| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229661
Identifier: 17229661
GI number: 17229661
Start: 2605145
End: 2605627
Strand: Direct
Name: 17229661
Synonym: alr2169
Alternate gene names: NA
Gene position: 2605145-2605627 (Clockwise)
Preceding gene: 17229660
Following gene: 17229664
Centisome position: 40.62
GC content: 38.1
Gene sequence:
>483_bases ATGACCACTATGGCTGACCCAACTAACAGCAAAGTACCTGATAATCAACCAACACTTAAACAAGGTGATACAGGGGAAGT AGTCAAAGAACTACAAAGGCTATTAAGGAGTTATTATTGTTATTCTGGGCCTATTGATGGGGTTTTAGATTCAGAAACAG TTGGGGGAGTAATTTTATTTCAGCATCGGGTTTTTATCCCAGAAGATGGAATTGTTGGCTATAAAACTTGGCAAGCTCTA TATGAAGGAAGAGTAATTGATTTACCTATTTTGAAATATGGTAGCCAAGGTGAACTGGTTAAAGCCTTGCAACAAAGACT CCAAAATGCTGGATACTATACGGGATTGGTTGACGGAGATTTTAGCTTAGTTACGGAAGCAGGTGTAAAATCTTTTCAAC TACGAAATAACTTAAAAGTTGATGGTATTGTAGGCGATCGCACTTGGGCTGTTCTCAGCAATACACCTATTTTTGACAGT TAA
Upstream 100 bases:
>100_bases CCACTGAGGTAGTGAGAATTACTCAGCGTGGGTGAAATTTTAATTTGTCTGATGAATTGGCTTTTTTAGGATAAAAATCA CTCGATAGGGCGTATCAAGC
Downstream 100 bases:
>100_bases AGAATATAAGTTTTCCATTATCTAGATATGGAAAATTTATTATGTTATCTCCCCATTGATGCCAGATTATTAAGTATGCA AATCTCTCTTTTCCTTGACT
Product: hypothetical protein
Products: NA
Alternate protein names: Spore Cortex-Lytic; Bifunctional Protein N-Acetylmuramoyl-L-Alanine Amidase; N-Acetylmuramyl-L-Alanine Amidase; Penicillin-Resistant DD-Carboxypeptidase; Cell Wall Lytic Activity; Glycosy Hydrolase Family Protein; ErfK/YbiS/YcfS/YnhG Family Protein; EndopeptidaIID/LytB; Endopeptidase Cell Wall Lytic Activity; Penicillin-Resistant Dd-Carboxypeptidase-Like Protein; Endopeptidase LytF; NLP/P60 Protein
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MTTMADPTNSKVPDNQPTLKQGDTGEVVKELQRLLRSYYCYSGPIDGVLDSETVGGVILFQHRVFIPEDGIVGYKTWQAL YEGRVIDLPILKYGSQGELVKALQQRLQNAGYYTGLVDGDFSLVTEAGVKSFQLRNNLKVDGIVGDRTWAVLSNTPIFDS
Sequences:
>Translated_160_residues MTTMADPTNSKVPDNQPTLKQGDTGEVVKELQRLLRSYYCYSGPIDGVLDSETVGGVILFQHRVFIPEDGIVGYKTWQAL YEGRVIDLPILKYGSQGELVKALQQRLQNAGYYTGLVDGDFSLVTEAGVKSFQLRNNLKVDGIVGDRTWAVLSNTPIFDS >Mature_159_residues TTMADPTNSKVPDNQPTLKQGDTGEVVKELQRLLRSYYCYSGPIDGVLDSETVGGVILFQHRVFIPEDGIVGYKTWQALY EGRVIDLPILKYGSQGELVKALQQRLQNAGYYTGLVDGDFSLVTEAGVKSFQLRNNLKVDGIVGDRTWAVLSNTPIFDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17691; Mature: 17560
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTMADPTNSKVPDNQPTLKQGDTGEVVKELQRLLRSYYCYSGPIDGVLDSETVGGVILF CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE QHRVFIPEDGIVGYKTWQALYEGRVIDLPILKYGSQGELVKALQQRLQNAGYYTGLVDGD EEEEECCCCCCCCHHHHHHHHCCCEEEEHHEEECCCCHHHHHHHHHHHHCCCEEEEECCC FSLVTEAGVKSFQLRNNLKVDGIVGDRTWAVLSNTPIFDS HHHHHHHCCHHEECCCCCEEEEEECCCEEEEEECCCCCCC >Mature Secondary Structure TTMADPTNSKVPDNQPTLKQGDTGEVVKELQRLLRSYYCYSGPIDGVLDSETVGGVILF CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE QHRVFIPEDGIVGYKTWQALYEGRVIDLPILKYGSQGELVKALQQRLQNAGYYTGLVDGD EEEEECCCCCCCCHHHHHHHHCCCEEEEHHEEECCCCHHHHHHHHHHHHCCCEEEEECCC FSLVTEAGVKSFQLRNNLKVDGIVGDRTWAVLSNTPIFDS HHHHHHHCCHHEECCCCCEEEEEECCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA