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The map label for this gene is yfiY [H]

Identifier: 17229649

GI number: 17229649

Start: 2588213

End: 2589244

Strand: Reverse

Name: yfiY [H]

Synonym: all2157

Alternate gene names: 17229649

Gene position: 2589244-2588213 (Counterclockwise)

Preceding gene: 17229650

Following gene: 17229648

Centisome position: 40.37

GC content: 34.88

Gene sequence:

>1032_bases
ATGTTCTCAATTTCTGGAAATGTGTACCAATCCTGTTTTACAAAGCACAAATCTATGAAAATAATTTCACGCCGCTTTGT
TGTCTTATTCTTATTAGGAATTTTGATATTTACTGCTATTTGGGTTAGTAGTAAAAGCTTTACCTATGAAGCGACAAACT
CAATATCTCCACAACAAAACGCAAAATGTCGAGTGGTGCAACACGTCCAAGGAGAAACTTGTATTCCCCTCAAACCCCAA
CGAATTGTCACCTTAGATTTTAATAGTTTTGCTGCACTTTTAGCCTTAGATACCAAACCCATCGCCACTTGGATTACAAC
TGAAATAGAAGATGACTTTCCTTACTTTCAAGGAAAAGCAGAGGGAGTAGAAATATTACGTAGTTCAAGCGGTCAAATTA
ATTTAGAAAAACTTGTATTACTTAATCCCGATTTAATTATTGTGATTTCCCATCCAGGATTTGCAGGAATTTATAAATAT
GCTTCACAAATTGCACCTACAGTAGTTCTACCTTGGATAGAAACTAGAGGAAACTGGAAACAACACATTCAAGATACTGC
CAGAATTTTAAACAGAAGAGAAACAAGTATTCAACAGATAAATTACTATAACCAACGTGTTAATCAAGTAAAACAGAGAC
TTAGTAATAATCATCGAAAAATTCACGTATCATTTGCTTTTGTCGCTGCGGGACAATTAGTTATTACTCGTCAAAAATCT
TTTGCGGGTGGAATTTTGCATGATATTGGCATATTAAACCCTATATTTGCCGAATCTGGTGATTACGATTTACCTCTTTC
GGAAGAACTCTTACCCAACATTGATAGCGATATCCTGTTTATTGCACCGCTACGCAAAGATGATTACTCTGTTATCAAAA
AACTTCAGCAAAAGCCTTTATGGTCTAAACTCAAAGCTGTACAGCAAAATCAAGTTTACATAGTAGATTTTTCTGTTTGG
CGGGGATTGAATATGCTTGCAGCTTATGCAATGCTCGATGATCTTGATAAATACATATTTAATATCACTTAA

Upstream 100 bases:

>100_bases
AGGAACTATTTCTTGGACATTTTGATAATCCCATGATTTTCTAACTCACACTGGAGGATAAAAGCTGACAGGATTTATTT
AGACATCTTCAGAAACAAGA

Downstream 100 bases:

>100_bases
AATCATGCCAAAATATAACCTATTTGTCTGTAAATCTTGTCACCCTTCTTCTCAAGAAAGACCAGAAAATCCTCCTTTTG
ATGGTGAAATTTTACTTGAA

Product: iron(III) dicitrate-binding periplasmic protein of ABC transporter

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MFSISGNVYQSCFTKHKSMKIISRRFVVLFLLGILIFTAIWVSSKSFTYEATNSISPQQNAKCRVVQHVQGETCIPLKPQ
RIVTLDFNSFAALLALDTKPIATWITTEIEDDFPYFQGKAEGVEILRSSSGQINLEKLVLLNPDLIIVISHPGFAGIYKY
ASQIAPTVVLPWIETRGNWKQHIQDTARILNRRETSIQQINYYNQRVNQVKQRLSNNHRKIHVSFAFVAAGQLVITRQKS
FAGGILHDIGILNPIFAESGDYDLPLSEELLPNIDSDILFIAPLRKDDYSVIKKLQQKPLWSKLKAVQQNQVYIVDFSVW
RGLNMLAAYAMLDDLDKYIFNIT

Sequences:

>Translated_343_residues
MFSISGNVYQSCFTKHKSMKIISRRFVVLFLLGILIFTAIWVSSKSFTYEATNSISPQQNAKCRVVQHVQGETCIPLKPQ
RIVTLDFNSFAALLALDTKPIATWITTEIEDDFPYFQGKAEGVEILRSSSGQINLEKLVLLNPDLIIVISHPGFAGIYKY
ASQIAPTVVLPWIETRGNWKQHIQDTARILNRRETSIQQINYYNQRVNQVKQRLSNNHRKIHVSFAFVAAGQLVITRQKS
FAGGILHDIGILNPIFAESGDYDLPLSEELLPNIDSDILFIAPLRKDDYSVIKKLQQKPLWSKLKAVQQNQVYIVDFSVW
RGLNMLAAYAMLDDLDKYIFNIT
>Mature_343_residues
MFSISGNVYQSCFTKHKSMKIISRRFVVLFLLGILIFTAIWVSSKSFTYEATNSISPQQNAKCRVVQHVQGETCIPLKPQ
RIVTLDFNSFAALLALDTKPIATWITTEIEDDFPYFQGKAEGVEILRSSSGQINLEKLVLLNPDLIIVISHPGFAGIYKY
ASQIAPTVVLPWIETRGNWKQHIQDTARILNRRETSIQQINYYNQRVNQVKQRLSNNHRKIHVSFAFVAAGQLVITRQKS
FAGGILHDIGILNPIFAESGDYDLPLSEELLPNIDSDILFIAPLRKDDYSVIKKLQQKPLWSKLKAVQQNQVYIVDFSVW
RGLNMLAAYAMLDDLDKYIFNIT

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082411, Length=271, Percent_Identity=27.6752767527675, Blast_Score=82, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 39054; Mature: 39054

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSISGNVYQSCFTKHKSMKIISRRFVVLFLLGILIFTAIWVSSKSFTYEATNSISPQQN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
AKCRVVQHVQGETCIPLKPQRIVTLDFNSFAALLALDTKPIATWITTEIEDDFPYFQGKA
CCEEEEEECCCCEECCCCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCH
EGVEILRSSSGQINLEKLVLLNPDLIIVISHPGFAGIYKYASQIAPTVVLPWIETRGNWK
HHHHHHHCCCCCEEEEEEEEECCCEEEEECCCCHHHHHHHHHHCCCEEEEECHHCCCCHH
QHIQDTARILNRRETSIQQINYYNQRVNQVKQRLSNNHRKIHVSFAFVAAGQLVITRQKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEECCC
FAGGILHDIGILNPIFAESGDYDLPLSEELLPNIDSDILFIAPLRKDDYSVIKKLQQKPL
CCCCHHHHHHCCCHHHCCCCCCCCCCCHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCH
WSKLKAVQQNQVYIVDFSVWRGLNMLAAYAMLDDLDKYIFNIT
HHHHHHHHCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MFSISGNVYQSCFTKHKSMKIISRRFVVLFLLGILIFTAIWVSSKSFTYEATNSISPQQN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
AKCRVVQHVQGETCIPLKPQRIVTLDFNSFAALLALDTKPIATWITTEIEDDFPYFQGKA
CCEEEEEECCCCEECCCCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCH
EGVEILRSSSGQINLEKLVLLNPDLIIVISHPGFAGIYKYASQIAPTVVLPWIETRGNWK
HHHHHHHCCCCCEEEEEEEEECCCEEEEECCCCHHHHHHHHHHCCCEEEEECHHCCCCHH
QHIQDTARILNRRETSIQQINYYNQRVNQVKQRLSNNHRKIHVSFAFVAAGQLVITRQKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEECCC
FAGGILHDIGILNPIFAESGDYDLPLSEELLPNIDSDILFIAPLRKDDYSVIKKLQQKPL
CCCCHHHHHHCCCHHHCCCCCCCCCCCHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCH
WSKLKAVQQNQVYIVDFSVWRGLNMLAAYAMLDDLDKYIFNIT
HHHHHHHHCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]