Click here to switch to the map view.

The map label for this gene is yhfQ [H]

Identifier: 17229668

GI number: 17229668

Start: 2615954

End: 2616922

Strand: Direct

Name: yhfQ [H]

Synonym: alr2176

Alternate gene names: 17229668

Gene position: 2615954-2616922 (Clockwise)

Preceding gene: 17229667

Following gene: 17229670

Centisome position: 40.79

GC content: 36.74

Gene sequence:

>969_bases
ATGGGAAATCAGCTATGTCGTCTAAATAAGCCATTTTTAATCATGGCTATTTCCTTACTTTTAATTACTGCTTGTTATCA
ACCTGTTATCCAAAAACCTCATATTTCCCAACAGCATCCTGTGGAGTGTCGAGTTATTAAGCATGAATTAGGTGAAACCT
GTGTCCCACTTAAACCACGGCGCATTATTGCATTAGACCCAGAAAACACACTCGATCCCCTGGTAGCTCTCGGTATCAAA
CCGATTGGTTTTGGGTCTTATACGCACAAAGGAGAAGAATCTCTTCATGGCGTATCATTAGATGAAGTGAAAGGAGCTAC
GAATGTTGGAAATGCTTATCAGCCTTCATTAGAAAAAATTTTGATGCTCAAACCCGACTTAATTTTATCGACAAATGCAC
ATCAATATAAGTTATTAACAGCGATCGCTCCTACTGTTCCTGTACCCTACCCAAATTATACAATGCTAGTTGATCAGGCT
TTCTTTAAAGAAAACCTGCGATATGTTGCTAAAATAGTTGGTAAGGAAGCAAAAGCAGAGGAAGTTTTAAATCAATACCA
GATAAGAATTGAAGAATTAAAAAAACGTATAGGAAATCATCTGGAACAAGTAGAAATTTCCGTATTGTTTCATACTGGTG
GTTATATATGGACAACCATTAAAGGTATTCAGCCAATTTCCCCAATTCTAACTGATATAGGGATACGTCATAAATTTGCA
CTTCCTGGTAATGGTGGGTGGAATCTCAGTATTGAAAAAATCGGTGAGTACGATTCAGATATTCTGTTTATAGTTGATGT
TGACCGCAGAGGAGCAAGTTTTTATTTCCAAAATCCCATATTTAGCAGTCTGAAAGCATTCAAAAACAATCGAGTTTATT
TTGTGGACAAAGTAGGATGGTATACGCTAGGTATATCAGGAGCTAATAAGACATTGGATGACTTGTTTAAATATTTGCCA
TACCAGTGA

Upstream 100 bases:

>100_bases
AGCTATTGATTTTTCTCTAGAATCTGCTGGGGATGATGTCAAAAACAAATTAATATCATCCCACAAGCATTTTATCTTTA
AACTTGTCACAAAGAGCGTA

Downstream 100 bases:

>100_bases
AAAAAGTAAACATTTACATCGCTTTTAGCTTTCCTAGAGTTCTTAAAAGCTACGAAAACCTCTTGATTTTGAATGCGATC
GCCAATCTTGTCACAGTGTA

Product: iron(III) dicitrate-binding protein of ABC transporter

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MGNQLCRLNKPFLIMAISLLLITACYQPVIQKPHISQQHPVECRVIKHELGETCVPLKPRRIIALDPENTLDPLVALGIK
PIGFGSYTHKGEESLHGVSLDEVKGATNVGNAYQPSLEKILMLKPDLILSTNAHQYKLLTAIAPTVPVPYPNYTMLVDQA
FFKENLRYVAKIVGKEAKAEEVLNQYQIRIEELKKRIGNHLEQVEISVLFHTGGYIWTTIKGIQPISPILTDIGIRHKFA
LPGNGGWNLSIEKIGEYDSDILFIVDVDRRGASFYFQNPIFSSLKAFKNNRVYFVDKVGWYTLGISGANKTLDDLFKYLP
YQ

Sequences:

