTAAGGCCATCAAAGAAGCCGACTATATTATTATTGGCCCCGGTAGC
CTCTATACCAGTTTAATTCCTAACTTATTAGTATCAGATATTGCTGATGCGATCGCTCAATCCCAAGCCCCCCGGATTTA
TGTCTGCAATGTGATGACCCAACCAGGGGAAACTCAAGGATATACTGTTGCTGACCACATTCGCGCCATTGATGCAGCTT
GTGGAGAAAGACAGCTGTTTGATGCTGTTCTGGTACATAAAAAATCCCCCTCAGCCCAGTCACTCATCCGTTATGCTCAA
CAAGATTCCCATCCTGTTTTCTTAGACAGAGAAGCTGTATCTCAACTAGGGAGAAGAATTGTTTTAGCTAACGTTTTGTA
CGAGGATAAGACAGGATTCGTGCGTCACAATCCCCAAAAGTTAGCTAAAGTCCTATTGAAGTGGTATGGTGGAGCGCATC
ATGGAAAGTGA

Upstream 100 bases:

>100_bases
TGGAACTAAAAAAAGGTTTCATAATTTCATACTTGGTGTTAAAACCATTTAGTGTGCATTTTCTGTTAGTTATTCTTTGT
ACCACGGCTCCGAATCAGGT

Downstream 100 bases:

>100_bases
AGAGAATCACTAACTGTAGGAGATGGTGTAACTGCCCAGGGTAGATGATTGCACTGATGTACTTTGTCTAGAATCTAAAT
AATAGTGTGTTTCCGGCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 456; Mature: 455

Protein sequence:

>456_residues
MSIGFLRQALNALQQQSRSRTSHRVNQWFKWLSPGLSIKRWLLISVGGVLLAILGLAIWVKLTPIFWLLELVRGFLGAVA
NILPNYISGPLVILGGLLLLLWGQTRTVGSITQVLRPGAEEELIDVLLAHRRLYRGPKIVVIGGGTGLSTLLRGLKTYSA
NITAIVTVADDGGSSGRLRQEFGVLPPGDIRNCLAALADEEKLLTELFQYRFRAGDGLTGHSFGNLFLTAMSDITGDLER
AVAASSKVLAVRGQVLPATLSDVRLWAELADGRRIEGESSIPKAGGKIVKIGCIPANPPALPAAIKAIKEADYIIIGPGS
LYTSLIPNLLVSDIADAIAQSQAPRIYVCNVMTQPGETQGYTVADHIRAIDAACGERQLFDAVLVHKKSPSAQSLIRYAQ
QDSHPVFLDREAVSQLGRRIVLANVLYEDKTGFVRHNPQKLAKVLLKWYGGAHHGK

Sequences:

>Translated_456_residues
MSIGFLRQALNALQQQSRSRTSHRVNQWFKWLSPGLSIKRWLLISVGGVLLAILGLAIWVKLTPIFWLLELVRGFLGAVA
NILPNYISGPLVILGGLLLLLWGQTRTVGSITQVLRPGAEEELIDVLLAHRRLYRGPKIVVIGGGTGLSTLLRGLKTYSA
NITAIVTVADDGGSSGRLRQEFGVLPPGDIRNCLAALADEEKLLTELFQYRFRAGDGLTGHSFGNLFLTAMSDITGDLER
AVAASSKVLAVRGQVLPATLSDVRLWAELADGRRIEGESSIPKAGGKIVKIGCIPANPPALPAAIKAIKEADYIIIGPGS
LYTSLIPNLLVSDIADAIAQSQAPRIYVCNVMTQPGETQGYTVADHIRAIDAACGERQLFDAVLVHKKSPSAQSLIRYAQ
QDSHPVFLDREAVSQLGRRIVLANVLYEDKTGFVRHNPQKLAKVLLKWYGGAHHGK
>Mature_455_residues
SIGFLRQALNALQQQSRSRTSHRVNQWFKWLSPGLSIKRWLLISVGGVLLAILGLAIWVKLTPIFWLLELVRGFLGAVAN
ILPNYISGPLVILGGLLLLLWGQTRTVGSITQVLRPGAEEELIDVLLAHRRLYRGPKIVVIGGGTGLSTLLRGLKTYSAN
ITAIVTVADDGGSSGRLRQEFGVLPPGDIRNCLAALADEEKLLTELFQYRFRAGDGLTGHSFGNLFLTAMSDITGDLERA
VAASSKVLAVRGQVLPATLSDVRLWAELADGRRIEGESSIPKAGGKIVKIGCIPANPPALPAAIKAIKEADYIIIGPGSL
YTSLIPNLLVSDIADAIAQSQAPRIYVCNVMTQPGETQGYTVADHIRAIDAACGERQLFDAVLVHKKSPSAQSLIRYAQQ
DSHPVFLDREAVSQLGRRIVLANVLYEDKTGFVRHNPQKLAKVLLKWYGGAHHGK

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family

Homologues:

Organism=Escherichia coli, GI1786997, Length=224, Percent_Identity=37.9464285714286, Blast_Score=139, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2298_NOSS1 (O52750)

Other databases:

- EMBL:   AF046871
- EMBL:   BA000019
- PIR:   AC2093
- RefSeq:   NP_486338.1
- ProteinModelPortal:   O52750
- SMR:   O52750
- STRING:   O52750
- GeneID:   1105895
- GenomeReviews:   BA000019_GR
- KEGG:   ana:alr2298
- NMPDR:   fig|103690.1.peg.2605
- eggNOG:   COG0391
- HOGENOM:   HBG321904
- OMA:   DIRNCLA
- PhylomeDB:   O52750
- ProtClustDB:   CLSK893381
- BioCyc:   NSP103690:ALR2298-MONOMER
- InterPro:   IPR002882
- InterPro:   IPR010119
- TIGRFAMs:   TIGR01826

Pfam domain/function: PF01933 UPF0052

EC number: NA

Molecular weight: Translated: 49371; Mature: 49240

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIGFLRQALNALQQQSRSRTSHRVNQWFKWLSPGLSIKRWLLISVGGVLLAILGLAIWV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KLTPIFWLLELVRGFLGAVANILPNYISGPLVILGGLLLLLWGQTRTVGSITQVLRPGAE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCH
EELIDVLLAHRRLYRGPKIVVIGGGTGLSTLLRGLKTYSANITAIVTVADDGGSSGRLRQ
HHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHH
EFGVLPPGDIRNCLAALADEEKLLTELFQYRFRAGDGLTGHSFGNLFLTAMSDITGDLER
HCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
AVAASSKVLAVRGQVLPATLSDVRLWAELADGRRIEGESSIPKAGGKIVKIGCIPANPPA
HHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
LPAAIKAIKEADYIIIGPGSLYTSLIPNLLVSDIADAIAQSQAPRIYVCNVMTQPGETQG
HHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCC
YTVADHIRAIDAACGERQLFDAVLVHKKSPSAQSLIRYAQQDSHPVFLDREAVSQLGRRI
CCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEECHHHHHHHHHHH
VLANVLYEDKTGFVRHNPQKLAKVLLKWYGGAHHGK
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SIGFLRQALNALQQQSRSRTSHRVNQWFKWLSPGLSIKRWLLISVGGVLLAILGLAIWV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KLTPIFWLLELVRGFLGAVANILPNYISGPLVILGGLLLLLWGQTRTVGSITQVLRPGAE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCH
EELIDVLLAHRRLYRGPKIVVIGGGTGLSTLLRGLKTYSANITAIVTVADDGGSSGRLRQ
HHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHH
EFGVLPPGDIRNCLAALADEEKLLTELFQYRFRAGDGLTGHSFGNLFLTAMSDITGDLER
HCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
AVAASSKVLAVRGQVLPATLSDVRLWAELADGRRIEGESSIPKAGGKIVKIGCIPANPPA
HHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
LPAAIKAIKEADYIIIGPGSLYTSLIPNLLVSDIADAIAQSQAPRIYVCNVMTQPGETQG
HHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCC
YTVADHIRAIDAACGERQLFDAVLVHKKSPSAQSLIRYAQQDSHPVFLDREAVSQLGRRI
CCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEECHHHHHHHHHHH
VLANVLYEDKTGFVRHNPQKLAKVLLKWYGGAHHGK
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9794762; 11759840