| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229618
Identifier: 17229618
GI number: 17229618
Start: 2549963
End: 2550892
Strand: Reverse
Name: 17229618
Synonym: all2126
Alternate gene names: NA
Gene position: 2550892-2549963 (Counterclockwise)
Preceding gene: 17229619
Following gene: 17229616
Centisome position: 39.77
GC content: 42.69
Gene sequence:
>930_bases ATGGATTTACCCACAGGTAGTGGTGATTTATTTAGCGAAAAACTAGAAGCTTTGATGGCGAAACGTTTACCATTACAAGA ACAATTATTACTGCGTCGCTATAGTAATGCTCGTAGTCAAGGGATGGTAGCGGCTCGCCACCGCCAACTAACAACAGCCG CGCAGTTATTTGAGGAAGCGCGTAAGCCTTTGCAAATGGCTACACTGTCGCGGGAGTCCAAGCTATTACATCAGTCATTT TTAGAGCAATCAGCAGCCTATCTCGATTATTGTCATCAGGATTTTGACCAAGTTTACAGTCGCACTGAAGAGGCTTTAAG ATTAAGTGCGGTTTTAGAGGAAGAATATGGTTATGATATTCTCCTGATGCAGCGTATCCAACTGTTACATAATTTGGTGC GGACAGAAGCACGACAATTAAATTTTACAGGAGCGATCGCACTTGCTGCTCAACTTCTTGCCTATCTTGATGGACAATTG CAGACTTTACCTACTCCCCATCCTTGGGGTTTTGAACGCATAGCACGCCAGCCGCCTGAGTTTGTCTCTGCTATGTTTGC CCAAATTACCAGTGAAGTTGCCCTAATTTTGGCAGATAAAGACCGCAATCAAGCAGCTAATTTGTTAACAATTGCGGCAG ATTATTTACAGTTACCAGTTCACTCTGACAAATCTCGCTACTCACGTTCCTATGCTTGGTTTTCCATCAAACACGCGTTT GTGGAGCAAGATATCACTACTTTTCTCACACAAGCTGCTCAGTTTCTTGCTCAGGGACGTGCTGATACACCTCTGCTTTG GTACACAATAATTCATGATTTGTTGGCTTTATGCAATGAGCAAGGTTGGTTAGATTTTCGTCAGGAAATTGTCCAAGATT CACTGTCTTGGAATGATTTGCCACACAAACTTATTTTAATGAGAAGTTGA
Upstream 100 bases:
>100_bases GAAGCAGAAGCTAACCAGGAGGCTTTAGTTTATGCTTGATACTTCCAGTCAACTCCTAACACAAATCACAGAAAGTTATC GCCAGGGGTGTACTGCAACT
Downstream 100 bases:
>100_bases CAGTTAACAGTCAACTGTCAACACAAAAATATGTGCAAATTAAAGCAAGGACAGATCATCTTAGTAGGGACGTACTTTTG TACGTCCCTATAGCCATATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MDLPTGSGDLFSEKLEALMAKRLPLQEQLLLRRYSNARSQGMVAARHRQLTTAAQLFEEARKPLQMATLSRESKLLHQSF LEQSAAYLDYCHQDFDQVYSRTEEALRLSAVLEEEYGYDILLMQRIQLLHNLVRTEARQLNFTGAIALAAQLLAYLDGQL QTLPTPHPWGFERIARQPPEFVSAMFAQITSEVALILADKDRNQAANLLTIAADYLQLPVHSDKSRYSRSYAWFSIKHAF VEQDITTFLTQAAQFLAQGRADTPLLWYTIIHDLLALCNEQGWLDFRQEIVQDSLSWNDLPHKLILMRS
Sequences:
>Translated_309_residues MDLPTGSGDLFSEKLEALMAKRLPLQEQLLLRRYSNARSQGMVAARHRQLTTAAQLFEEARKPLQMATLSRESKLLHQSF LEQSAAYLDYCHQDFDQVYSRTEEALRLSAVLEEEYGYDILLMQRIQLLHNLVRTEARQLNFTGAIALAAQLLAYLDGQL QTLPTPHPWGFERIARQPPEFVSAMFAQITSEVALILADKDRNQAANLLTIAADYLQLPVHSDKSRYSRSYAWFSIKHAF VEQDITTFLTQAAQFLAQGRADTPLLWYTIIHDLLALCNEQGWLDFRQEIVQDSLSWNDLPHKLILMRS >Mature_309_residues MDLPTGSGDLFSEKLEALMAKRLPLQEQLLLRRYSNARSQGMVAARHRQLTTAAQLFEEARKPLQMATLSRESKLLHQSF LEQSAAYLDYCHQDFDQVYSRTEEALRLSAVLEEEYGYDILLMQRIQLLHNLVRTEARQLNFTGAIALAAQLLAYLDGQL QTLPTPHPWGFERIARQPPEFVSAMFAQITSEVALILADKDRNQAANLLTIAADYLQLPVHSDKSRYSRSYAWFSIKHAF VEQDITTFLTQAAQFLAQGRADTPLLWYTIIHDLLALCNEQGWLDFRQEIVQDSLSWNDLPHKLILMRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35440; Mature: 35440
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLPTGSGDLFSEKLEALMAKRLPLQEQLLLRRYSNARSQGMVAARHRQLTTAAQLFEEA CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHH RKPLQMATLSRESKLLHQSFLEQSAAYLDYCHQDFDQVYSRTEEALRLSAVLEEEYGYDI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LLMQRIQLLHNLVRTEARQLNFTGAIALAAQLLAYLDGQLQTLPTPHPWGFERIARQPPE HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHH FVSAMFAQITSEVALILADKDRNQAANLLTIAADYLQLPVHSDKSRYSRSYAWFSIKHAF HHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH VEQDITTFLTQAAQFLAQGRADTPLLWYTIIHDLLALCNEQGWLDFRQEIVQDSLSWNDL HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCC PHKLILMRS CCCEEEECC >Mature Secondary Structure MDLPTGSGDLFSEKLEALMAKRLPLQEQLLLRRYSNARSQGMVAARHRQLTTAAQLFEEA CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHH RKPLQMATLSRESKLLHQSFLEQSAAYLDYCHQDFDQVYSRTEEALRLSAVLEEEYGYDI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LLMQRIQLLHNLVRTEARQLNFTGAIALAAQLLAYLDGQLQTLPTPHPWGFERIARQPPE HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHH FVSAMFAQITSEVALILADKDRNQAANLLTIAADYLQLPVHSDKSRYSRSYAWFSIKHAF HHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH VEQDITTFLTQAAQFLAQGRADTPLLWYTIIHDLLALCNEQGWLDFRQEIVQDSLSWNDL HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCC PHKLILMRS CCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA