Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17229485

Identifier: 17229485

GI number: 17229485

Start: 2388039

End: 2388230

Strand: Reverse

Name: 17229485

Synonym: asl1993

Alternate gene names: NA

Gene position: 2388230-2388039 (Counterclockwise)

Preceding gene: 17229486

Following gene: 17229484

Centisome position: 37.24

GC content: 40.62

Gene sequence:

>192_bases
ATGTTTCTACTGATGGTTGGCGTGACATCAATAGAAGTAAAGGAAAGCTTGGATAATTTAGTAGAAAGGTTGCGTCAAGC
GGAAACAGCAAAGGTCAAGGAACGCTTGCAAGTGCTGTACTGGCTCAAACAGGAGAATCCTTTTTTTTGCAGTTTTCTCA
TGTTGATACCCAATGCTATCAACAGTTCTTGA

Upstream 100 bases:

>100_bases
AATTAATTCTAACGGCTGTAGAGATGGCTGAAAGTTTAATTCATACCAATTTAAATTAGAGACAGGGCAGATGAGGTAAA
CTGAAAATCGTTGTTTTTAG

Downstream 100 bases:

>100_bases
ATGAATTTTCTCAAGCATATCCAGATAGTCTCAACATTCTTCAAGTTGATCAAGGCCGCTTTCATACAGGCAAGGAGCTG
ATTGTGCCTGAGAATGTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 63; Mature: 63

Protein sequence:

>63_residues
MFLLMVGVTSIEVKESLDNLVERLRQAETAKVKERLQVLYWLKQENPFFCSFLMLIPNAINSS

Sequences:

>Translated_63_residues
MFLLMVGVTSIEVKESLDNLVERLRQAETAKVKERLQVLYWLKQENPFFCSFLMLIPNAINSS
>Mature_63_residues
MFLLMVGVTSIEVKESLDNLVERLRQAETAKVKERLQVLYWLKQENPFFCSFLMLIPNAINSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7333; Mature: 7333

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLLMVGVTSIEVKESLDNLVERLRQAETAKVKERLQVLYWLKQENPFFCSFLMLIPNAI
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
NSS
CCC
>Mature Secondary Structure
MFLLMVGVTSIEVKESLDNLVERLRQAETAKVKERLQVLYWLKQENPFFCSFLMLIPNAI
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
NSS
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA