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The map label for this gene is gvpJ

Identifier: 17229742

GI number: 17229742

Start: 2703434

End: 2703880

Strand: Reverse

Name: gvpJ

Synonym: all2250

Alternate gene names: 17229742

Gene position: 2703880-2703434 (Counterclockwise)

Preceding gene: 17229743

Following gene: 17229741

Centisome position: 42.16

GC content: 40.49

Gene sequence:

>447_bases
GTGACTACTACCCCCATACACCCAACACGTCCTCAGACTAACTCAAATCGAGTAATTCCCACTTCTACACAAGGTTCTAC
CTTAGCGGATATTCTCGAAAGAGTTTTGGATAAAGGTATTGTGATTGCTGGTGATATTTCTATATCTATTGCCTCAACTG
AACTCATACATATTAGGATTCGCCTGTTAATTTCTTCAGTTGATAAAGCCCGTGAGATGGGTATCAATTGGTGGGAAAAT
GACCCCTATCTCAGTAGCAAATCGCAACGCTTAGTTGAAGAAAACCAACAACTGCAACAACGGCTAGAAAGTCTAGAAAC
ACAACTACGTTTACTCACGTCTGCGGCGAAAGAAGAAACGACATTAACAGCTAACAATCCAGAAGATTTACAACCAATGT
ATGAAGTAAATAGTCAAGAAGGAGATAACTCCCAACTTGAGGCTTAG

Upstream 100 bases:

>100_bases
TCAGCCGGACTGTAGCCACCAATGCTCTCAACTCTTTAGAGCAGAAAGGCTTAGTAAGCAAGAACAATCATGTATATACC
ATTGAAGAGCCGAATCAATC

Downstream 100 bases:

>100_bases
TCAGATTCTGGAAATCCCCAAGTAACCCAGGTTAAATTTATAGCAATTTTCTGGATTTTGAATTGGGATTAGCCTGGATT
GAATCGAATTCAAGAAATTT

Product: gas vesicle protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MTTTPIHPTRPQTNSNRVIPTSTQGSTLADILERVLDKGIVIAGDISISIASTELIHIRIRLLISSVDKAREMGINWWEN
DPYLSSKSQRLVEENQQLQQRLESLETQLRLLTSAAKEETTLTANNPEDLQPMYEVNSQEGDNSQLEA

Sequences:

>Translated_148_residues
MTTTPIHPTRPQTNSNRVIPTSTQGSTLADILERVLDKGIVIAGDISISIASTELIHIRIRLLISSVDKAREMGINWWEN
DPYLSSKSQRLVEENQQLQQRLESLETQLRLLTSAAKEETTLTANNPEDLQPMYEVNSQEGDNSQLEA
>Mature_147_residues
TTTPIHPTRPQTNSNRVIPTSTQGSTLADILERVLDKGIVIAGDISISIASTELIHIRIRLLISSVDKAREMGINWWEND
PYLSSKSQRLVEENQQLQQRLESLETQLRLLTSAAKEETTLTANNPEDLQPMYEVNSQEGDNSQLEA

Specific function: Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. This protein could be important for the shape determ

COG id: NA

COG function: NA

Gene ontology:

Cell location: Vacuole, gas vesicle (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gas vesicle protein type A family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GVPJ_NOSS1 (Q8YUT1)

Other databases:

- EMBL:   BA000019
- PIR:   AC2087
- RefSeq:   NP_486290.1
- STRING:   Q8YUT1
- GeneID:   1105847
- GenomeReviews:   BA000019_GR
- KEGG:   ana:all2250
- NMPDR:   fig|103690.1.peg.2557
- eggNOG:   NOG08757
- HOGENOM:   HBG695314
- OMA:   ELIHIRI
- ProtClustDB:   CLSK356664
- BioCyc:   NSP103690:ALL2250-MONOMER
- GO:   GO:0005773
- InterPro:   IPR000638
- InterPro:   IPR018493

Pfam domain/function: PF00741 Gas_vesicle

EC number: NA

Molecular weight: Translated: 16598; Mature: 16467

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS00234 GAS_VESICLE_A_1; PS00669 GAS_VESICLE_A_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTPIHPTRPQTNSNRVIPTSTQGSTLADILERVLDKGIVIAGDISISIASTELIHIRI
CCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCEEEECCCEEEECCHHHHHHHH
RLLISSVDKAREMGINWWENDPYLSSKSQRLVEENQQLQQRLESLETQLRLLTSAAKEET
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TLTANNPEDLQPMYEVNSQEGDNSQLEA
EEECCCCHHCCHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TTTPIHPTRPQTNSNRVIPTSTQGSTLADILERVLDKGIVIAGDISISIASTELIHIRI
CCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCEEEECCCEEEECCHHHHHHHH
RLLISSVDKAREMGINWWENDPYLSSKSQRLVEENQQLQQRLESLETQLRLLTSAAKEET
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TLTANNPEDLQPMYEVNSQEGDNSQLEA
EEECCCCHHCCHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840