| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229648
Identifier: 17229648
GI number: 17229648
Start: 2587831
End: 2588247
Strand: Reverse
Name: 17229648
Synonym: all2156
Alternate gene names: NA
Gene position: 2588247-2587831 (Counterclockwise)
Preceding gene: 17229649
Following gene: 17229644
Centisome position: 40.35
GC content: 35.97
Gene sequence:
>417_bases ATGATCTTGATAAATACATATTTAATATCACTTAAAATCATGCCAAAATATAACCTATTTGTCTGTAAATCTTGTCACCC TTCTTCTCAAGAAAGACCAGAAAATCCTCCTTTTGATGGTGAAATTTTACTTGAAAAATTAAATTATTTATGTAGTGAAG AATCGTCACTTCATGAAATAGAAATTAAACCCGTTGAATGTTTGTGGGCTTGTAATCATGGTTGCGTTGTAGCTGCTTCA CACCCAGACAAACCCAGCTATCTTTTCGTCAATTTGACTCCAGAAGAAAGCGCAGCATCTTTACTAGAATTTATGCAATT GTATGTCAAGAGTCGTAAAGGTAACGTAGCTTGGAAACAATTACCTGAAGTGCTACAAGCTGCAATTTTCGCGCAAATTC CGCCTGGGGAAAGGTAG
Upstream 100 bases:
>100_bases TTATGGTCTAAACTCAAAGCTGTACAGCAAAATCAAGTTTACATAGTAGATTTTTCTGTTTGGCGGGGATTGAATATGCT TGCAGCTTATGCAATGCTCG
Downstream 100 bases:
>100_bases CGGTGGTTATATCTTTTTAGTATTATCCTCACTCAACTTCAGCGATTAAACCAAGCCTCTAGATCAGCCATTCCCTGAAA ATCTAACAGTGCTTCGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MILINTYLISLKIMPKYNLFVCKSCHPSSQERPENPPFDGEILLEKLNYLCSEESSLHEIEIKPVECLWACNHGCVVAAS HPDKPSYLFVNLTPEESAASLLEFMQLYVKSRKGNVAWKQLPEVLQAAIFAQIPPGER
Sequences:
>Translated_138_residues MILINTYLISLKIMPKYNLFVCKSCHPSSQERPENPPFDGEILLEKLNYLCSEESSLHEIEIKPVECLWACNHGCVVAAS HPDKPSYLFVNLTPEESAASLLEFMQLYVKSRKGNVAWKQLPEVLQAAIFAQIPPGER >Mature_138_residues MILINTYLISLKIMPKYNLFVCKSCHPSSQERPENPPFDGEILLEKLNYLCSEESSLHEIEIKPVECLWACNHGCVVAAS HPDKPSYLFVNLTPEESAASLLEFMQLYVKSRKGNVAWKQLPEVLQAAIFAQIPPGER
Specific function: Unknown
COG id: COG5469
COG function: function code S; Predicted metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15618; Mature: 15618
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILINTYLISLKIMPKYNLFVCKSCHPSSQERPENPPFDGEILLEKLNYLCSEESSLHEI CEEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEE EIKPVECLWACNHGCVVAASHPDKPSYLFVNLTPEESAASLLEFMQLYVKSRKGNVAWKQ ECCCEEEEEECCCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHH LPEVLQAAIFAQIPPGER HHHHHHHHHHHCCCCCCC >Mature Secondary Structure MILINTYLISLKIMPKYNLFVCKSCHPSSQERPENPPFDGEILLEKLNYLCSEESSLHEI CEEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEE EIKPVECLWACNHGCVVAASHPDKPSYLFVNLTPEESAASLLEFMQLYVKSRKGNVAWKQ ECCCEEEEEECCCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHH LPEVLQAAIFAQIPPGER HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA