| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229563
Identifier: 17229563
GI number: 17229563
Start: 2477674
End: 2478150
Strand: Direct
Name: 17229563
Synonym: alr2071
Alternate gene names: NA
Gene position: 2477674-2478150 (Clockwise)
Preceding gene: 17229556
Following gene: 17229565
Centisome position: 38.63
GC content: 48.85
Gene sequence:
>477_bases ATGGCTGAAAGTAGTGAAATTGGTCAACACCTAACACAACAGTGGCTAACAGAAATCCAAACACTCAAGCAGCAATTAAT AGAACAGCAACAAGAACGGGATGCTGCTTGGGAAAGTGCTGAAAAGTGGCGCAAACTCTACAACACGGAAGCAGAACAAC GCCGCACAGATACGGATTTCTTTCGCCAAACGATCGCCTCCCTCAAGGCGGAAATTCAACAACTCAAGGGGATTGACGGA CAAACTTTACCCGATGCAGCAGCTAGCGCCGGCGTACAGCAAGAATTAGCACAAATCCGTACCGTAGAGGACTTGAAAGC CAAACTGGTTGATGTGATCAAAGAACGCGATCGCCTACGCCAAGCCTTGAAAACCGAACAAGAGAACCACGCCCAAACCC GCAAAAGCTTAACTACTGCCTTGGGTGATGCAATTGATAGTTTGGCAAAGGAACGAGGACGGGGGAGTGGGGAGTAG
Upstream 100 bases:
>100_bases AGTTATACTTTGTTTGTTTTATTAGTTTCCTAACTAAAACTTCGTATTTAAAGAATAATTGCGTTTATATAGTCCAACAA TAGGAGAAGTAAGTAAATAA
Downstream 100 bases:
>100_bases GGGAGCAGGGGAAGTAATGAGTAATGACAATTGTACAGACGCGATTAATCGCGTCTCTAAACTCCTAAAATCCCATCGCC TTGGCTACAGAGCTTAAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MAESSEIGQHLTQQWLTEIQTLKQQLIEQQQERDAAWESAEKWRKLYNTEAEQRRTDTDFFRQTIASLKAEIQQLKGIDG QTLPDAAASAGVQQELAQIRTVEDLKAKLVDVIKERDRLRQALKTEQENHAQTRKSLTTALGDAIDSLAKERGRGSGE
Sequences:
>Translated_158_residues MAESSEIGQHLTQQWLTEIQTLKQQLIEQQQERDAAWESAEKWRKLYNTEAEQRRTDTDFFRQTIASLKAEIQQLKGIDG QTLPDAAASAGVQQELAQIRTVEDLKAKLVDVIKERDRLRQALKTEQENHAQTRKSLTTALGDAIDSLAKERGRGSGE >Mature_157_residues AESSEIGQHLTQQWLTEIQTLKQQLIEQQQERDAAWESAEKWRKLYNTEAEQRRTDTDFFRQTIASLKAEIQQLKGIDGQ TLPDAAASAGVQQELAQIRTVEDLKAKLVDVIKERDRLRQALKTEQENHAQTRKSLTTALGDAIDSLAKERGRGSGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17930; Mature: 17799
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESSEIGQHLTQQWLTEIQTLKQQLIEQQQERDAAWESAEKWRKLYNTEAEQRRTDTDF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHH FRQTIASLKAEIQQLKGIDGQTLPDAAASAGVQQELAQIRTVEDLKAKLVDVIKERDRLR HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QALKTEQENHAQTRKSLTTALGDAIDSLAKERGRGSGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AESSEIGQHLTQQWLTEIQTLKQQLIEQQQERDAAWESAEKWRKLYNTEAEQRRTDTDF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHH FRQTIASLKAEIQQLKGIDGQTLPDAAASAGVQQELAQIRTVEDLKAKLVDVIKERDRLR HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QALKTEQENHAQTRKSLTTALGDAIDSLAKERGRGSGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA