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The map label for this gene is 17229417

Identifier: 17229417

GI number: 17229417

Start: 2307770

End: 2308498

Strand: Direct

Name: 17229417

Synonym: alr1925

Alternate gene names: NA

Gene position: 2307770-2308498 (Clockwise)

Preceding gene: 17229416

Following gene: 17229418

Centisome position: 35.98

GC content: 36.76

Gene sequence:

>729_bases
ATGAGTGATTTAACCAAAGTATTTATTGCACCTGAGGAAATTGTCAATTTTCTCAAAAAAAATATGCAGTTGAAAGAGGT
ATATCAAAAAATCTTATTTCAACGGTTGATTTTGCAGGTGGCTGAGGCTAGGGGAATCACCGTGACAACGGAAGAAATTG
AGGCTGAGGCTAACCGCCAGCGTCGGGAAAAGCGTTTAGAGAAAGCCGCAGATACTATGGCGTGGTTAGCAGATCAGTTG
GCTTCCCCAGAGGATTGGGAAATGGGTATACGCGATCGCTTATTATCTCAAAAGTTAGCTAATTTTTTATTCGCTGATAA
AGTAGAAGCTTTTTTTATTCAAAATCAACTGGAGTTTGAGCAAGTTAGTCTCTATCAAATTATTGTCGATTCGGAAAAAC
TCGCTCAAGAAATTTACTACCAAATTGAAGATGAGGAAATTAGTTTCTATGAGGCTGCATATTTATATGATGTTGATGCT
GTTCGTAGGCAAAGATGCGGTTACGAAGGTAAGGTTTATCGATTTTCTCTCCCTGTAAATGTAGCCACAGTTATCTTTAG
AACATCTCCTAAACAGTTAATAAGTCCCCTACAAACTGAGCAAGGTTATCACCTATTTATGGTAGAGGAATTTATACCTG
CTGAATTAACGGGGGAAAGATATCAAGAAATTCTCAATAATATGTTTAACCAATGGTTGATTACTGAACTAAATAAGATT
CTAAATTAA

Upstream 100 bases:

>100_bases
CTGCTGTATATCTTGCACCACTTGCTTATTGCTAAAATCATCAAGCCAAAAAGCCTTTCATAAGTCCAGTATTCAATATA
GTCACTTTCTAATTACATCA

Downstream 100 bases:

>100_bases
TCTGTAGAAAATCAATTACAAGAATATTGAAAACTATTCTTGGAAGCCAAATATATTTCATTAGAATATAAATAATCAAG
TTTTACATTTTCTGTTGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: PPIC-Type PPIASE Domain Protein; Rotamase

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MSDLTKVFIAPEEIVNFLKKNMQLKEVYQKILFQRLILQVAEARGITVTTEEIEAEANRQRREKRLEKAADTMAWLADQL
ASPEDWEMGIRDRLLSQKLANFLFADKVEAFFIQNQLEFEQVSLYQIIVDSEKLAQEIYYQIEDEEISFYEAAYLYDVDA
VRRQRCGYEGKVYRFSLPVNVATVIFRTSPKQLISPLQTEQGYHLFMVEEFIPAELTGERYQEILNNMFNQWLITELNKI
LN

Sequences:

>Translated_242_residues
MSDLTKVFIAPEEIVNFLKKNMQLKEVYQKILFQRLILQVAEARGITVTTEEIEAEANRQRREKRLEKAADTMAWLADQL
ASPEDWEMGIRDRLLSQKLANFLFADKVEAFFIQNQLEFEQVSLYQIIVDSEKLAQEIYYQIEDEEISFYEAAYLYDVDA
VRRQRCGYEGKVYRFSLPVNVATVIFRTSPKQLISPLQTEQGYHLFMVEEFIPAELTGERYQEILNNMFNQWLITELNKI
LN
>Mature_241_residues
SDLTKVFIAPEEIVNFLKKNMQLKEVYQKILFQRLILQVAEARGITVTTEEIEAEANRQRREKRLEKAADTMAWLADQLA
SPEDWEMGIRDRLLSQKLANFLFADKVEAFFIQNQLEFEQVSLYQIIVDSEKLAQEIYYQIEDEEISFYEAAYLYDVDAV
RRQRCGYEGKVYRFSLPVNVATVIFRTSPKQLISPLQTEQGYHLFMVEEFIPAELTGERYQEILNNMFNQWLITELNKIL
N

Specific function: Unknown

COG id: COG0760

COG function: function code O; Parvulin-like peptidyl-prolyl isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28547; Mature: 28416

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: PS50198 PPIC_PPIASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLTKVFIAPEEIVNFLKKNMQLKEVYQKILFQRLILQVAEARGITVTTEEIEAEANRQ
CCCHHHHEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHH
RREKRLEKAADTMAWLADQLASPEDWEMGIRDRLLSQKLANFLFADKVEAFFIQNQLEFE
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVSLYQIIVDSEKLAQEIYYQIEDEEISFYEAAYLYDVDAVRRQRCGYEGKVYRFSLPVN
HHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCE
VATVIFRTSPKQLISPLQTEQGYHLFMVEEFIPAELTGERYQEILNNMFNQWLITELNKI
EEHHEEECCHHHHHCHHHCCCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LN
CC
>Mature Secondary Structure 
SDLTKVFIAPEEIVNFLKKNMQLKEVYQKILFQRLILQVAEARGITVTTEEIEAEANRQ
CCHHHHEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHH
RREKRLEKAADTMAWLADQLASPEDWEMGIRDRLLSQKLANFLFADKVEAFFIQNQLEFE
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVSLYQIIVDSEKLAQEIYYQIEDEEISFYEAAYLYDVDAVRRQRCGYEGKVYRFSLPVN
HHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCE
VATVIFRTSPKQLISPLQTEQGYHLFMVEEFIPAELTGERYQEILNNMFNQWLITELNKI
EEHHEEECCHHHHHCHHHCCCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LN
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA