| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229669
Identifier: 17229669
GI number: 17229669
Start: 2617118
End: 2618002
Strand: Reverse
Name: 17229669
Synonym: all2177
Alternate gene names: NA
Gene position: 2618002-2617118 (Counterclockwise)
Preceding gene: 17229672
Following gene: 17229663
Centisome position: 40.82
GC content: 40.79
Gene sequence:
>885_bases ATGCGTCGAGATTCGATATTTTATAAACTATTTCAACAATCTCCCAGTTTGTTATTTGAGTTATTGACAAATCCACCAAG TAATGCAGATGAATATATATTTGATTCGGTAGCTGTTAAAGAGCCTAAATTTGAAATTGACGGTGTATTTTTACCTCCAC AAAATCAAAATCCTGGGGTTGTTTACTTCTGTGAGGTGCAGTTTCAACGGGATGAAAGACTATACGAAAGGGTGTTTGCA GAAACCTATCTGTACTTTTATCGCAACCGTGACAGGTTTAGCAATTTACAAATCGTCATCATTTACCCATCCCACAGCTT AGAACAAACTGATATTAGTCCTTACCTGAGTCAACTTAATAGCCCCCAGGTACATCGGATATATTTAGATGAGTTAGGAG ATATTCGTTCTTTACCTGTGTGGGTTGGGTTGATGGTGTTGACTACCCTGGAAGAAAATCGTGCAACCGAAGAAGCAAGA TACTTACTAGCAAGAAGTCAACAGGAAGTACCTCAACCAGAAAATCGTGCCATCATAGATTTATTGACGACAATCATGGT TTATAAATTTGAAGGTAAAAGCCGACGGGAGGTCGAAGAGATGTTAGGAATTACACTCAAAGAAACACGGGTTTACCGCG AAATCAAGGAAGAAGGAAGGGAAGAAGGAAGGGAAGAAGGAAGGGAGGAAGGAAGGGAAGAAGGAGAAAAATCGCTCGTT TTGCGTCAATTAAATCGACGTGTAGGGATGTTACCGCAGGAAGTGCGATCGCAGGTTGAATCCCTTTCGTTGGAACAATT GGAAAATCTCGGTGAGGCGTTGCTTGATTTTACCAGCATGGCTGATTTAGATGCTTGGTTGTCGGGGTTGGATGCTAATT CTTAA
Upstream 100 bases:
>100_bases CAATGGACACGCTGCGCGTTTACGCAGTGTAGCGAAGCTAACGCGTATCGCTAAACATCTATTTGCTGCTAAAATGCCCC CAGGTTTAAGCCAATCTTCC
Downstream 100 bases:
>100_bases GCAGGGATCGCTAACACTAAGCTGTAAATTAACGCACATTTTCTAGCTTTCATCGATATGTCGCACAAGGTGTTTATCCA GTTGGGGTGATGGGTTACAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MRRDSIFYKLFQQSPSLLFELLTNPPSNADEYIFDSVAVKEPKFEIDGVFLPPQNQNPGVVYFCEVQFQRDERLYERVFA ETYLYFYRNRDRFSNLQIVIIYPSHSLEQTDISPYLSQLNSPQVHRIYLDELGDIRSLPVWVGLMVLTTLEENRATEEAR YLLARSQQEVPQPENRAIIDLLTTIMVYKFEGKSRREVEEMLGITLKETRVYREIKEEGREEGREEGREEGREEGEKSLV LRQLNRRVGMLPQEVRSQVESLSLEQLENLGEALLDFTSMADLDAWLSGLDANS
Sequences:
>Translated_294_residues MRRDSIFYKLFQQSPSLLFELLTNPPSNADEYIFDSVAVKEPKFEIDGVFLPPQNQNPGVVYFCEVQFQRDERLYERVFA ETYLYFYRNRDRFSNLQIVIIYPSHSLEQTDISPYLSQLNSPQVHRIYLDELGDIRSLPVWVGLMVLTTLEENRATEEAR YLLARSQQEVPQPENRAIIDLLTTIMVYKFEGKSRREVEEMLGITLKETRVYREIKEEGREEGREEGREEGREEGEKSLV LRQLNRRVGMLPQEVRSQVESLSLEQLENLGEALLDFTSMADLDAWLSGLDANS >Mature_294_residues MRRDSIFYKLFQQSPSLLFELLTNPPSNADEYIFDSVAVKEPKFEIDGVFLPPQNQNPGVVYFCEVQFQRDERLYERVFA ETYLYFYRNRDRFSNLQIVIIYPSHSLEQTDISPYLSQLNSPQVHRIYLDELGDIRSLPVWVGLMVLTTLEENRATEEAR YLLARSQQEVPQPENRAIIDLLTTIMVYKFEGKSRREVEEMLGITLKETRVYREIKEEGREEGREEGREEGREEGEKSLV LRQLNRRVGMLPQEVRSQVESLSLEQLENLGEALLDFTSMADLDAWLSGLDANS
Specific function: Unknown
COG id: COG5464
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34376; Mature: 34376
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRDSIFYKLFQQSPSLLFELLTNPPSNADEYIFDSVAVKEPKFEIDGVFLPPQNQNPGV CCCHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEECEEECCCCCCCCCE VYFCEVQFQRDERLYERVFAETYLYFYRNRDRFSNLQIVIIYPSHSLEQTDISPYLSQLN EEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCC SPQVHRIYLDELGDIRSLPVWVGLMVLTTLEENRATEEARYLLARSQQEVPQPENRAIID CCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LLTTIMVYKFEGKSRREVEEMLGITLKETRVYREIKEEGREEGREEGREEGREEGEKSLV HHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRQLNRRVGMLPQEVRSQVESLSLEQLENLGEALLDFTSMADLDAWLSGLDANS HHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRRDSIFYKLFQQSPSLLFELLTNPPSNADEYIFDSVAVKEPKFEIDGVFLPPQNQNPGV CCCHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEECEEECCCCCCCCCE VYFCEVQFQRDERLYERVFAETYLYFYRNRDRFSNLQIVIIYPSHSLEQTDISPYLSQLN EEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCC SPQVHRIYLDELGDIRSLPVWVGLMVLTTLEENRATEEARYLLARSQQEVPQPENRAIID CCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LLTTIMVYKFEGKSRREVEEMLGITLKETRVYREIKEEGREEGREEGREEGREEGEKSLV HHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRQLNRRVGMLPQEVRSQVESLSLEQLENLGEALLDFTSMADLDAWLSGLDANS HHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA