| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229576
Identifier: 17229576
GI number: 17229576
Start: 2491093
End: 2492061
Strand: Reverse
Name: 17229576
Synonym: all2084
Alternate gene names: NA
Gene position: 2492061-2491093 (Counterclockwise)
Preceding gene: 17229577
Following gene: 17229572
Centisome position: 38.85
GC content: 42.21
Gene sequence:
>969_bases GTGACTGATTTATTCCTATTTCTGTGGGCGGTGATTCCACCATTAGTATTTTTGGGGTACTACTATTATCGTGTACCCCA TGCCCCGCCTTTATCTGTGCTGTTGTGGTTATTTCTGTTAGGGGCAATATCTGGTTTTCTGGCCTTGGGCTTGGAATATG TGTTTGATTCTGTCGCCAATTGGGTATTAAACTGGCAAAGAATACAGCGATCGCTTTTTGGTATCGCTTTACGTCAACTG ATAGCGATCGGCCCGATTGAGGAGGGTTGCAAGATATTAGCAGTTGTTGTTGCCAACTATTATTTTCAACGTCGTTATCA TCTCACATCTAGTAGCATTTTCCTCTTTACTATCGCGGCAGCATTAGGATTCACCGCAGAAGAAAACTGGATTTATCTTT ATCATGGCACAGCAACCATCCTTGACCGGAGTATTGGCACACCAGTACACGCCATGTTTTCTGCTCCTTGGGGATACGCC TTAGGGAAATATTTTCATGCAACTGAGCGATTAAATCACTACAGAAATTTGTTGGTACGAGCGGGGATTAACTCGGTGAT TTTTCACGCTCTCGTAAATGTACTCTCTAGTGCTTGGCGTTATTCACCACCTCTACGTTTCCTCAGCTATGGTTTCTTTC CATTATTGGTGTGGATGTTTTGGCGTATGGAACAATTACTGCGTCAAGTTACATCCCAACGTCCCCTGAATTTAATATCT GGTCATACTTCCCTCCATCGTTACTGGCAAAGAGGTTTAGTCTTATTTGCCCTCATGCTAGGCGGTAATGCCATTTTTGG GCTGTTTCTTTTAGCTAGAGTTATTAGTCCCTTGAGTCCAGCACAGATTTTTTCACCCGATTTTTTCTGGCTGATTATGA GTCGGTTTTTAACTAATTTAGCTTTCGGAATCCTGGCTTGGTTAATTTATTTATATTTAAGACATGGATCTAGCGATCGC TACTTCTAA
Upstream 100 bases:
>100_bases TTTGCCTTGGATATTGAGCAGACTTTAGTAGAAGCTGGTTTCCAAACTCCAACAATTACTAAAAATAGCCCTCGTCATCG CACCGTTATTGCTCAAGTGC
Downstream 100 bases:
>100_bases TAATATCTGCGGTCATTGGTGATGGTATAGCTGGGAACTGGGGACTGGGTGAAAAGTCCTGTTGTGTCTAGGCTGTATAA TCTATGTGATGTCCTAACAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MTDLFLFLWAVIPPLVFLGYYYYRVPHAPPLSVLLWLFLLGAISGFLALGLEYVFDSVANWVLNWQRIQRSLFGIALRQL IAIGPIEEGCKILAVVVANYYFQRRYHLTSSSIFLFTIAAALGFTAEENWIYLYHGTATILDRSIGTPVHAMFSAPWGYA LGKYFHATERLNHYRNLLVRAGINSVIFHALVNVLSSAWRYSPPLRFLSYGFFPLLVWMFWRMEQLLRQVTSQRPLNLIS GHTSLHRYWQRGLVLFALMLGGNAIFGLFLLARVISPLSPAQIFSPDFFWLIMSRFLTNLAFGILAWLIYLYLRHGSSDR YF
Sequences:
>Translated_322_residues MTDLFLFLWAVIPPLVFLGYYYYRVPHAPPLSVLLWLFLLGAISGFLALGLEYVFDSVANWVLNWQRIQRSLFGIALRQL IAIGPIEEGCKILAVVVANYYFQRRYHLTSSSIFLFTIAAALGFTAEENWIYLYHGTATILDRSIGTPVHAMFSAPWGYA LGKYFHATERLNHYRNLLVRAGINSVIFHALVNVLSSAWRYSPPLRFLSYGFFPLLVWMFWRMEQLLRQVTSQRPLNLIS GHTSLHRYWQRGLVLFALMLGGNAIFGLFLLARVISPLSPAQIFSPDFFWLIMSRFLTNLAFGILAWLIYLYLRHGSSDR YF >Mature_321_residues TDLFLFLWAVIPPLVFLGYYYYRVPHAPPLSVLLWLFLLGAISGFLALGLEYVFDSVANWVLNWQRIQRSLFGIALRQLI AIGPIEEGCKILAVVVANYYFQRRYHLTSSSIFLFTIAAALGFTAEENWIYLYHGTATILDRSIGTPVHAMFSAPWGYAL GKYFHATERLNHYRNLLVRAGINSVIFHALVNVLSSAWRYSPPLRFLSYGFFPLLVWMFWRMEQLLRQVTSQRPLNLISG HTSLHRYWQRGLVLFALMLGGNAIFGLFLLARVISPLSPAQIFSPDFFWLIMSRFLTNLAFGILAWLIYLYLRHGSSDRY F
Specific function: Unknown
COG id: COG2339
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37185; Mature: 37054
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLFLFLWAVIPPLVFLGYYYYRVPHAPPLSVLLWLFLLGAISGFLALGLEYVFDSVAN CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WVLNWQRIQRSLFGIALRQLIAIGPIEEGCKILAVVVANYYFQRRYHLTSSSIFLFTIAA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH ALGFTAEENWIYLYHGTATILDRSIGTPVHAMFSAPWGYALGKYFHATERLNHYRNLLVR HHCCCCCCCEEEEEECHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH AGINSVIFHALVNVLSSAWRYSPPLRFLSYGFFPLLVWMFWRMEQLLRQVTSQRPLNLIS HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH GHTSLHRYWQRGLVLFALMLGGNAIFGLFLLARVISPLSPAQIFSPDFFWLIMSRFLTNL CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHH AFGILAWLIYLYLRHGSSDRYF HHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TDLFLFLWAVIPPLVFLGYYYYRVPHAPPLSVLLWLFLLGAISGFLALGLEYVFDSVAN HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WVLNWQRIQRSLFGIALRQLIAIGPIEEGCKILAVVVANYYFQRRYHLTSSSIFLFTIAA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH ALGFTAEENWIYLYHGTATILDRSIGTPVHAMFSAPWGYALGKYFHATERLNHYRNLLVR HHCCCCCCCEEEEEECHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH AGINSVIFHALVNVLSSAWRYSPPLRFLSYGFFPLLVWMFWRMEQLLRQVTSQRPLNLIS HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH GHTSLHRYWQRGLVLFALMLGGNAIFGLFLLARVISPLSPAQIFSPDFFWLIMSRFLTNL CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHH AFGILAWLIYLYLRHGSSDRYF HHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA