| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229450
Identifier: 17229450
GI number: 17229450
Start: 2340203
End: 2341294
Strand: Reverse
Name: 17229450
Synonym: all1958
Alternate gene names: NA
Gene position: 2341294-2340203 (Counterclockwise)
Preceding gene: 17229454
Following gene: 17229443
Centisome position: 36.5
GC content: 32.05
Gene sequence:
>1092_bases ATGAACACACGCAAGAGTGAAGTTTGTTTATTATACTCTGAATCAAATCAAGCTACAGCAAATCTTTTGAAAGATGCTTT AAATTACTACAGTATTGATATTTGGGAAGCACAAAATATATCTATAGGCAGCCAAATCATAAGTGAAACAACAAAGGCTT TAGAAAAGAATAAGTTCGTTATTGTTTTATGGTCTAATACATCTGTCAAATCAGCTTTGTTGACAAATTTAGCGGCGGAA GCCAAGAAAAATGGCAAGGTATTGATTTCTGTTTTGATAGAACCAGTAAAAATCCCTGGAGAATTTTTAGATATTCAATC TGCTAATCTTATAGGCTGGGATGGAGATAGGGAGAATGAGCAAATTGTTAAACTTTGGCGGCTCATTCAAGACCAGGTTT TAAAACATCGCCGTAAAAAGATAGCATTTAATAAATTTAATGCTATAGTTACCCTGTTATTAACTATTACTGGGCTAATA ATTGCTGTTGCAACACCAGAAGTGAGATGTTTTTTAAAAATACAATGTTCCGAAAACTCATTTAGTAAAAGTAGTCAAAA TTTACCTGATATAAATTCATCAAGTTCTGTATTAAAAAATCCTGAATCTCCTCTAAAATCTGATGATTCTTTATTAAAAT CCTCTTCCAATCCCATATCAAATAAACAGCCTGAGTTAAACACCGCATCACCAATAGAAAATTTTACAACTATTGAAAGA GATGGGTTAGAATTTACTTTACAGAAGTGTGCAAGAAAAAATCAGAATATCAAATGCGAGTTGCAATTAATCAACACTCT TAATGATGATCAAAGACTGATTATGTATGGTAATTTTGCTGGTCTGAGAAGCAGAATACTAGACTTAGATGGTATTACCT ACTTTGCTGAATCAGTTGAAATTGATGGAAATGTAGAAAAATATGTGAAGACGACTTTAATCCCAAAAGTTAAGAATAAA CTCATTATTAATTTTACTAAAGTGCCTGCACAAGTAAACCAAATTCAAGTTTTGGAAATTGCAGCCGCCTATGGAAGGCC AAATAAAAACATAGAAGACGCTAGATTCCATAATATTGTTATATCCAACTAA
Upstream 100 bases:
>100_bases TAATATTGATTTTCCATTGAAAGACCTCTATAATTTTCTAGTCTGATTATTATACTAATTCGCCATTAAAATAAAATATA TTGAAAAGGACAATCAATGA
Downstream 100 bases:
>100_bases AGTTGTACTGGCAAAGGTTCCCAAACCTCGCCGTACTTTTCTTTTAAAGCGTGCCAAGCTTCTACTTGTCCTGGTTCATA TTCTCCAGGCTTACCCCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MNTRKSEVCLLYSESNQATANLLKDALNYYSIDIWEAQNISIGSQIISETTKALEKNKFVIVLWSNTSVKSALLTNLAAE AKKNGKVLISVLIEPVKIPGEFLDIQSANLIGWDGDRENEQIVKLWRLIQDQVLKHRRKKIAFNKFNAIVTLLLTITGLI IAVATPEVRCFLKIQCSENSFSKSSQNLPDINSSSSVLKNPESPLKSDDSLLKSSSNPISNKQPELNTASPIENFTTIER DGLEFTLQKCARKNQNIKCELQLINTLNDDQRLIMYGNFAGLRSRILDLDGITYFAESVEIDGNVEKYVKTTLIPKVKNK LIINFTKVPAQVNQIQVLEIAAAYGRPNKNIEDARFHNIVISN
Sequences:
>Translated_363_residues MNTRKSEVCLLYSESNQATANLLKDALNYYSIDIWEAQNISIGSQIISETTKALEKNKFVIVLWSNTSVKSALLTNLAAE AKKNGKVLISVLIEPVKIPGEFLDIQSANLIGWDGDRENEQIVKLWRLIQDQVLKHRRKKIAFNKFNAIVTLLLTITGLI IAVATPEVRCFLKIQCSENSFSKSSQNLPDINSSSSVLKNPESPLKSDDSLLKSSSNPISNKQPELNTASPIENFTTIER DGLEFTLQKCARKNQNIKCELQLINTLNDDQRLIMYGNFAGLRSRILDLDGITYFAESVEIDGNVEKYVKTTLIPKVKNK LIINFTKVPAQVNQIQVLEIAAAYGRPNKNIEDARFHNIVISN >Mature_363_residues MNTRKSEVCLLYSESNQATANLLKDALNYYSIDIWEAQNISIGSQIISETTKALEKNKFVIVLWSNTSVKSALLTNLAAE AKKNGKVLISVLIEPVKIPGEFLDIQSANLIGWDGDRENEQIVKLWRLIQDQVLKHRRKKIAFNKFNAIVTLLLTITGLI IAVATPEVRCFLKIQCSENSFSKSSQNLPDINSSSSVLKNPESPLKSDDSLLKSSSNPISNKQPELNTASPIENFTTIER DGLEFTLQKCARKNQNIKCELQLINTLNDDQRLIMYGNFAGLRSRILDLDGITYFAESVEIDGNVEKYVKTTLIPKVKNK LIINFTKVPAQVNQIQVLEIAAAYGRPNKNIEDARFHNIVISN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40697; Mature: 40697
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTRKSEVCLLYSESNQATANLLKDALNYYSIDIWEAQNISIGSQIISETTKALEKNKFV CCCCCCCEEEEEECCCCHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHCCCEE IVLWSNTSVKSALLTNLAAEAKKNGKVLISVLIEPVKIPGEFLDIQSANLIGWDGDRENE EEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHEECCCCCEEECCCCCCHH QIVKLWRLIQDQVLKHRRKKIAFNKFNAIVTLLLTITGLIIAVATPEVRCFLKIQCSENS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEEEEECCCC FSKSSQNLPDINSSSSVLKNPESPLKSDDSLLKSSSNPISNKQPELNTASPIENFTTIER CCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCC DGLEFTLQKCARKNQNIKCELQLINTLNDDQRLIMYGNFAGLRSRILDLDGITYFAESVE CCHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCHHHHHHHHCCCCCEEEECCEE IDGNVEKYVKTTLIPKVKNKLIINFTKVPAQVNQIQVLEIAAAYGRPNKNIEDARFHNIV ECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEHHHHCCCCCCCCCCCEEEEE ISN ECC >Mature Secondary Structure MNTRKSEVCLLYSESNQATANLLKDALNYYSIDIWEAQNISIGSQIISETTKALEKNKFV CCCCCCCEEEEEECCCCHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHCCCEE IVLWSNTSVKSALLTNLAAEAKKNGKVLISVLIEPVKIPGEFLDIQSANLIGWDGDRENE EEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHEECCCCCEEECCCCCCHH QIVKLWRLIQDQVLKHRRKKIAFNKFNAIVTLLLTITGLIIAVATPEVRCFLKIQCSENS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEEEEECCCC FSKSSQNLPDINSSSSVLKNPESPLKSDDSLLKSSSNPISNKQPELNTASPIENFTTIER CCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCC DGLEFTLQKCARKNQNIKCELQLINTLNDDQRLIMYGNFAGLRSRILDLDGITYFAESVE CCHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCHHHHHHHHCCCCCEEEECCEE IDGNVEKYVKTTLIPKVKNKLIINFTKVPAQVNQIQVLEIAAAYGRPNKNIEDARFHNIV ECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEHHHHCCCCCCCCCCCEEEEE ISN ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA