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The map label for this gene is gvpK

Identifier: 17229741

GI number: 17229741

Start: 2702841

End: 2703308

Strand: Reverse

Name: gvpK

Synonym: all2249

Alternate gene names: 17229741

Gene position: 2703308-2702841 (Counterclockwise)

Preceding gene: 17229742

Following gene: 17229740

Centisome position: 42.15

GC content: 39.53

Gene sequence:

>468_bases
ATGGTTTGTACTCCAGTTGAAAAGTCCCCTAATTTGCTACCTACCACTTCTAAAGCTAACAGCAAAGCAGGTTTAGCTCC
TTTACTTTTGACTGTAGTGGAACTAATACGCCAGCTGATGGAGGCACAAGTAATTCGGCGCATGGAACAGGACTGTCTTA
GCGAATCTGAGCTAGAACAAGCAAGTGAAAGTTTGCAAAAACTAGAAGAACAAGTTCTAAATCTGTGTCATATTTTTGAG
ATTGAACCCGCAGACTTAAATATAAATTTAGGTGATGTTGGTACTCTTTTACCTTCCCCAGGATCTTATTATCCGGGTGA
GATAGGAAATAAACCTTCTGTGCTGGAACTGCTAGACCGTCTATTAAACACAGGAATTGTTGTAGATGGTGAAATAGATT
TAGGTTTAGCTCAACTCAATCTCATTCACGCTAAATTGCGCTTAGTTTTAACCTCAAGACCGTTGTAA

Upstream 100 bases:

>100_bases
CCCAGGTTAAATTTATAGCAATTTTCTGGATTTTGAATTGGGATTAGCCTGGATTGAATCGAATTCAAGAAATTTAGAAA
AGGTAGATAGCATCATGACA

Downstream 100 bases:

>100_bases
TTATAAGTAAAAGAGAACAGAGGAAAGTCAGGTGGGTAATACCCACCTTAATCTACGCATCACGGGCAATTCTCACCCTA
ATTGAATTTTGAATTTTATG

Product: gas vesicle protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MVCTPVEKSPNLLPTTSKANSKAGLAPLLLTVVELIRQLMEAQVIRRMEQDCLSESELEQASESLQKLEEQVLNLCHIFE
IEPADLNINLGDVGTLLPSPGSYYPGEIGNKPSVLELLDRLLNTGIVVDGEIDLGLAQLNLIHAKLRLVLTSRPL

Sequences:

>Translated_155_residues
MVCTPVEKSPNLLPTTSKANSKAGLAPLLLTVVELIRQLMEAQVIRRMEQDCLSESELEQASESLQKLEEQVLNLCHIFE
IEPADLNINLGDVGTLLPSPGSYYPGEIGNKPSVLELLDRLLNTGIVVDGEIDLGLAQLNLIHAKLRLVLTSRPL
>Mature_155_residues
MVCTPVEKSPNLLPTTSKANSKAGLAPLLLTVVELIRQLMEAQVIRRMEQDCLSESELEQASESLQKLEEQVLNLCHIFE
IEPADLNINLGDVGTLLPSPGSYYPGEIGNKPSVLELLDRLLNTGIVVDGEIDLGLAQLNLIHAKLRLVLTSRPL

Specific function: May play a structural or regulatory role in gas vesicle synthesis

COG id: NA

COG function: NA

Gene ontology:

Cell location: Vacuole, gas vesicle (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GVPK_NOSS1 (Q8YUT2)

Other databases:

- EMBL:   BA000019
- PIR:   AB2087
- RefSeq:   NP_486289.1
- STRING:   Q8YUT2
- GeneID:   1105846
- GenomeReviews:   BA000019_GR
- KEGG:   ana:all2249
- NMPDR:   fig|103690.1.peg.2556
- eggNOG:   NOG149360
- HOGENOM:   HBG556144
- OMA:   PADLNIN
- ProtClustDB:   CLSK895698
- BioCyc:   NSP103690:ALL2249-MONOMER
- GO:   GO:0005773
- InterPro:   IPR000638
- InterPro:   IPR007805

Pfam domain/function: PF00741 Gas_vesicle; PF05121 GvpK

EC number: NA

Molecular weight: Translated: 16948; Mature: 16948

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVCTPVEKSPNLLPTTSKANSKAGLAPLLLTVVELIRQLMEAQVIRRMEQDCLSESELEQ
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
ASESLQKLEEQVLNLCHIFEIEPADLNINLGDVGTLLPSPGSYYPGEIGNKPSVLELLDR
HHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHCCCCCCCCCCCCCCCCCCHHHHHHH
LLNTGIVVDGEIDLGLAQLNLIHAKLRLVLTSRPL
HHHCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVCTPVEKSPNLLPTTSKANSKAGLAPLLLTVVELIRQLMEAQVIRRMEQDCLSESELEQ
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
ASESLQKLEEQVLNLCHIFEIEPADLNINLGDVGTLLPSPGSYYPGEIGNKPSVLELLDR
HHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHCCCCCCCCCCCCCCCCCCHHHHHHH
LLNTGIVVDGEIDLGLAQLNLIHAKLRLVLTSRPL
HHHCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840