| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229756
Identifier: 17229756
GI number: 17229756
Start: 2723405
End: 2725036
Strand: Direct
Name: 17229756
Synonym: alr2264
Alternate gene names: NA
Gene position: 2723405-2725036 (Clockwise)
Preceding gene: 17229753
Following gene: 17229757
Centisome position: 42.46
GC content: 42.16
Gene sequence:
>1632_bases ATGTTATTCAGCATATTGTGGATTTTAATCATGGGCTTTTTTGCAGGTCAAATTGCCCGTCGCTTAACAGCACCGCCGTT AATTGGCATGATTCTAGTCGGGATTTTTGTAGGCCCCCAAGTTGGTAATGTCATCAGTCAAGATGTGCTTGGCGCTGCTG ATGAATTAAGAACGGTGGCGGTGACAATTATCCTGATGAAAGCTGGGCTGGGATTGGACAGGGAAAAACTGGCCGAACAG GGAAGTGTGGCATTGCGCTTGGGATTTCTACCTGCAACAACCGAAGCGATCGCCATTGCTATTGCTTCTATAATTATCTT TAAATTTGATTTTCCTACTGGCTTACTTTTAGGTTGTGTCATTGGTGCTGAGTCGCCGGCGGTAATTGTGCCAGGAATGT TGAGGCTGAAAAGTTTAGGCTTGGGAGTTACAAAAGGGATTCCCGATGCCATTTTGACAGGTAGTGCCTTATCTGATGTC TTGCTATTACTTGTCTTTAGTCTATTGTTGAATTTCTTAGGTGATGGTGGTGTTGAGCAAATCACCCTTATAGGAGTATT TACATTAAATACACTGTATTTACTCCCCATACAAATACTCATGCAAATCGTCTTGGGGTTGTTATTGGGGTATTTAGCTG CGCGTTTAATAGTTTTGCTGTTAACAAAACAAAACTGGACACAAAATGTCGTTCAAGACACCGTAATTTCCGCAAGTTTA GCTTTATTTTTAGTAATTATTGCTAATGCTCTACCTTACTTCTCCGGCTATTTAGCAACAATAGCAATGGGATTTTTCTT AATTGAATTAGATGCTCCCTTAGCGAGAAGATTGCGCGGCGGATTCGATGGTTTATGGGTAGTAGCGGAGATTTTTTTGT TTGTCTTGTTAGGGGCAACAATTCAACTACAAGTTTTAGAAAACATCTTGCTACCAGGAATTTTAATTCTGGCCATTGGT TTATTTATTGGTCGAATGATTGGTTGGTATCTTTCAACTTTGGGTAGTAATTGGAACTGGCACGAAAGACTGTTTCTGCT ACCAGGAAACTCAGCTAAAGCCACAGTGCAAGCTGCCATTGGGGCAATTCCCCTAGCCCAAGGTATTGCGGGAGGTGAGA TAATTTTAGCGATCGCTGTGCTTTCAATTCTCATTACTGCACCCTTGGGCGCTTGGGCAACAACTGTCTTTGCACCTAAA TTGTTAACGAGAGGAGAAGTTGACCCTACAAAAGTGACAATAGCTACACGTACTTTATTGCTAGCAGCAGTAGATACATC CAGTTTAGCCACAGAGGTTTTAACCAAAGTTGCAGATTTAGCACGACGCAGTAACGGTGAGGCGATCGTTTTACACGTAG TTAATACCTCGCATCGGCAAGATGTTGAACAAGTGCAAGCACAAGCAAAACAGCTATTATCAGATATTAGATATCAATTT CTCACTGTTACTGGTGCTGTTCCCGAAGAAATTCTTCGCATTGCCGAGACATATAATGCAACGGCAATTGTGATGGGAAA ACGGGGACATCAACCTTGGGAGAAAGTACTGATTGGCTCAGTATCCCAAGCTGTCTTAGAAAATAGTTCCATACCCGTCA TCTTGCTGGACACCCGGCCAGAAAAAAATTAA
Upstream 100 bases:
>100_bases TTTCTTGCTTGCTGCGGGAGGGTAGGAGTTTGTTGTATACATCACCTGGCTTCCTTGTAGTAAGTCTTGATCTACAAATC GCAACACTGGCAGTCAAGGT
Downstream 100 bases:
>100_bases ATCTGGCTGTACACAATTGATTAGATTACGGGAGACAGTTTACTCTGTTGTAGATATCGAAATTCAACAGAAGTTGGGAC TATCTCCCCTTACTGCATAG
Product: Na+/H+-exchanging protein
Products: NA
Alternate protein names: MjNhaP1 [H]
Number of amino acids: Translated: 543; Mature: 543
Protein sequence:
>543_residues MLFSILWILIMGFFAGQIARRLTAPPLIGMILVGIFVGPQVGNVISQDVLGAADELRTVAVTIILMKAGLGLDREKLAEQ GSVALRLGFLPATTEAIAIAIASIIIFKFDFPTGLLLGCVIGAESPAVIVPGMLRLKSLGLGVTKGIPDAILTGSALSDV LLLLVFSLLLNFLGDGGVEQITLIGVFTLNTLYLLPIQILMQIVLGLLLGYLAARLIVLLLTKQNWTQNVVQDTVISASL ALFLVIIANALPYFSGYLATIAMGFFLIELDAPLARRLRGGFDGLWVVAEIFLFVLLGATIQLQVLENILLPGILILAIG LFIGRMIGWYLSTLGSNWNWHERLFLLPGNSAKATVQAAIGAIPLAQGIAGGEIILAIAVLSILITAPLGAWATTVFAPK LLTRGEVDPTKVTIATRTLLLAAVDTSSLATEVLTKVADLARRSNGEAIVLHVVNTSHRQDVEQVQAQAKQLLSDIRYQF LTVTGAVPEEILRIAETYNATAIVMGKRGHQPWEKVLIGSVSQAVLENSSIPVILLDTRPEKN
Sequences:
>Translated_543_residues MLFSILWILIMGFFAGQIARRLTAPPLIGMILVGIFVGPQVGNVISQDVLGAADELRTVAVTIILMKAGLGLDREKLAEQ GSVALRLGFLPATTEAIAIAIASIIIFKFDFPTGLLLGCVIGAESPAVIVPGMLRLKSLGLGVTKGIPDAILTGSALSDV LLLLVFSLLLNFLGDGGVEQITLIGVFTLNTLYLLPIQILMQIVLGLLLGYLAARLIVLLLTKQNWTQNVVQDTVISASL ALFLVIIANALPYFSGYLATIAMGFFLIELDAPLARRLRGGFDGLWVVAEIFLFVLLGATIQLQVLENILLPGILILAIG LFIGRMIGWYLSTLGSNWNWHERLFLLPGNSAKATVQAAIGAIPLAQGIAGGEIILAIAVLSILITAPLGAWATTVFAPK LLTRGEVDPTKVTIATRTLLLAAVDTSSLATEVLTKVADLARRSNGEAIVLHVVNTSHRQDVEQVQAQAKQLLSDIRYQF LTVTGAVPEEILRIAETYNATAIVMGKRGHQPWEKVLIGSVSQAVLENSSIPVILLDTRPEKN >Mature_543_residues MLFSILWILIMGFFAGQIARRLTAPPLIGMILVGIFVGPQVGNVISQDVLGAADELRTVAVTIILMKAGLGLDREKLAEQ GSVALRLGFLPATTEAIAIAIASIIIFKFDFPTGLLLGCVIGAESPAVIVPGMLRLKSLGLGVTKGIPDAILTGSALSDV LLLLVFSLLLNFLGDGGVEQITLIGVFTLNTLYLLPIQILMQIVLGLLLGYLAARLIVLLLTKQNWTQNVVQDTVISASL ALFLVIIANALPYFSGYLATIAMGFFLIELDAPLARRLRGGFDGLWVVAEIFLFVLLGATIQLQVLENILLPGILILAIG LFIGRMIGWYLSTLGSNWNWHERLFLLPGNSAKATVQAAIGAIPLAQGIAGGEIILAIAVLSILITAPLGAWATTVFAPK LLTRGEVDPTKVTIATRTLLLAAVDTSSLATEVLTKVADLARRSNGEAIVLHVVNTSHRQDVEQVQAQAKQLLSDIRYQF LTVTGAVPEEILRIAETYNATAIVMGKRGHQPWEKVLIGSVSQAVLENSSIPVILLDTRPEKN
Specific function: This is a Na(+)/H(+) antiporter. Can also transport lithium [H]
COG id: COG0025
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family [H]
Homologues:
Organism=Homo sapiens, GI66793392, Length=373, Percent_Identity=31.0991957104558, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI47271479, Length=364, Percent_Identity=29.6703296703297, Blast_Score=114, Evalue=3e-25, Organism=Homo sapiens, GI154937338, Length=304, Percent_Identity=30.5921052631579, Blast_Score=103, Evalue=5e-22, Organism=Caenorhabditis elegans, GI25152227, Length=437, Percent_Identity=25.858123569794, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17567635, Length=406, Percent_Identity=26.8472906403941, Blast_Score=92, Evalue=5e-19, Organism=Caenorhabditis elegans, GI32566724, Length=175, Percent_Identity=32, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI20129297, Length=427, Percent_Identity=29.5081967213115, Blast_Score=119, Evalue=4e-27, Organism=Drosophila melanogaster, GI45550940, Length=427, Percent_Identity=29.5081967213115, Blast_Score=119, Evalue=5e-27, Organism=Drosophila melanogaster, GI24649169, Length=378, Percent_Identity=28.8359788359788, Blast_Score=95, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 58029; Mature: 58029
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFSILWILIMGFFAGQIARRLTAPPLIGMILVGIFVGPQVGNVISQDVLGAADELRTVA CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHH VTIILMKAGLGLDREKLAEQGSVALRLGFLPATTEAIAIAIASIIIFKFDFPTGLLLGCV HHHHHHHHCCCCCHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHEECCCHHHHHHHH IGAESPAVIVPGMLRLKSLGLGVTKGIPDAILTGSALSDVLLLLVFSLLLNFLGDGGVEQ HCCCCCCEECCHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCE ITLIGVFTLNTLYLLPIQILMQIVLGLLLGYLAARLIVLLLTKQNWTQNVVQDTVISASL EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ALFLVIIANALPYFSGYLATIAMGFFLIELDAPLARRLRGGFDGLWVVAEIFLFVLLGAT HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHCCCCCHHHHHHHHHHHHHHCCH IQLQVLENILLPGILILAIGLFIGRMIGWYLSTLGSNWNWHERLFLLPGNSAKATVQAAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHH GAIPLAQGIAGGEIILAIAVLSILITAPLGAWATTVFAPKLLTRGEVDPTKVTIATRTLL HHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHH LAAVDTSSLATEVLTKVADLARRSNGEAIVLHVVNTSHRQDVEQVQAQAKQLLSDIRYQF HHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH LTVTGAVPEEILRIAETYNATAIVMGKRGHQPWEKVLIGSVSQAVLENSSIPVILLDTRP HEECCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCC EKN CCC >Mature Secondary Structure MLFSILWILIMGFFAGQIARRLTAPPLIGMILVGIFVGPQVGNVISQDVLGAADELRTVA CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHH VTIILMKAGLGLDREKLAEQGSVALRLGFLPATTEAIAIAIASIIIFKFDFPTGLLLGCV HHHHHHHHCCCCCHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHEECCCHHHHHHHH IGAESPAVIVPGMLRLKSLGLGVTKGIPDAILTGSALSDVLLLLVFSLLLNFLGDGGVEQ HCCCCCCEECCHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCE ITLIGVFTLNTLYLLPIQILMQIVLGLLLGYLAARLIVLLLTKQNWTQNVVQDTVISASL EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ALFLVIIANALPYFSGYLATIAMGFFLIELDAPLARRLRGGFDGLWVVAEIFLFVLLGAT HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHCCCCCHHHHHHHHHHHHHHCCH IQLQVLENILLPGILILAIGLFIGRMIGWYLSTLGSNWNWHERLFLLPGNSAKATVQAAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHH GAIPLAQGIAGGEIILAIAVLSILITAPLGAWATTVFAPKLLTRGEVDPTKVTIATRTLL HHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHH LAAVDTSSLATEVLTKVADLARRSNGEAIVLHVVNTSHRQDVEQVQAQAKQLLSDIRYQF HHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH LTVTGAVPEEILRIAETYNATAIVMGKRGHQPWEKVLIGSVSQAVLENSSIPVILLDTRP HEECCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCC EKN CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]