Click here to switch to the map view.

The map label for this gene is sqdX [H]

Identifier: 17229757

GI number: 17229757

Start: 2725143

End: 2726279

Strand: Direct

Name: sqdX [H]

Synonym: alr2265

Alternate gene names: 17229757

Gene position: 2725143-2726279 (Clockwise)

Preceding gene: 17229756

Following gene: 17229758

Centisome position: 42.49

GC content: 45.12

Gene sequence:

>1137_bases
ATGAGAATTGCCTTATTCACCGAAACCTTTTTGCCTAAGGTTGACGGTATTGTGACACGCCTGCGCCACACCGTTGATCA
TTTACAACGTCTGGGAAACGAAGTTTTAGTGATTGCCCCTGATGGGGGCATTACTGAACACAAAGGAGCGAAAGTTTACG
GCGTTAGCGGCTTTCCCTTGCCTCTGTATCCAGAGTTAAAAATGGCACTTCCTCGCCCAGCTATTGGTTACGCCCTAGAA
GAGTTTCAACCAGATATTATTCATGTTGTGAATCCGGCAGTCTTAGGTTTGTCAGGAATTTTTTACAGTAAAGTCCAAAA
AATCCCCTTAGTAGCTTCTTATCATACTCATCTACCCCAATATCTCCAACATTATGGTTTAGGAATGCTAGAAGGGTTGC
TGTGGGAACTGCTAAAAGGAGCGCACAATCAAGCTGTCTTAAATCTTTGTACTTCCACCGCGATGGTGGCAGAACTATCA
GGACACGGTATCGAACGAGTGGATTTATGGCAAAGAGGAGTAGACACAGAATTATTTCATCCTGAATTAGCCAGTTTAGA
GATGCGATCGCATCTGTCACAAAACCACCCAGAAAACCCCCTATTATTATATGTAGGTCGTCTTTCTGCTGAAAAAGAAA
TTGAGCGCATCAAACCCATCCTAGAAGCAATTCCCCAAGCGAGATTAGCCCTGGTGGGAGACGGCCCCCACCGCCAAGCA
TTAGAAAAACATTTCTTTGGTACAAATACTCATTTTGTCGGCTATCTCACAGGACGTGAATTAGGTTCTGCTTTTGCCAG
CGCCGATGCCTTTATTTTTCCCTCTCGCACAGAAACTCTGGGTTTAGTCTTACTAGAAGCAATGGCAGCCGGCTGTCCAG
TAGTCGCCGCCCGTTCCGGTGGTATCCCTGATATCGTCACAGATGGGGTCAATGGTTATCTTTTTAACCCAAAAGCCGAT
ATTCAAGATGCCATTAATGCAACCGTCCGCCTCTTAGAAAACGCCCAAGAACGTGATACCATCCGTCAAAATGCTCGTCG
AGAAGCCGAAGGGTGGGGATGGGCATCTGCTACACGTCAGCTACAAGATTATTACCAAAAAGTGTTAATTAAAGAAAAGT
TAGCAAAAGTAGGTTGA

Upstream 100 bases:

>100_bases
CTGTACACAATTGATTAGATTACGGGAGACAGTTTACTCTGTTGTAGATATCGAAATTCAACAGAAGTTGGGACTATCTC
CCCTTACTGCATAGTTTTGT

Downstream 100 bases:

>100_bases
AGAAGGCAGTCCTGATGAAAAAATTTCACAGTCATAGATGAAAGATATATTTCCCCTACAACCTCTTTTCAGGCAGGGGA
AAAGAAAACTATTAGCAACG

Product: sulfolipid sulfoquinovosyldiacylglycerol biosynthesis protein

Products: NA

Alternate protein names: Guanosine diphosphomannose-dependent alpha-mannosyltransferase [H]

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MRIALFTETFLPKVDGIVTRLRHTVDHLQRLGNEVLVIAPDGGITEHKGAKVYGVSGFPLPLYPELKMALPRPAIGYALE
EFQPDIIHVVNPAVLGLSGIFYSKVQKIPLVASYHTHLPQYLQHYGLGMLEGLLWELLKGAHNQAVLNLCTSTAMVAELS
GHGIERVDLWQRGVDTELFHPELASLEMRSHLSQNHPENPLLLYVGRLSAEKEIERIKPILEAIPQARLALVGDGPHRQA
LEKHFFGTNTHFVGYLTGRELGSAFASADAFIFPSRTETLGLVLLEAMAAGCPVVAARSGGIPDIVTDGVNGYLFNPKAD
IQDAINATVRLLENAQERDTIRQNARREAEGWGWASATRQLQDYYQKVLIKEKLAKVG

Sequences:

>Translated_378_residues
MRIALFTETFLPKVDGIVTRLRHTVDHLQRLGNEVLVIAPDGGITEHKGAKVYGVSGFPLPLYPELKMALPRPAIGYALE
EFQPDIIHVVNPAVLGLSGIFYSKVQKIPLVASYHTHLPQYLQHYGLGMLEGLLWELLKGAHNQAVLNLCTSTAMVAELS
GHGIERVDLWQRGVDTELFHPELASLEMRSHLSQNHPENPLLLYVGRLSAEKEIERIKPILEAIPQARLALVGDGPHRQA
LEKHFFGTNTHFVGYLTGRELGSAFASADAFIFPSRTETLGLVLLEAMAAGCPVVAARSGGIPDIVTDGVNGYLFNPKAD
IQDAINATVRLLENAQERDTIRQNARREAEGWGWASATRQLQDYYQKVLIKEKLAKVG
>Mature_378_residues
MRIALFTETFLPKVDGIVTRLRHTVDHLQRLGNEVLVIAPDGGITEHKGAKVYGVSGFPLPLYPELKMALPRPAIGYALE
EFQPDIIHVVNPAVLGLSGIFYSKVQKIPLVASYHTHLPQYLQHYGLGMLEGLLWELLKGAHNQAVLNLCTSTAMVAELS
GHGIERVDLWQRGVDTELFHPELASLEMRSHLSQNHPENPLLLYVGRLSAEKEIERIKPILEAIPQARLALVGDGPHRQA
LEKHFFGTNTHFVGYLTGRELGSAFASADAFIFPSRTETLGLVLLEAMAAGCPVVAARSGGIPDIVTDGVNGYLFNPKAD
IQDAINATVRLLENAQERDTIRQNARREAEGWGWASATRQLQDYYQKVLIKEKLAKVG

Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to GlcAGroAc2 to generate 1,2-di-O-C16/C18:1-(alpha-D- mannopyranosyl)-(1-4)-(alpha-D-glucopyranosyluronic acid)-(1-3)- glycerol(ManGlcAGroAc2) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 41723; Mature: 41723

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIALFTETFLPKVDGIVTRLRHTVDHLQRLGNEVLVIAPDGGITEHKGAKVYGVSGFPL
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEECCCCCC
PLYPELKMALPRPAIGYALEEFQPDIIHVVNPAVLGLSGIFYSKVQKIPLVASYHTHLPQ
CCCCHHHHCCCCCHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
YLQHYGLGMLEGLLWELLKGAHNQAVLNLCTSTAMVAELSGHGIERVDLWQRGVDTELFH
HHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCC
PELASLEMRSHLSQNHPENPLLLYVGRLSAEKEIERIKPILEAIPQARLALVGDGPHRQA
CHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCHHHEEEECCCHHHHH
LEKHFFGTNTHFVGYLTGRELGSAFASADAFIFPSRTETLGLVLLEAMAAGCPVVAARSG
HHHHHCCCCCEEEEEECHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCCCEEEECCC
GIPDIVTDGVNGYLFNPKADIQDAINATVRLLENAQERDTIRQNARREAEGWGWASATRQ
CCCHHHHCCCCCEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHH
LQDYYQKVLIKEKLAKVG
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRIALFTETFLPKVDGIVTRLRHTVDHLQRLGNEVLVIAPDGGITEHKGAKVYGVSGFPL
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEECCCCCC
PLYPELKMALPRPAIGYALEEFQPDIIHVVNPAVLGLSGIFYSKVQKIPLVASYHTHLPQ
CCCCHHHHCCCCCHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
YLQHYGLGMLEGLLWELLKGAHNQAVLNLCTSTAMVAELSGHGIERVDLWQRGVDTELFH
HHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCC
PELASLEMRSHLSQNHPENPLLLYVGRLSAEKEIERIKPILEAIPQARLALVGDGPHRQA
CHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCHHHEEEECCCHHHHH
LEKHFFGTNTHFVGYLTGRELGSAFASADAFIFPSRTETLGLVLLEAMAAGCPVVAARSG
HHHHHCCCCCEEEEEECHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCCCEEEECCC
GIPDIVTDGVNGYLFNPKADIQDAINATVRLLENAQERDTIRQNARREAEGWGWASATRQ
CCCHHHHCCCCCEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHH
LQDYYQKVLIKEKLAKVG
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]