| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17229619
Identifier: 17229619
GI number: 17229619
Start: 2550954
End: 2552312
Strand: Reverse
Name: 17229619
Synonym: all2127
Alternate gene names: NA
Gene position: 2552312-2550954 (Counterclockwise)
Preceding gene: 17229620
Following gene: 17229618
Centisome position: 39.79
GC content: 37.09
Gene sequence:
>1359_bases ATGAAACTTTCACATTATCATGTAGTTACACAACCATTTTTTGATGAACTTGAACAACAAACAAAGCGGGTTATTTTTTC TAGCCGAACATCGGATGTCAGAATTATTGATGAGCATAGTTGGCACATTTTAGCCAGTGGTGATTTTGACCAATTACCTC AAGATATTTTGTTTGATCTCGTTGATATTGAATTAATTGTACCTGAAGAAGAAAACGAATTACAGACTATTTTAGATTAT AATAATGCTTTGGCAATTGATGACGATAATTTATATTTAGTCATTCAACCGACAGCTTTTTGTCAACTAGGTTGTCATTA CTGCGGTCAAGAACATACTAGCAAAATGATGACTGAAGATGAGCAGCAAAAATTTATAGAACGGGCTGCTAAAAAACTCG CAAGCAAGAACTTTCGTAGTCTCTCAATTAGTTGGTTTGGTGCAGAACCTTTGGTAGGGTTGCCAGTGATGAGAACTCTC ACGCCAAAACTACAGTCTCTTGCAGCCAGTTTTGGTTGTAGTTATCATGCAAAAATTGTCACCAACGGTTTAGCTCTAAC ACATCAAGTAGCAACAGAAATTGTTCAAGAATTAGGCGTAAATTCTATTGAAATTACTCTTGATGGTGTAGGTGAATATC ATGATGCTCGACGGATGCAGAAAAATGGCTTACCTACTTTTGATAAAATTTTTGCTAATGTTACAGCCCTAGCTCATCGA CAAGATTTGGATGTGCAAATTAATATTCGTTGTAATGTTGACTATCAAAATTATGAATCTGTCTCTTTGTTACTACAAAA GTTAGCTGAGGTAGAGATACAAGACAAGATTAGTTTTTATGTAGCACCAATTCATTCTTGGGGCAATGATGCTCATACTC GTTCCCTATCTAAAGAAGAATTTGCTAATTGGGAAATAACTTGGTTTGGGGAAATGGTTGAGTTAGGTTTCAATGTTGGG TTATTACCAGAGCGCAAACCTCTAGTTTGTATGGCTGTAATGCCCCATTCGGAATTAGTTGATGCCTATGGCAATATTTT TAATTGTACAGAAGTATCTTATGTCCCTACATACGGCACACCTAATGAATATGCCATTGATCATTTATCAGGTAAACAGA TGCCTGGTAACAGGGAACGTTTAGCTAGTTTTAATGATAAAGTGCGTCAAGGTTCATACCCCTGTTCTACTTGCCCTATG TTACCTGTTTGCGGTGGTTCTTGTCCAAAGAGTTGGTTAGAAGGTATTGAACCATGCCCCAGTGCTAAACATAACATTGA GCAACGTTTATTACTTACCTATGCGTTATCTCGGATTGAAGAAGCAGAAGCTAACCAGGAGGCTTTAGTTTATGCTTGA
Upstream 100 bases:
>100_bases TTATTACCTATTATCCATCACCTATTACCAATCCTTCAATTGATAACTAGCAACTTATTTTACTATTTTTTCTTGTCTAT TTTACAGGGAGATTATAAAT
Downstream 100 bases:
>100_bases TACTTCCAGTCAACTCCTAACACAAATCACAGAAAGTTATCGCCAGGGGTGTACTGCAACTATGGATTTACCCACAGGTA GTGGTGATTTATTTAGCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Radical SAM Domain Protein; Arylsulfatase Regulator; Transcriptional Regulator; Radical SAM Family Protein; Arylsulfatase Regulator Fe-S Oxidoreductase; AstB/ChuR-Related Protein; Radical Sam Domain Protein; Heme Biosynthesis Related Protein; Arylsulfatase Regulatory Protein; Arylsulfatase-Activating AtsB; Radical SAM
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MKLSHYHVVTQPFFDELEQQTKRVIFSSRTSDVRIIDEHSWHILASGDFDQLPQDILFDLVDIELIVPEEENELQTILDY NNALAIDDDNLYLVIQPTAFCQLGCHYCGQEHTSKMMTEDEQQKFIERAAKKLASKNFRSLSISWFGAEPLVGLPVMRTL TPKLQSLAASFGCSYHAKIVTNGLALTHQVATEIVQELGVNSIEITLDGVGEYHDARRMQKNGLPTFDKIFANVTALAHR QDLDVQINIRCNVDYQNYESVSLLLQKLAEVEIQDKISFYVAPIHSWGNDAHTRSLSKEEFANWEITWFGEMVELGFNVG LLPERKPLVCMAVMPHSELVDAYGNIFNCTEVSYVPTYGTPNEYAIDHLSGKQMPGNRERLASFNDKVRQGSYPCSTCPM LPVCGGSCPKSWLEGIEPCPSAKHNIEQRLLLTYALSRIEEAEANQEALVYA
Sequences:
>Translated_452_residues MKLSHYHVVTQPFFDELEQQTKRVIFSSRTSDVRIIDEHSWHILASGDFDQLPQDILFDLVDIELIVPEEENELQTILDY NNALAIDDDNLYLVIQPTAFCQLGCHYCGQEHTSKMMTEDEQQKFIERAAKKLASKNFRSLSISWFGAEPLVGLPVMRTL TPKLQSLAASFGCSYHAKIVTNGLALTHQVATEIVQELGVNSIEITLDGVGEYHDARRMQKNGLPTFDKIFANVTALAHR QDLDVQINIRCNVDYQNYESVSLLLQKLAEVEIQDKISFYVAPIHSWGNDAHTRSLSKEEFANWEITWFGEMVELGFNVG LLPERKPLVCMAVMPHSELVDAYGNIFNCTEVSYVPTYGTPNEYAIDHLSGKQMPGNRERLASFNDKVRQGSYPCSTCPM LPVCGGSCPKSWLEGIEPCPSAKHNIEQRLLLTYALSRIEEAEANQEALVYA >Mature_452_residues MKLSHYHVVTQPFFDELEQQTKRVIFSSRTSDVRIIDEHSWHILASGDFDQLPQDILFDLVDIELIVPEEENELQTILDY NNALAIDDDNLYLVIQPTAFCQLGCHYCGQEHTSKMMTEDEQQKFIERAAKKLASKNFRSLSISWFGAEPLVGLPVMRTL TPKLQSLAASFGCSYHAKIVTNGLALTHQVATEIVQELGVNSIEITLDGVGEYHDARRMQKNGLPTFDKIFANVTALAHR QDLDVQINIRCNVDYQNYESVSLLLQKLAEVEIQDKISFYVAPIHSWGNDAHTRSLSKEEFANWEITWFGEMVELGFNVG LLPERKPLVCMAVMPHSELVDAYGNIFNCTEVSYVPTYGTPNEYAIDHLSGKQMPGNRERLASFNDKVRQGSYPCSTCPM LPVCGGSCPKSWLEGIEPCPSAKHNIEQRLLLTYALSRIEEAEANQEALVYA
Specific function: Unknown
COG id: COG0641
COG function: function code R; Arylsulfatase regulator (Fe-S oxidoreductase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51044; Mature: 51044
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSHYHVVTQPFFDELEQQTKRVIFSSRTSDVRIIDEHSWHILASGDFDQLPQDILFDL CCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCHHHCCHHHHHHH VDIELIVPEEENELQTILDYNNALAIDDDNLYLVIQPTAFCQLGCHYCGQEHTSKMMTED HEEEEEECCCCCHHHHHHCCCCEEEEECCCEEEEECCHHHHHHHHHHCCHHHHHHHCCCH EQQKFIERAAKKLASKNFRSLSISWFGAEPLVGLPVMRTLTPKLQSLAASFGCSYHAKIV HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEHHH TNGLALTHQVATEIVQELGVNSIEITLDGVGEYHDARRMQKNGLPTFDKIFANVTALAHR HCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHC QDLDVQINIRCNVDYQNYESVSLLLQKLAEVEIQDKISFYVAPIHSWGNDAHTRSLSKEE CCCCEEEEEEEECCCCCHHHHHHHHHHHHHCHHHCCEEEEEEEECCCCCCHHHHCCCHHH FANWEITWFGEMVELGFNVGLLPERKPLVCMAVMPHSELVDAYGNIFNCTEVSYVPTYGT HCCEEEEEEHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHCCEECCCEEEEECCCCC PNEYAIDHLSGKQMPGNRERLASFNDKVRQGSYPCSTCPMLPVCGGSCPKSWLEGIEPCP CCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCC SAKHNIEQRLLLTYALSRIEEAEANQEALVYA CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC >Mature Secondary Structure MKLSHYHVVTQPFFDELEQQTKRVIFSSRTSDVRIIDEHSWHILASGDFDQLPQDILFDL CCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCHHHCCHHHHHHH VDIELIVPEEENELQTILDYNNALAIDDDNLYLVIQPTAFCQLGCHYCGQEHTSKMMTED HEEEEEECCCCCHHHHHHCCCCEEEEECCCEEEEECCHHHHHHHHHHCCHHHHHHHCCCH EQQKFIERAAKKLASKNFRSLSISWFGAEPLVGLPVMRTLTPKLQSLAASFGCSYHAKIV HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEHHH TNGLALTHQVATEIVQELGVNSIEITLDGVGEYHDARRMQKNGLPTFDKIFANVTALAHR HCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHC QDLDVQINIRCNVDYQNYESVSLLLQKLAEVEIQDKISFYVAPIHSWGNDAHTRSLSKEE CCCCEEEEEEEECCCCCHHHHHHHHHHHHHCHHHCCEEEEEEEECCCCCCHHHHCCCHHH FANWEITWFGEMVELGFNVGLLPERKPLVCMAVMPHSELVDAYGNIFNCTEVSYVPTYGT HCCEEEEEEHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHCCEECCCEEEEECCCCC PNEYAIDHLSGKQMPGNRERLASFNDKVRQGSYPCSTCPMLPVCGGSCPKSWLEGIEPCP CCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCC SAKHNIEQRLLLTYALSRIEEAEANQEALVYA CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA