| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229484
Identifier: 17229484
GI number: 17229484
Start: 2387722
End: 2387955
Strand: Reverse
Name: 17229484
Synonym: asl1992
Alternate gene names: NA
Gene position: 2387955-2387722 (Counterclockwise)
Preceding gene: 17229485
Following gene: 17229483
Centisome position: 37.23
GC content: 41.88
Gene sequence:
>234_bases GTGCCTGAGAATGTGTTTTTGTTGTTTCAACCACCTTACTGTCCAGAACTCAATCCCATTGAGCGCTTATGGGGATATCT CAAAGCTGACCTCAAATGGGCTTCTTTCCAGACACTTGATCAACTCCAAGCCAAAGTTGATCAACTCTTGGCTGAGTTAA CTCCAGAATTAATTATGTCCATTACCGGGTATTCTTTCATTCTTGATGCCCTATCTGCCCTAAACACCATTTAA
Upstream 100 bases:
>100_bases CTATCAACAGTTCTTGAATGAATTTTCTCAAGCATATCCAGATAGTCTCAACATTCTTCAAGTTGATCAAGGCCGCTTTC ATACAGGCAAGGAGCTGATT
Downstream 100 bases:
>100_bases TTTGGTATGACATGGCGACAGTCCAACATTTTCAACGTCTTCAAACGCCCCAGTATTGCCTTGTTGGCAAAATCCTATTA GTTATAGTCAGGCGATCGCT
Product: transposase
Products: NA
Alternate protein names: Transposase Family Protein; Transposase OrfB
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MPENVFLLFQPPYCPELNPIERLWGYLKADLKWASFQTLDQLQAKVDQLLAELTPELIMSITGYSFILDALSALNTI
Sequences:
>Translated_77_residues MPENVFLLFQPPYCPELNPIERLWGYLKADLKWASFQTLDQLQAKVDQLLAELTPELIMSITGYSFILDALSALNTI >Mature_76_residues PENVFLLFQPPYCPELNPIERLWGYLKADLKWASFQTLDQLQAKVDQLLAELTPELIMSITGYSFILDALSALNTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8801; Mature: 8670
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPENVFLLFQPPYCPELNPIERLWGYLKADLKWASFQTLDQLQAKVDQLLAELTPELIMS CCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITGYSFILDALSALNTI HHHHHHHHHHHHHHCCC >Mature Secondary Structure PENVFLLFQPPYCPELNPIERLWGYLKADLKWASFQTLDQLQAKVDQLLAELTPELIMS CCCCEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITGYSFILDALSALNTI HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA