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The map label for this gene is 17229401

Identifier: 17229401

GI number: 17229401

Start: 2285208

End: 2286455

Strand: Direct

Name: 17229401

Synonym: alr1909

Alternate gene names: NA

Gene position: 2285208-2286455 (Clockwise)

Preceding gene: 17229399

Following gene: 17229402

Centisome position: 35.63

GC content: 41.51

Gene sequence:

>1248_bases
ATGATACCAATATTAGCCGAAAGCTTAACTGAAATTTTGACTAGAGTAAAGATTGATTCAGTCCTAGTAAATACCTGCTG
GCAGTTTGCAATTTGGGGATTTGTCTCCCTACTACTAGCAGAGATATTGAGAGACAGCTACCATGCCTTGTGTCACCAAG
TCAATTGGCTTAGTAAATGGCACAACAAGCATCATGCAGCATATCGCCGGGATTTGTCGATAGTTTCGCTCAAAGCTTAC
CAAGAGTCCCAACTTTATCACGATATTTTAGAATCAAGCCTATTAGTAGTCCTATTAACGATAATTGCCTTATTTGTCCA
ACAAATCGGCTTGTGGCTGGGAGTAGCCTATGCTTGCACATTCTTGTTTGGCGCATCCCTGAGATATTTCCAAGGAACAA
TCGACACAGATTATAATCACCTACCAGGCCCATTAGAGGCAATTCCTTCTGTTTGGTGGGTAAATCGGTCTTACCATTGG
CGGCACCATTTTGATGATGTTGACGCTTATTATAGCGGTGTATTTTCCTTAGTAGATAAGATTTTGGGAACAGGACTATC
TCTCAAGGGTAAAACTGTTGCGCTGACTGGTGCGTCTGGTGCTTTAGGCCAAGCATTGACGGCGCAATTGCTTCAGCAGA
ATGCAAAAGTTGTGGCCTTAACCACTAATCCAGATAAATTACCAACCGATGGTAGTTTTAAAGTCATCGCTTGGGAGTTA
GGTAATGAAGCCGAACTCAAAGCCAGTTTAGAAAAAGTAGATATTTTGATTATCAACCACGGAATTAATGTTTACACCAG
TCGCACACCAGAAGCAATTAACTCTTCTTATGAAGTAAATGCTTTTTCTGCATTGCGGCTGATGGATATATTCTTAACCA
CAGTGAAGGGGCCACAAGCAAAAGCAACCAAAGAAATTTGGGTAAATACTTCCGAGGCGGAAGCCTCTCCTGCACTGAGT
CCGCTTTATGAACTCAGCAAACGTACATTAGGAAATCTTGTGACTCTCAAGCGCTTGGATGGGGACTGTATAATTCGCAA
ATTAATTCTTGGCCCCTTTAAAAGTCAACTCAATCCCTATGGAGTGATGTCACCACAGCAAGTAGCTCGTGCAATTTTGT
TTTTGGCGCGCCGAGATTTCCGCAATATTATCGTGACGATTAATCCTCTGACTTATGTGTTGTTTCCGTTAAAAGAAATC
AGTACGTGGTTGTACTACAAACTTTTTAGCAAGACGGCTAAAAATTAA

Upstream 100 bases:

>100_bases
AAAGACTGACACAGCCAATTGAATTTGCTTTGTAACTCTGCCTTAATCTATTCTGATCAGAATATGAACAAACATTAAGA
CAAGTAACACGCGCAAAGAC

Downstream 100 bases:

>100_bases
AATTTGGCATCTTAATTTTTAACTCATGAGAAACAGGAACCCCGAAATCTTCAAATCGGGGTTTTGAATGATTCTTAATC
AAAAAATAAATTGAATTTAA

Product: bifunctional sterol desaturase/short chain dehydrogenase

Products: NA

Alternate protein names: Bifunctional Sterol Desaturase/Short Chain Dehydrogenase; Oxidoreductase Short Chain Dehydrogenase/Reductase Family; Short-Chain Dehydrogenase; Short-Chain Dehydrogenase/Reductase Family Protein; Fatty Acid Hydroxylase; Dehydrogenases With Different Specificities; NAD Dependent Epimerase/Dehydratase Family

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MIPILAESLTEILTRVKIDSVLVNTCWQFAIWGFVSLLLAEILRDSYHALCHQVNWLSKWHNKHHAAYRRDLSIVSLKAY
QESQLYHDILESSLLVVLLTIIALFVQQIGLWLGVAYACTFLFGASLRYFQGTIDTDYNHLPGPLEAIPSVWWVNRSYHW
RHHFDDVDAYYSGVFSLVDKILGTGLSLKGKTVALTGASGALGQALTAQLLQQNAKVVALTTNPDKLPTDGSFKVIAWEL
GNEAELKASLEKVDILIINHGINVYTSRTPEAINSSYEVNAFSALRLMDIFLTTVKGPQAKATKEIWVNTSEAEASPALS
PLYELSKRTLGNLVTLKRLDGDCIIRKLILGPFKSQLNPYGVMSPQQVARAILFLARRDFRNIIVTINPLTYVLFPLKEI
STWLYYKLFSKTAKN

Sequences:

>Translated_415_residues
MIPILAESLTEILTRVKIDSVLVNTCWQFAIWGFVSLLLAEILRDSYHALCHQVNWLSKWHNKHHAAYRRDLSIVSLKAY
QESQLYHDILESSLLVVLLTIIALFVQQIGLWLGVAYACTFLFGASLRYFQGTIDTDYNHLPGPLEAIPSVWWVNRSYHW
RHHFDDVDAYYSGVFSLVDKILGTGLSLKGKTVALTGASGALGQALTAQLLQQNAKVVALTTNPDKLPTDGSFKVIAWEL
GNEAELKASLEKVDILIINHGINVYTSRTPEAINSSYEVNAFSALRLMDIFLTTVKGPQAKATKEIWVNTSEAEASPALS
PLYELSKRTLGNLVTLKRLDGDCIIRKLILGPFKSQLNPYGVMSPQQVARAILFLARRDFRNIIVTINPLTYVLFPLKEI
STWLYYKLFSKTAKN
>Mature_415_residues
MIPILAESLTEILTRVKIDSVLVNTCWQFAIWGFVSLLLAEILRDSYHALCHQVNWLSKWHNKHHAAYRRDLSIVSLKAY
QESQLYHDILESSLLVVLLTIIALFVQQIGLWLGVAYACTFLFGASLRYFQGTIDTDYNHLPGPLEAIPSVWWVNRSYHW
RHHFDDVDAYYSGVFSLVDKILGTGLSLKGKTVALTGASGALGQALTAQLLQQNAKVVALTTNPDKLPTDGSFKVIAWEL
GNEAELKASLEKVDILIINHGINVYTSRTPEAINSSYEVNAFSALRLMDIFLTTVKGPQAKATKEIWVNTSEAEASPALS
PLYELSKRTLGNLVTLKRLDGDCIIRKLILGPFKSQLNPYGVMSPQQVARAILFLARRDFRNIIVTINPLTYVLFPLKEI
STWLYYKLFSKTAKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46615; Mature: 46615

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPILAESLTEILTRVKIDSVLVNTCWQFAIWGFVSLLLAEILRDSYHALCHQVNWLSKW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HNKHHAAYRRDLSIVSLKAYQESQLYHDILESSLLVVLLTIIALFVQQIGLWLGVAYACT
HHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLFGASLRYFQGTIDTDYNHLPGPLEAIPSVWWVNRSYHWRHHFDDVDAYYSGVFSLVDK
HHHHCCHHHHCCCCCCCCCCCCCHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHH
ILGTGLSLKGKTVALTGASGALGQALTAQLLQQNAKVVALTTNPDKLPTDGSFKVIAWEL
HHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEEEC
GNEAELKASLEKVDILIINHGINVYTSRTPEAINSSYEVNAFSALRLMDIFLTTVKGPQA
CCCHHHHHHHHHEEEEEEECCCEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC
KATKEIWVNTSEAEASPALSPLYELSKRTLGNLVTLKRLDGDCIIRKLILGPFKSQLNPY
CCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
GVMSPQQVARAILFLARRDFRNIIVTINPLTYVLFPLKEISTWLYYKLFSKTAKN
CCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIPILAESLTEILTRVKIDSVLVNTCWQFAIWGFVSLLLAEILRDSYHALCHQVNWLSKW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HNKHHAAYRRDLSIVSLKAYQESQLYHDILESSLLVVLLTIIALFVQQIGLWLGVAYACT
HHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLFGASLRYFQGTIDTDYNHLPGPLEAIPSVWWVNRSYHWRHHFDDVDAYYSGVFSLVDK
HHHHCCHHHHCCCCCCCCCCCCCHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHH
ILGTGLSLKGKTVALTGASGALGQALTAQLLQQNAKVVALTTNPDKLPTDGSFKVIAWEL
HHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEEEC
GNEAELKASLEKVDILIINHGINVYTSRTPEAINSSYEVNAFSALRLMDIFLTTVKGPQA
CCCHHHHHHHHHEEEEEEECCCEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC
KATKEIWVNTSEAEASPALSPLYELSKRTLGNLVTLKRLDGDCIIRKLILGPFKSQLNPY
CCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
GVMSPQQVARAILFLARRDFRNIIVTINPLTYVLFPLKEISTWLYYKLFSKTAKN
CCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA