| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229402
Identifier: 17229402
GI number: 17229402
Start: 2286783
End: 2287673
Strand: Direct
Name: 17229402
Synonym: alr1910
Alternate gene names: NA
Gene position: 2286783-2287673 (Clockwise)
Preceding gene: 17229401
Following gene: 17229403
Centisome position: 35.65
GC content: 39.96
Gene sequence:
>891_bases ATGGCAGAACCAATTCGCATTCTTTTACAAACAACGATCGCCTCAACTGAAGATGACTGGAGTATCTTTCGTTTTTCTCT ATTGCAGGATTATTTAAAATCTATTCAAGATAAATCAGGAAAACCGTTATTTACAGTTTTATCACGTGATCGCTCCTCTG ATGCCGACGGGAATGACCCTATTTTAGGGACACTAGACCAGTCAGACTTTGATGAACTCTGGCTATTTGCTCTAGATACT GGTGATGGTTTAACAGACAAAGATATTGCTGGAATTAACGCTTTCAGAAAACGGGGTGGTGGAATCCTCACAACACGAGA CCATCAAGATATGGGCTGCTCTATGTGCGGTTTAATTGATATTGGTGATGTTCATTATTTTAATACCAAAAACCCAGATC CTGACGATTCACGTTGGAGCCGTGATGATCCACATACAACGTATATTTCCTGGCCTAACTACCATTCTGGAGCTAATGGA GATTATCAAAAAATCACTCCTGTAGAACCAGTTCATGAACTCTTATATAACCCTCATTCACCTTCTGGCTTGATTGAATT TTTCCCATCTCATCCCCATGAAGGTGGTATTGGAGTCAACCCAAATAATTTAAATTCTCAAGTTATTGCATTAGGAAAGA GTCTAATTACTCACCGCAACTTCAACCTGATTGTCGCAACTGAACACTATACAGACAAAGAGCAAAATCGACTGGGTAGG GCAATCGCTACTTCCAGTTTTCATCATTTTGTTGATTACAATTGGGACACAGAAAAAGGTTGCCCTTCTTTTGTCGATGA ACCGCCAGGAAATGGCATGAAGTTAGAACCTCGTGCTTTAGAAGATATTCAAGCTTTTGTACGTAATGCTGCTTTATGGC TAGCCAGATAA
Upstream 100 bases:
>100_bases CTTAATTCGTCTTTATGGTATTTGATAGCAATTTGTTGTAAAGTAATGCAAGCATTAATAGCCATGAGTCAATTGGTAGA ATAATTCACCTGAAAATTTT
Downstream 100 bases:
>100_bases ATTTTTATTCTTAGCTTTGTAGTAAGCACTTTAGTGCTGAAAAAAACTTGAATTTGATGTAACCTCACCCCTAGCGGGTG GCTGAATTAATTGCGGATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MAEPIRILLQTTIASTEDDWSIFRFSLLQDYLKSIQDKSGKPLFTVLSRDRSSDADGNDPILGTLDQSDFDELWLFALDT GDGLTDKDIAGINAFRKRGGGILTTRDHQDMGCSMCGLIDIGDVHYFNTKNPDPDDSRWSRDDPHTTYISWPNYHSGANG DYQKITPVEPVHELLYNPHSPSGLIEFFPSHPHEGGIGVNPNNLNSQVIALGKSLITHRNFNLIVATEHYTDKEQNRLGR AIATSSFHHFVDYNWDTEKGCPSFVDEPPGNGMKLEPRALEDIQAFVRNAALWLAR
Sequences:
>Translated_296_residues MAEPIRILLQTTIASTEDDWSIFRFSLLQDYLKSIQDKSGKPLFTVLSRDRSSDADGNDPILGTLDQSDFDELWLFALDT GDGLTDKDIAGINAFRKRGGGILTTRDHQDMGCSMCGLIDIGDVHYFNTKNPDPDDSRWSRDDPHTTYISWPNYHSGANG DYQKITPVEPVHELLYNPHSPSGLIEFFPSHPHEGGIGVNPNNLNSQVIALGKSLITHRNFNLIVATEHYTDKEQNRLGR AIATSSFHHFVDYNWDTEKGCPSFVDEPPGNGMKLEPRALEDIQAFVRNAALWLAR >Mature_295_residues AEPIRILLQTTIASTEDDWSIFRFSLLQDYLKSIQDKSGKPLFTVLSRDRSSDADGNDPILGTLDQSDFDELWLFALDTG DGLTDKDIAGINAFRKRGGGILTTRDHQDMGCSMCGLIDIGDVHYFNTKNPDPDDSRWSRDDPHTTYISWPNYHSGANGD YQKITPVEPVHELLYNPHSPSGLIEFFPSHPHEGGIGVNPNNLNSQVIALGKSLITHRNFNLIVATEHYTDKEQNRLGRA IATSSFHHFVDYNWDTEKGCPSFVDEPPGNGMKLEPRALEDIQAFVRNAALWLAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33201; Mature: 33070
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPIRILLQTTIASTEDDWSIFRFSLLQDYLKSIQDKSGKPLFTVLSRDRSSDADGNDP CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCC ILGTLDQSDFDELWLFALDTGDGLTDKDIAGINAFRKRGGGILTTRDHQDMGCSMCGLID EEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEE IGDVHYFNTKNPDPDDSRWSRDDPHTTYISWPNYHSGANGDYQKITPVEPVHELLYNPHS ECCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCC PSGLIEFFPSHPHEGGIGVNPNNLNSQVIALGKSLITHRNFNLIVATEHYTDKEQNRLGR CCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH AIATSSFHHFVDYNWDTEKGCPSFVDEPPGNGMKLEPRALEDIQAFVRNAALWLAR HHHHCCHHEEEECCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AEPIRILLQTTIASTEDDWSIFRFSLLQDYLKSIQDKSGKPLFTVLSRDRSSDADGNDP CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCC ILGTLDQSDFDELWLFALDTGDGLTDKDIAGINAFRKRGGGILTTRDHQDMGCSMCGLID EEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEE IGDVHYFNTKNPDPDDSRWSRDDPHTTYISWPNYHSGANGDYQKITPVEPVHELLYNPHS ECCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCC PSGLIEFFPSHPHEGGIGVNPNNLNSQVIALGKSLITHRNFNLIVATEHYTDKEQNRLGR CCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH AIATSSFHHFVDYNWDTEKGCPSFVDEPPGNGMKLEPRALEDIQAFVRNAALWLAR HHHHCCHHEEEECCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA