Click here to switch to the map view.

The map label for this gene is bioC [C]

Identifier: 17229577

GI number: 17229577

Start: 2492054

End: 2492971

Strand: Reverse

Name: bioC [C]

Synonym: all2085

Alternate gene names: 17229577

Gene position: 2492971-2492054 (Counterclockwise)

Preceding gene: 17229578

Following gene: 17229576

Centisome position: 38.87

GC content: 43.9

Gene sequence:

>918_bases
ATGACTGTTGCTATAAACAAAGCTCCTGGTATAGCTTCTCGCTTGGTGAATGGCATACTGGCCATTAAGCCTCTAGCCAA
CCTCGCCAAGCACCAAGCTAGGCAAATGATGATTAAACGGGCCCAAAGAATTGGCGTACCTTGGATCAATGAAGTCAAGA
CATTACAAGCCCGTAACTGGACAGAAGATTTTGCTCAAGTACAAAATCCGCAAATCACCTACCCAGATTACTACCTGACT
TCATTTCACGGCTATGATGAGGGGGATTTAAGTTGGCAAGCAGCTTTTGAACTGGAAGTGGCGGCACGTACTGTCCATGC
AGGAATTTGGCAGGATGGGAAAGCCGACGGTGATGCAAAACTGCGCCAAAGTTATCACGACATTCTCAAAGTGCAAGTTC
CTCAACCGCAAGACATTCTCGACTTGGGTTGTAGCGTGGGTTTAAGTACATTTACCCTACAAGAAACTTATCCCCATGCT
CAAGTTACAGGTTTGGATTTGTCTCCTTATTTTTTGGCTGTAGCTAAATATCGCGCCCAACAAAGTCAGGCTCAAATCAA
TTGGATTCATGCTACAGCCGAGTCTACAGGATTGCCAGATAAAGCTTTTGATTTAGTTTCGCTTTTCTTGATTTGTCATG
AATTACCTCAGTTAGCAACCCAAAAGATTTTCGCAGAGATGCGGCGTTTATTGCGTCCTGGTGGTCACATATCTATCATG
GATATGAATCCGCAAGCGGAAGCTTACAAGAAAATGCCGCCCTACATTTTGACATTGCTCAAAAGCACTGAACCATACAT
GGATCAATATTTTGCCTTGGATATTGAGCAGACTTTAGTAGAAGCTGGTTTCCAAACTCCAACAATTACTAAAAATAGCC
CTCGTCATCGCACCGTTATTGCTCAAGTGCGTGACTGA

Upstream 100 bases:

>100_bases
CTGACAGTGATGTCAACTTTTAAGTTTTACCTTGGTTTAGTAGATTTGCATCCCGCAAGTATGTCATAAGTAAAAAAGGC
TGTTCAACGCAAACTGACTT

Downstream 100 bases:

>100_bases
TTTATTCCTATTTCTGTGGGCGGTGATTCCACCATTAGTATTTTTGGGGTACTACTATTATCGTGTACCCCATGCCCCGC
CTTTATCTGTGCTGTTGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: Methyltransferase; Methyltransferase Domain Family; SAM-Dependent Methyltransferase; UbiE/COQ5 Family Methlytransferase; Generic Methyl-Transferase; UbiE/COQ5 Methyltransferase; Methyltransferase UbiE/COQ5 Family Protein; Methyltransferase UbiE/COQ5 Family; Biotin Biosynthesis Protein BioC; Methyltransferase UbiE; Methlytransferase

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MTVAINKAPGIASRLVNGILAIKPLANLAKHQARQMMIKRAQRIGVPWINEVKTLQARNWTEDFAQVQNPQITYPDYYLT
SFHGYDEGDLSWQAAFELEVAARTVHAGIWQDGKADGDAKLRQSYHDILKVQVPQPQDILDLGCSVGLSTFTLQETYPHA
QVTGLDLSPYFLAVAKYRAQQSQAQINWIHATAESTGLPDKAFDLVSLFLICHELPQLATQKIFAEMRRLLRPGGHISIM
DMNPQAEAYKKMPPYILTLLKSTEPYMDQYFALDIEQTLVEAGFQTPTITKNSPRHRTVIAQVRD

Sequences:

>Translated_305_residues
MTVAINKAPGIASRLVNGILAIKPLANLAKHQARQMMIKRAQRIGVPWINEVKTLQARNWTEDFAQVQNPQITYPDYYLT
SFHGYDEGDLSWQAAFELEVAARTVHAGIWQDGKADGDAKLRQSYHDILKVQVPQPQDILDLGCSVGLSTFTLQETYPHA
QVTGLDLSPYFLAVAKYRAQQSQAQINWIHATAESTGLPDKAFDLVSLFLICHELPQLATQKIFAEMRRLLRPGGHISIM
DMNPQAEAYKKMPPYILTLLKSTEPYMDQYFALDIEQTLVEAGFQTPTITKNSPRHRTVIAQVRD
>Mature_304_residues
TVAINKAPGIASRLVNGILAIKPLANLAKHQARQMMIKRAQRIGVPWINEVKTLQARNWTEDFAQVQNPQITYPDYYLTS
FHGYDEGDLSWQAAFELEVAARTVHAGIWQDGKADGDAKLRQSYHDILKVQVPQPQDILDLGCSVGLSTFTLQETYPHAQ
VTGLDLSPYFLAVAKYRAQQSQAQINWIHATAESTGLPDKAFDLVSLFLICHELPQLATQKIFAEMRRLLRPGGHISIMD
MNPQAEAYKKMPPYILTLLKSTEPYMDQYFALDIEQTLVEAGFQTPTITKNSPRHRTVIAQVRD

Specific function: Bioc Is Involved In An Early, But Chemically Unexplored, Step In The Conversion Of Pimelic Acid To Biotin. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34362; Mature: 34231

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVAINKAPGIASRLVNGILAIKPLANLAKHQARQMMIKRAQRIGVPWINEVKTLQARNW
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
TEDFAQVQNPQITYPDYYLTSFHGYDEGDLSWQAAFELEVAARTVHAGIWQDGKADGDAK
HHHHHHCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCHHH
LRQSYHDILKVQVPQPQDILDLGCSVGLSTFTLQETYPHAQVTGLDLSPYFLAVAKYRAQ
HHHHHHHHEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHHHH
QSQAQINWIHATAESTGLPDKAFDLVSLFLICHELPQLATQKIFAEMRRLLRPGGHISIM
HHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
DMNPQAEAYKKMPPYILTLLKSTEPYMDQYFALDIEQTLVEAGFQTPTITKNSPRHRTVI
ECCCHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE
AQVRD
EEECC
>Mature Secondary Structure 
TVAINKAPGIASRLVNGILAIKPLANLAKHQARQMMIKRAQRIGVPWINEVKTLQARNW
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
TEDFAQVQNPQITYPDYYLTSFHGYDEGDLSWQAAFELEVAARTVHAGIWQDGKADGDAK
HHHHHHCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCHHH
LRQSYHDILKVQVPQPQDILDLGCSVGLSTFTLQETYPHAQVTGLDLSPYFLAVAKYRAQ
HHHHHHHHEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHHHH
QSQAQINWIHATAESTGLPDKAFDLVSLFLICHELPQLATQKIFAEMRRLLRPGGHISIM
HHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
DMNPQAEAYKKMPPYILTLLKSTEPYMDQYFALDIEQTLVEAGFQTPTITKNSPRHRTVI
ECCCHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE
AQVRD
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA