Click here to switch to the map view.

The map label for this gene is gvpF [H]

Identifier: 17229740

GI number: 17229740

Start: 2702009

End: 2702743

Strand: Reverse

Name: gvpF [H]

Synonym: all2248

Alternate gene names: 17229740

Gene position: 2702743-2702009 (Counterclockwise)

Preceding gene: 17229741

Following gene: 17229739

Centisome position: 42.14

GC content: 36.46

Gene sequence:

>735_bases
ATGAGTTCTGGTCTTTATCTATACGGTATTTTTCCCGACCCAATCCCAGAAACAGTTACTCTTCAAGGATTGGATTCTCA
ACTGGTCTATAGTCAAATTATTGATGGATTTACGTTTTTATATTCAGAAGCAAAACAAGAAAAATATTTAGCATCTCGGC
GGAATTTAATCAGCCATGAAAAGGTGTTAGAACAAGCGATGCACGCTGGATTTAGAACTTTGTTACCCTTGCGTTTTGGA
TTAGTTGTCAAAAATTGGGAAACGGTAGTTACACAACTACTTCAACCATATAAAGCACAATTAAGAGAGCTATTCCAGAA
ATTAGCTGGGAGACGGGAGGTTAGTGTGAAGATTTTTTGGGATAGCAAAGCTGAATTACAAGCAATGATGGATTCTCATC
AAGACTTAAAGCAGAAGCGCGACCAAATGGAAGGAAAGGCATTAAGTATGGAGGAGGTAATACACATTGGACAATTAATT
GAAAGTAATTTACTAAGTCGCAAGGAATCTATAATTCAAGTCTTTTTTGATGAGCTAAAACCCTTAGCAGATGAGGTTAT
TGAAAGTGATCCAATGACAGAAGACATGATTTATAATGCGGCATTTTTGATCCCTTGGGAAAACGAATCTATATTTAGCC
AACAAGTCGAATCTATTGATCACAAATTCGATGAACGTTTACGCATTCGCTACAACAACTTTACAGCACCTTATACATTT
GCTCAAATTTCTTGA

Upstream 100 bases:

>100_bases
TAATTATAAGTAAAAGAGAACAGAGGAAAGTCAGGTGGGTAATACCCACCTTAATCTACGCATCACGGGCAATTCTCACC
CTAATTGAATTTTGAATTTT

Downstream 100 bases:

>100_bases
TAGGAGTTATACAATGCTAGGTAAAATCTTGTTATTGCCTGTTATGGGGCCAATTAATGGACTTATGTGGATTGGAGAAC
AAATTCAAGAACGTACCAAT

Product: gas vesicle protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MSSGLYLYGIFPDPIPETVTLQGLDSQLVYSQIIDGFTFLYSEAKQEKYLASRRNLISHEKVLEQAMHAGFRTLLPLRFG
LVVKNWETVVTQLLQPYKAQLRELFQKLAGRREVSVKIFWDSKAELQAMMDSHQDLKQKRDQMEGKALSMEEVIHIGQLI
ESNLLSRKESIIQVFFDELKPLADEVIESDPMTEDMIYNAAFLIPWENESIFSQQVESIDHKFDERLRIRYNNFTAPYTF
AQIS

Sequences:

>Translated_244_residues
MSSGLYLYGIFPDPIPETVTLQGLDSQLVYSQIIDGFTFLYSEAKQEKYLASRRNLISHEKVLEQAMHAGFRTLLPLRFG
LVVKNWETVVTQLLQPYKAQLRELFQKLAGRREVSVKIFWDSKAELQAMMDSHQDLKQKRDQMEGKALSMEEVIHIGQLI
ESNLLSRKESIIQVFFDELKPLADEVIESDPMTEDMIYNAAFLIPWENESIFSQQVESIDHKFDERLRIRYNNFTAPYTF
AQIS
>Mature_243_residues
SSGLYLYGIFPDPIPETVTLQGLDSQLVYSQIIDGFTFLYSEAKQEKYLASRRNLISHEKVLEQAMHAGFRTLLPLRFGL
VVKNWETVVTQLLQPYKAQLRELFQKLAGRREVSVKIFWDSKAELQAMMDSHQDLKQKRDQMEGKALSMEEVIHIGQLIE
SNLLSRKESIIQVFFDELKPLADEVIESDPMTEDMIYNAAFLIPWENESIFSQQVESIDHKFDERLRIRYNNFTAPYTFA
QIS

Specific function: May play a structural or regulatory role in gas vesicle synthesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Vacuole, gas vesicle (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009430 [H]

Pfam domain/function: PF06386 GvpL_GvpF [H]

EC number: NA

Molecular weight: Translated: 28393; Mature: 28262

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSGLYLYGIFPDPIPETVTLQGLDSQLVYSQIIDGFTFLYSEAKQEKYLASRRNLISHE
CCCCEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVLEQAMHAGFRTLLPLRFGLVVKNWETVVTQLLQPYKAQLRELFQKLAGRREVSVKIFW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
DSKAELQAMMDSHQDLKQKRDQMEGKALSMEEVIHIGQLIESNLLSRKESIIQVFFDELK
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLADEVIESDPMTEDMIYNAAFLIPWENESIFSQQVESIDHKFDERLRIRYNNFTAPYTF
HHHHHHHCCCCCCHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCEEE
AQIS
EECC
>Mature Secondary Structure 
SSGLYLYGIFPDPIPETVTLQGLDSQLVYSQIIDGFTFLYSEAKQEKYLASRRNLISHE
CCCEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVLEQAMHAGFRTLLPLRFGLVVKNWETVVTQLLQPYKAQLRELFQKLAGRREVSVKIFW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
DSKAELQAMMDSHQDLKQKRDQMEGKALSMEEVIHIGQLIESNLLSRKESIIQVFFDELK
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLADEVIESDPMTEDMIYNAAFLIPWENESIFSQQVESIDHKFDERLRIRYNNFTAPYTF
HHHHHHHCCCCCCHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCEEE
AQIS
EECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9063646 [H]