>Translated_322_residues
MGNQLCRLNKPFLIMAISLLLITACYQPVIQKPHISQQHPVECRVIKHELGETCVPLKPRRIIALDPENTLDPLVALGIK
PIGFGSYTHKGEESLHGVSLDEVKGATNVGNAYQPSLEKILMLKPDLILSTNAHQYKLLTAIAPTVPVPYPNYTMLVDQA
FFKENLRYVAKIVGKEAKAEEVLNQYQIRIEELKKRIGNHLEQVEISVLFHTGGYIWTTIKGIQPISPILTDIGIRHKFA
LPGNGGWNLSIEKIGEYDSDILFIVDVDRRGASFYFQNPIFSSLKAFKNNRVYFVDKVGWYTLGISGANKTLDDLFKYLP
YQ
>Mature_321_residues
GNQLCRLNKPFLIMAISLLLITACYQPVIQKPHISQQHPVECRVIKHELGETCVPLKPRRIIALDPENTLDPLVALGIKP
IGFGSYTHKGEESLHGVSLDEVKGATNVGNAYQPSLEKILMLKPDLILSTNAHQYKLLTAIAPTVPVPYPNYTMLVDQAF
FKENLRYVAKIVGKEAKAEEVLNQYQIRIEELKKRIGNHLEQVEISVLFHTGGYIWTTIKGIQPISPILTDIGIRHKFAL
PGNGGWNLSIEKIGEYDSDILFIVDVDRRGASFYFQNPIFSSLKAFKNNRVYFVDKVGWYTLGISGANKTLDDLFKYLPY
Q

Specific function: Binds Citrate-Dependent Iron(III); Part Of The Binding- Protein-Dependent Transport System For Uptake Of Citrate-Dependent Iron(III). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 36293; Mature: 36162

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNQLCRLNKPFLIMAISLLLITACYQPVIQKPHISQQHPVECRVIKHELGETCVPLKPR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEHHHHCCCCCCCCCC
RIIALDPENTLDPLVALGIKPIGFGSYTHKGEESLHGVSLDEVKGATNVGNAYQPSLEKI
EEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHCCCCHHHHCCCCCCCCCCCCCHHHH
LMLKPDLILSTNAHQYKLLTAIAPTVPVPYPNYTMLVDQAFFKENLRYVAKIVGKEAKAE
EEECCCEEEECCCCCEEEEEHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHH
EVLNQYQIRIEELKKRIGNHLEQVEISVLFHTGGYIWTTIKGIQPISPILTDIGIRHKFA
HHHHHHHHHHHHHHHHHCCHHHEEEEEEEEECCCEEEEEECCCCCHHHHHHHCCCCEEEE
LPGNGGWNLSIEKIGEYDSDILFIVDVDRRGASFYFQNPIFSSLKAFKNNRVYFVDKVGW
CCCCCCCEEEHHCCCCCCCCEEEEEEECCCCCCEEECCHHHHHHHHHCCCCEEEEECCCE
YTLGISGANKTLDDLFKYLPYQ
EEEEECCCCCCHHHHHHHCCCC
>Mature Secondary Structure 
GNQLCRLNKPFLIMAISLLLITACYQPVIQKPHISQQHPVECRVIKHELGETCVPLKPR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEHHHHCCCCCCCCCC
RIIALDPENTLDPLVALGIKPIGFGSYTHKGEESLHGVSLDEVKGATNVGNAYQPSLEKI
EEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHCCCCHHHHCCCCCCCCCCCCCHHHH
LMLKPDLILSTNAHQYKLLTAIAPTVPVPYPNYTMLVDQAFFKENLRYVAKIVGKEAKAE
EEECCCEEEECCCCCEEEEEHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHHH
EVLNQYQIRIEELKKRIGNHLEQVEISVLFHTGGYIWTTIKGIQPISPILTDIGIRHKFA
HHHHHHHHHHHHHHHHHCCHHHEEEEEEEEECCCEEEEEECCCCCHHHHHHHCCCCEEEE
LPGNGGWNLSIEKIGEYDSDILFIVDVDRRGASFYFQNPIFSSLKAFKNNRVYFVDKVGW
CCCCCCCEEEHHCCCCCCCCEEEEEEECCCCCCEEECCHHHHHHHHHCCCCEEEEECCCE
YTLGISGANKTLDDLFKYLPYQ
EEEEECCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]