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The map label for this gene is amiC [H]

Identifier: 17229443

GI number: 17229443

Start: 2333777

End: 2335093

Strand: Reverse

Name: amiC [H]

Synonym: all1951

Alternate gene names: 17229443

Gene position: 2335093-2333777 (Counterclockwise)

Preceding gene: 17229450

Following gene: 17229442

Centisome position: 36.41

GC content: 40.17

Gene sequence:

>1317_bases
ATGAGTAGACGAATTAACCGACGCAGATTTTTAATTTACGGCTCTGCAACTATTGGTAGCAGCATTTTGCTGAAGGCTTG
CGCTAATAGCACCCCAAACGCTACAAACAGTCCAGCCACCTCTGGGAATGCTTCTCCTGTGGCTGCTAGTGGTGGTAACA
CGATCAAAATAGGTATTCTGCACTCCCTTAGTGGCACAATGTCTATCAGTGAAAAAAGCGTTGTGGATGCTGAGAAATTA
GCTATCAAAGAAATTAACGCGGCTGGTGGTGTTTTAGGTAAACAAATTGAAGCCATTGTTGAAGATGGTGCTTCTAACTG
GGATACTTTTAGAGAAAAAGCCACCAAGTTGATTGATCAAGATAAAGTAGCTGTAGTTTTTGGTTGTTGGACTTCAGCTA
GCCGCAAAAATGTTAAGCCAGTCTTTGAAAGTAAAGACCATATGCTGTGGTATCCCGTGCAGTATGAAGGTCAAGAGTGT
TCTAAAAACATTTTTTACACAGGTGCAGCGCCAAATCAACAAATTGAACCTTCTGTTGATTGGTTGTTAAAAAATAAGGG
CAAAGAATTCTTTTTAGTAGGCTCAGATTACGTTTTCCCTCGGACTGCTAACACTATTATCAAAGCCCAATTAGAAGCTT
TAGGTGGAAAAACAGTTGGTGAAGATTATTTACCATTAGGTAACACGGAAGTTACACCAATTATCAGCAAAATTAAGCAA
GCTTTACCTAACGGCGGGGTAATTTATAACACCTTGAACGGTGATAGTAATGTAGCTTTCTTCAAACAGTTAAAAGGTGC
TGGATTAACACCAGATAAACATCCTTCTATGTCGGTAAGTATTGCGGAAGAAGAAGTTAAAGCAATTGGGGTTGAGTATT
TAAAAGGCCACTACGCTGCTTGGAATTATTTCCAAACAGTAGATACCCCTGCTAATAAGAAATTTGTCGAAGCTTTTAAA
AAAGAATATGGTGCAGACCGGGTGACAAATGACCCGATGGAAGCTGCATATATCGCTGTGTATTTGTGGAAGCAATCAGT
AGAAAAAGCAGGTAGTCCTGATTTAGCAAAAGTGCGGGCGGCGGCTTATGGTCAAACCATAGATGCACCTGAAGGTAAAG
TGACAGTCAATACTAATCACCACATATCTAAAATTGTGCGGATTGGTGAAGTTAGAGATGATGGTTTGTTTGATATTATC
TATGCTACACCTGCACCAGTTGAACCAGTTCCTTGGAATCAATTTGTGAAAGAAACTAAGGGATTTGCTTGTGATTGGTC
AGACCCAGGGAAGGGCGAAAAATATAAAAAGGCCTAA

Upstream 100 bases:

>100_bases
ATTCAATGGTTAAATATCAAACTAATATCACAATCTAAAGCTTGACCTTGTGAACTCTCAGGGAGCTAGCTGATTCATCA
AGGGGAAATTTAACCAAGAT

Downstream 100 bases:

>100_bases
TTCAAAATAATTCGTAATTCGTAATTAATTATGAATTACGAATTACGATGATAGCTTTTGGTGAAAAATAATGTTAACAG
GTTTTTTAGATGCTGTATTT

Product: substrate-binding protein of ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MSRRINRRRFLIYGSATIGSSILLKACANSTPNATNSPATSGNASPVAASGGNTIKIGILHSLSGTMSISEKSVVDAEKL
AIKEINAAGGVLGKQIEAIVEDGASNWDTFREKATKLIDQDKVAVVFGCWTSASRKNVKPVFESKDHMLWYPVQYEGQEC
SKNIFYTGAAPNQQIEPSVDWLLKNKGKEFFLVGSDYVFPRTANTIIKAQLEALGGKTVGEDYLPLGNTEVTPIISKIKQ
ALPNGGVIYNTLNGDSNVAFFKQLKGAGLTPDKHPSMSVSIAEEEVKAIGVEYLKGHYAAWNYFQTVDTPANKKFVEAFK
KEYGADRVTNDPMEAAYIAVYLWKQSVEKAGSPDLAKVRAAAYGQTIDAPEGKVTVNTNHHISKIVRIGEVRDDGLFDII
YATPAPVEPVPWNQFVKETKGFACDWSDPGKGEKYKKA

Sequences:

>Translated_438_residues
MSRRINRRRFLIYGSATIGSSILLKACANSTPNATNSPATSGNASPVAASGGNTIKIGILHSLSGTMSISEKSVVDAEKL
AIKEINAAGGVLGKQIEAIVEDGASNWDTFREKATKLIDQDKVAVVFGCWTSASRKNVKPVFESKDHMLWYPVQYEGQEC
SKNIFYTGAAPNQQIEPSVDWLLKNKGKEFFLVGSDYVFPRTANTIIKAQLEALGGKTVGEDYLPLGNTEVTPIISKIKQ
ALPNGGVIYNTLNGDSNVAFFKQLKGAGLTPDKHPSMSVSIAEEEVKAIGVEYLKGHYAAWNYFQTVDTPANKKFVEAFK
KEYGADRVTNDPMEAAYIAVYLWKQSVEKAGSPDLAKVRAAAYGQTIDAPEGKVTVNTNHHISKIVRIGEVRDDGLFDII
YATPAPVEPVPWNQFVKETKGFACDWSDPGKGEKYKKA
>Mature_437_residues
SRRINRRRFLIYGSATIGSSILLKACANSTPNATNSPATSGNASPVAASGGNTIKIGILHSLSGTMSISEKSVVDAEKLA
IKEINAAGGVLGKQIEAIVEDGASNWDTFREKATKLIDQDKVAVVFGCWTSASRKNVKPVFESKDHMLWYPVQYEGQECS
KNIFYTGAAPNQQIEPSVDWLLKNKGKEFFLVGSDYVFPRTANTIIKAQLEALGGKTVGEDYLPLGNTEVTPIISKIKQA
LPNGGVIYNTLNGDSNVAFFKQLKGAGLTPDKHPSMSVSIAEEEVKAIGVEYLKGHYAAWNYFQTVDTPANKKFVEAFKK
EYGADRVTNDPMEAAYIAVYLWKQSVEKAGSPDLAKVRAAAYGQTIDAPEGKVTVNTNHHISKIVRIGEVRDDGLFDIIY
ATPAPVEPVPWNQFVKETKGFACDWSDPGKGEKYKKA

Specific function: Negatively regulates the expression of the aliphatic amidase operon. AmiC functions by inhibiting the action of AmiR at the protein level. It exhibits protein kinase activity [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000709 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47683; Mature: 47552

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRINRRRFLIYGSATIGSSILLKACANSTPNATNSPATSGNASPVAASGGNTIKIGIL
CCCCCCCEEEEEEECCHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEE
HSLSGTMSISEKSVVDAEKLAIKEINAAGGVLGKQIEAIVEDGASNWDTFREKATKLIDQ
ECCCCCEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
DKVAVVFGCWTSASRKNVKPVFESKDHMLWYPVQYEGQECSKNIFYTGAAPNQQIEPSVD
CCEEEEEEECCCCCCCCCCHHHCCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCCHH
WLLKNKGKEFFLVGSDYVFPRTANTIIKAQLEALGGKTVGEDYLPLGNTEVTPIISKIKQ
HHHHCCCCEEEEECCCEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
ALPNGGVIYNTLNGDSNVAFFKQLKGAGLTPDKHPSMSVSIAEEEVKAIGVEYLKGHYAA
HCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCHHH
WNYFQTVDTPANKKFVEAFKKEYGADRVTNDPMEAAYIAVYLWKQSVEKAGSPDLAKVRA
HHEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
AAYGQTIDAPEGKVTVNTNHHISKIVRIGEVRDDGLFDIIYATPAPVEPVPWNQFVKETK
HHCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHC
GFACDWSDPGKGEKYKKA
CCEECCCCCCCCCCCCCC
>Mature Secondary Structure 
SRRINRRRFLIYGSATIGSSILLKACANSTPNATNSPATSGNASPVAASGGNTIKIGIL
CCCCCCEEEEEEECCHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEE
HSLSGTMSISEKSVVDAEKLAIKEINAAGGVLGKQIEAIVEDGASNWDTFREKATKLIDQ
ECCCCCEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
DKVAVVFGCWTSASRKNVKPVFESKDHMLWYPVQYEGQECSKNIFYTGAAPNQQIEPSVD
CCEEEEEEECCCCCCCCCCHHHCCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCCHH
WLLKNKGKEFFLVGSDYVFPRTANTIIKAQLEALGGKTVGEDYLPLGNTEVTPIISKIKQ
HHHHCCCCEEEEECCCEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
ALPNGGVIYNTLNGDSNVAFFKQLKGAGLTPDKHPSMSVSIAEEEVKAIGVEYLKGHYAA
HCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCHHH
WNYFQTVDTPANKKFVEAFKKEYGADRVTNDPMEAAYIAVYLWKQSVEKAGSPDLAKVRA
HHEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
AAYGQTIDAPEGKVTVNTNHHISKIVRIGEVRDDGLFDIIYATPAPVEPVPWNQFVKETK
HHCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHC
GFACDWSDPGKGEKYKKA
CCEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1907262; 10984043; 1762155; 7813419; 10508151; 10708652 [H]