| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229663
Identifier: 17229663
GI number: 17229663
Start: 2608409
End: 2610853
Strand: Reverse
Name: 17229663
Synonym: all2171
Alternate gene names: NA
Gene position: 2610853-2608409 (Counterclockwise)
Preceding gene: 17229669
Following gene: 17229662
Centisome position: 40.71
GC content: 40.49
Gene sequence:
>2445_bases GTGAAAAATATGGCCAAATTTAAGTTTTTAATCGGGAACATCAGTATTTCATTATGTTTATTAAACTTTACAGCCGCAAA AGCAGAAATTATTCCTGATGATACGCTTCCTACTAACTCTATTGTTAGACCTGTAGGGAACATCCGAGTAATTGAGGGAG GTACTCAAAGGGGAGAAAATTTATTTCATAGTTTTAGGGAATTTTCTTTTTCTGTTTTAACTAGCAATGTTACAGGAAAT GTTGCTATTTTTAACCACAATTTGGCAGTGCGAAACATTATTACTAGAATTACTGGTGGCTCACATAGTTATATTGATGG TTTGATTACAGCCGCCTCAGGTAGTAGAGCTAATTTGTTTTTGATTAATCCCCAGGGCATAATTTTTGGGGCAAATGCTA GTTTAAATATTGGTGGTTCTTTTGTGGCGACGACTGCAAATAGTATCAAGTTTGCTGATGGGTTAGAATTTAATGCAACT ACTAATAATAATACTTCTTTATTAACAGTAAATGTTCCTGTAGGGTTACAATTTGGTGATAGTCCGGGAAATATTGAACA GCCGATTGTTGCTGATTTACCTTTGGGATTGCAAGTAGGAAATGGCAGAACTTTAGGATTAATCGGTGGGAATTTATTAT TAGAAAGTAGTCTTTTGGAAGCGCCAGGGGGGAGAGTTGAGCTAGGTAGCGTTACTGGAGGTGGTTTTGTCAGCCTCAGC CAAGTTGATGATGCTTACGCTGCTGGATATTCAGGTGTACAAAATTTTGGAGATATCAGGCTTGCGGCTGGAACTTTAGT TAATACTGGTAGTATCCCCATGCAAGATAGTGGTGGTGCAATTCAAATTCAAGGGAGAAATGTCACTATTGACGATTCAC TAGTTTTTGCAGTTAATTTTGGTTTGCAAACAGGAAATAGCCTCATTGTTAATGCTACTGAATCTTTAAAAGTAGGTGGT ATTTCTAATATCTTGACTATTGCTCAATCTCAAGCTAAGGCGGGAGATATTTGGATTACGGCTAAAGATTCGGTAGAACT GGGGGAAGAATCATTTATTGGTTCACAGGTCTGTTCTTTAGGGGAAAGTTGTGCCAATGTGACAGGTAATGGTGGCAATT TGACCATTGAAACTAGGCGACTTTTACTAACAGATGGTGCAGGGATAGAAGCTTCTACATTTGGTGCAGGAAACACGGGA AATATTTTAGTTAGAGCTACAGATTCTATAGATTTGAGGGGAGAAAGTGCCGATGGCGATATTCCCAGTGGAATTTTCGC GCAAGTTGCCCCCGATGCTCCAGAAAATGCAGGTAATACTGGCACAATTACCTTAGAAACTCAACAGTTAAATATTCAAG GTGGCGCACAAATATCTAATGTTTCTAGGTATGGAAGTCAGGGGGGAGACCTATTGATTAATGCCTCAGCAGGTATGCAA GTGAGTGGTACTTCCCAATTTGCTACAGCCTCATCTTTAGATATTTTTCGTAGTGGGATTTTTGCTGTAACTCAAGCAGG AACTACCACCAATGACAGCACATTAAATATCAATACTGGATTACTGACTGTAGAAAACGGAGCCAGGATAACGGCAGATA ACTTAAATATTGTAGGCGATCGCCTAATTATTCAAAATGGGGCAGAAGTTACGGTGGCTGGAGAGTCGGGAAATTTATCT ATCAAGGCGCGATCGCTTAAACTAGATAACCAAAGTCAATTGATTGCTCAAACTACCTCCGGTAATGGTGGCAATATAAA TCTCAATCTCAGCGCCATATTGCGACTACGCCTTAATAGTCAAATTTCTACATTTGCTGACGGTAATGGTGGCAACATCG AAATTAATAGCCCTTTCATTGTGGCAACTCCCAATGAAAATAACGACATCACCGCCAATGTGTTCGGGGGTGCAGGGGGT AGGGTGACAATCAGTACTCAGAAATTTCTTGGTTTAGTTGTGCGTAATCGAGGCGAACTTGAGCAAATTTTAGGGACTAC CGACCCAAATCAGCTTGACTCAGGATTTCTACTCACCAATGATATCCTGACTTTCTCACAGGCCAGCCCATCTTTCACAA GTATGGTCACAATTAACCAGCCGGATGTAGACTCTCGTCAGAGATTTGCTGCGTTCTCTACAAATCCCATCAATACATCC AGGCTAACCCAGGTTTGTAGTTCAGATGGTGAGACAGAACCAGGACTGAAAGCAACTTTTCCAGGAGACAGGGAAACCAA AAATTCCCCCAGTCCTCACCATTTGTTAACAATCAGTAATTTTACGCCCATTAATGTTGTGGATAACCCTGATTCCCCTA AAATTGTGGAAGCACAGGGATGGGTGATGGATACCAATGGCAATATTGCTTTAGTTGCTCCAGTTCCTACTGTTAATCAT CAACATCCCTGGTTTTCGTCCACCATCTGCCATATTCATGAATAA
Upstream 100 bases:
>100_bases TTATAAATAATTGATTTAAAAAATATAAATAACCCTAAAATAAAGTCCGTTTTTTTTCACACAAATCAGATATTAGTTGT AATTATTCTTATTTGATTTT
Downstream 100 bases:
>100_bases AACTACTAGGGTCTATTATCCTGATTTTGTTACAGGAAGAATACGGAAGATAAAGGGTAAGCTGGTCAAGTCCTTACGTT TGGCTTTGTGCTTTCTGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Filamentous Hemagglutinin Family Outer Membrane Protein; Filamentous Haemagglutinin Outer Membrane Protein; Filamentous Haemagglutinin Family N-Terminal Domain Protein; Filamentous Haemagglutinin-Like Protein; Hemagglutination Activity Domain-Containing Protein; Filamentous Haemagglutinin-Like; Filamentous Haemagglutinin-Like Protein Protein; Heme Utilization/Adhesion Protein
Number of amino acids: Translated: 814; Mature: 814
Protein sequence:
>814_residues MKNMAKFKFLIGNISISLCLLNFTAAKAEIIPDDTLPTNSIVRPVGNIRVIEGGTQRGENLFHSFREFSFSVLTSNVTGN VAIFNHNLAVRNIITRITGGSHSYIDGLITAASGSRANLFLINPQGIIFGANASLNIGGSFVATTANSIKFADGLEFNAT TNNNTSLLTVNVPVGLQFGDSPGNIEQPIVADLPLGLQVGNGRTLGLIGGNLLLESSLLEAPGGRVELGSVTGGGFVSLS QVDDAYAAGYSGVQNFGDIRLAAGTLVNTGSIPMQDSGGAIQIQGRNVTIDDSLVFAVNFGLQTGNSLIVNATESLKVGG ISNILTIAQSQAKAGDIWITAKDSVELGEESFIGSQVCSLGESCANVTGNGGNLTIETRRLLLTDGAGIEASTFGAGNTG NILVRATDSIDLRGESADGDIPSGIFAQVAPDAPENAGNTGTITLETQQLNIQGGAQISNVSRYGSQGGDLLINASAGMQ VSGTSQFATASSLDIFRSGIFAVTQAGTTTNDSTLNINTGLLTVENGARITADNLNIVGDRLIIQNGAEVTVAGESGNLS IKARSLKLDNQSQLIAQTTSGNGGNINLNLSAILRLRLNSQISTFADGNGGNIEINSPFIVATPNENNDITANVFGGAGG RVTISTQKFLGLVVRNRGELEQILGTTDPNQLDSGFLLTNDILTFSQASPSFTSMVTINQPDVDSRQRFAAFSTNPINTS RLTQVCSSDGETEPGLKATFPGDRETKNSPSPHHLLTISNFTPINVVDNPDSPKIVEAQGWVMDTNGNIALVAPVPTVNH QHPWFSSTICHIHE
Sequences:
>Translated_814_residues MKNMAKFKFLIGNISISLCLLNFTAAKAEIIPDDTLPTNSIVRPVGNIRVIEGGTQRGENLFHSFREFSFSVLTSNVTGN VAIFNHNLAVRNIITRITGGSHSYIDGLITAASGSRANLFLINPQGIIFGANASLNIGGSFVATTANSIKFADGLEFNAT TNNNTSLLTVNVPVGLQFGDSPGNIEQPIVADLPLGLQVGNGRTLGLIGGNLLLESSLLEAPGGRVELGSVTGGGFVSLS QVDDAYAAGYSGVQNFGDIRLAAGTLVNTGSIPMQDSGGAIQIQGRNVTIDDSLVFAVNFGLQTGNSLIVNATESLKVGG ISNILTIAQSQAKAGDIWITAKDSVELGEESFIGSQVCSLGESCANVTGNGGNLTIETRRLLLTDGAGIEASTFGAGNTG NILVRATDSIDLRGESADGDIPSGIFAQVAPDAPENAGNTGTITLETQQLNIQGGAQISNVSRYGSQGGDLLINASAGMQ VSGTSQFATASSLDIFRSGIFAVTQAGTTTNDSTLNINTGLLTVENGARITADNLNIVGDRLIIQNGAEVTVAGESGNLS IKARSLKLDNQSQLIAQTTSGNGGNINLNLSAILRLRLNSQISTFADGNGGNIEINSPFIVATPNENNDITANVFGGAGG RVTISTQKFLGLVVRNRGELEQILGTTDPNQLDSGFLLTNDILTFSQASPSFTSMVTINQPDVDSRQRFAAFSTNPINTS RLTQVCSSDGETEPGLKATFPGDRETKNSPSPHHLLTISNFTPINVVDNPDSPKIVEAQGWVMDTNGNIALVAPVPTVNH QHPWFSSTICHIHE >Mature_814_residues MKNMAKFKFLIGNISISLCLLNFTAAKAEIIPDDTLPTNSIVRPVGNIRVIEGGTQRGENLFHSFREFSFSVLTSNVTGN VAIFNHNLAVRNIITRITGGSHSYIDGLITAASGSRANLFLINPQGIIFGANASLNIGGSFVATTANSIKFADGLEFNAT TNNNTSLLTVNVPVGLQFGDSPGNIEQPIVADLPLGLQVGNGRTLGLIGGNLLLESSLLEAPGGRVELGSVTGGGFVSLS QVDDAYAAGYSGVQNFGDIRLAAGTLVNTGSIPMQDSGGAIQIQGRNVTIDDSLVFAVNFGLQTGNSLIVNATESLKVGG ISNILTIAQSQAKAGDIWITAKDSVELGEESFIGSQVCSLGESCANVTGNGGNLTIETRRLLLTDGAGIEASTFGAGNTG NILVRATDSIDLRGESADGDIPSGIFAQVAPDAPENAGNTGTITLETQQLNIQGGAQISNVSRYGSQGGDLLINASAGMQ VSGTSQFATASSLDIFRSGIFAVTQAGTTTNDSTLNINTGLLTVENGARITADNLNIVGDRLIIQNGAEVTVAGESGNLS IKARSLKLDNQSQLIAQTTSGNGGNINLNLSAILRLRLNSQISTFADGNGGNIEINSPFIVATPNENNDITANVFGGAGG RVTISTQKFLGLVVRNRGELEQILGTTDPNQLDSGFLLTNDILTFSQASPSFTSMVTINQPDVDSRQRFAAFSTNPINTS RLTQVCSSDGETEPGLKATFPGDRETKNSPSPHHLLTISNFTPINVVDNPDSPKIVEAQGWVMDTNGNIALVAPVPTVNH QHPWFSSTICHIHE
Specific function: Unknown
COG id: COG3210
COG function: function code U; Large exoproteins involved in heme utilization or adhesion
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84834; Mature: 84834
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNMAKFKFLIGNISISLCLLNFTAAKAEIIPDDTLPTNSIVRPVGNIRVIEGGTQRGEN CCCCCEEEEEEECEEEEEEEEEEECCEEEECCCCCCCCCHHHCCCCCEEEEECCCCCCHH LFHSFREFSFSVLTSNVTGNVAIFNHNLAVRNIITRITGGSHSYIDGLITAASGSRANLF HHHHHHHCEEEEEEECCCCCEEEEECCHHHHHHHHHCCCCCCHHCCEEEEECCCCCEEEE LINPQGIIFGANASLNIGGSFVATTANSIKFADGLEFNATTNNNTSLLTVNVPVGLQFGD EECCCCEEEECCCEEECCCEEEEECCCCEEEECCCEEEEECCCCCEEEEEEECEEEEECC SPGNIEQPIVADLPLGLQVGNGRTLGLIGGNLLLESSLLEAPGGRVELGSVTGGGFVSLS CCCCCCCCEEECCCCCEEECCCCEEEEECCCEEEECHHHHCCCCEEEEEEECCCCEEEEE QVDDAYAAGYSGVQNFGDIRLAAGTLVNTGSIPMQDSGGAIQIQGRNVTIDDSLVFAVNF CCCCHHHCCCCCCCCCCCEEEEECEEEECCCCCEECCCCEEEEECCEEEECCCEEEEEEE GLQTGNSLIVNATESLKVGGISNILTIAQSQAKAGDIWITAKDSVELGEESFIGSQVCSL CCCCCCEEEEEECCCEEECCCHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH GESCANVTGNGGNLTIETRRLLLTDGAGIEASTFGAGNTGNILVRATDSIDLRGESADGD CHHHHCCCCCCCEEEEEEEEEEEECCCCCEEEECCCCCCCCEEEEEECCEEEECCCCCCC IPSGIFAQVAPDAPENAGNTGTITLETQQLNIQGGAQISNVSRYGSQGGDLLINASAGMQ CCCCCEEEECCCCCCCCCCEEEEEEEEEEEEECCCCEECHHHHCCCCCCCEEEECCCCEE VSGTSQFATASSLDIFRSGIFAVTQAGTTTNDSTLNINTGLLTVENGARITADNLNIVGD ECCCCCCCCCCHHHHHHCCEEEEEECCCCCCCCEEEEECCEEEECCCCEEEECCCEEEEC RLIIQNGAEVTVAGESGNLSIKARSLKLDNQSQLIAQTTSGNGGNINLNLSAILRLRLNS EEEEECCCEEEEECCCCCEEEEEEEEECCCCCEEEEEECCCCCCEEEEEHHEEEEEEECC QISTFADGNGGNIEINSPFIVATPNENNDITANVFGGAGGRVTISTQKFLGLVVRNRGEL CEEEEECCCCCEEEECCCEEEECCCCCCCEEEEEECCCCCEEEEEHHHEEEEEECCCCCH EQILGTTDPNQLDSGFLLTNDILTFSQASPSFTSMVTINQPDVDSRQRFAAFSTNPINTS HHHHCCCCCCCCCCCEEEEECEEEECCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCHH RLTQVCSSDGETEPGLKATFPGDRETKNSPSPHHLLTISNFTPINVVDNPDSPKIVEAQG HHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCEEEECC WVMDTNGNIALVAPVPTVNHQHPWFSSTICHIHE EEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure MKNMAKFKFLIGNISISLCLLNFTAAKAEIIPDDTLPTNSIVRPVGNIRVIEGGTQRGEN CCCCCEEEEEEECEEEEEEEEEEECCEEEECCCCCCCCCHHHCCCCCEEEEECCCCCCHH LFHSFREFSFSVLTSNVTGNVAIFNHNLAVRNIITRITGGSHSYIDGLITAASGSRANLF HHHHHHHCEEEEEEECCCCCEEEEECCHHHHHHHHHCCCCCCHHCCEEEEECCCCCEEEE LINPQGIIFGANASLNIGGSFVATTANSIKFADGLEFNATTNNNTSLLTVNVPVGLQFGD EECCCCEEEECCCEEECCCEEEEECCCCEEEECCCEEEEECCCCCEEEEEEECEEEEECC SPGNIEQPIVADLPLGLQVGNGRTLGLIGGNLLLESSLLEAPGGRVELGSVTGGGFVSLS CCCCCCCCEEECCCCCEEECCCCEEEEECCCEEEECHHHHCCCCEEEEEEECCCCEEEEE QVDDAYAAGYSGVQNFGDIRLAAGTLVNTGSIPMQDSGGAIQIQGRNVTIDDSLVFAVNF CCCCHHHCCCCCCCCCCCEEEEECEEEECCCCCEECCCCEEEEECCEEEECCCEEEEEEE GLQTGNSLIVNATESLKVGGISNILTIAQSQAKAGDIWITAKDSVELGEESFIGSQVCSL CCCCCCEEEEEECCCEEECCCHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH GESCANVTGNGGNLTIETRRLLLTDGAGIEASTFGAGNTGNILVRATDSIDLRGESADGD CHHHHCCCCCCCEEEEEEEEEEEECCCCCEEEECCCCCCCCEEEEEECCEEEECCCCCCC IPSGIFAQVAPDAPENAGNTGTITLETQQLNIQGGAQISNVSRYGSQGGDLLINASAGMQ CCCCCEEEECCCCCCCCCCEEEEEEEEEEEEECCCCEECHHHHCCCCCCCEEEECCCCEE VSGTSQFATASSLDIFRSGIFAVTQAGTTTNDSTLNINTGLLTVENGARITADNLNIVGD ECCCCCCCCCCHHHHHHCCEEEEEECCCCCCCCEEEEECCEEEECCCCEEEECCCEEEEC RLIIQNGAEVTVAGESGNLSIKARSLKLDNQSQLIAQTTSGNGGNINLNLSAILRLRLNS EEEEECCCEEEEECCCCCEEEEEEEEECCCCCEEEEEECCCCCCEEEEEHHEEEEEEECC QISTFADGNGGNIEINSPFIVATPNENNDITANVFGGAGGRVTISTQKFLGLVVRNRGEL CEEEEECCCCCEEEECCCEEEECCCCCCCEEEEEECCCCCEEEEEHHHEEEEEECCCCCH EQILGTTDPNQLDSGFLLTNDILTFSQASPSFTSMVTINQPDVDSRQRFAAFSTNPINTS HHHHCCCCCCCCCCCEEEEECEEEECCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCHH RLTQVCSSDGETEPGLKATFPGDRETKNSPSPHHLLTISNFTPINVVDNPDSPKIVEAQG HHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCEEEECC WVMDTNGNIALVAPVPTVNHQHPWFSSTICHIHE EEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA