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The map label for this gene is 17229374

Identifier: 17229374

GI number: 17229374

Start: 2245351

End: 2246052

Strand: Reverse

Name: 17229374

Synonym: all1882

Alternate gene names: NA

Gene position: 2246052-2245351 (Counterclockwise)

Preceding gene: 17229376

Following gene: 17229373

Centisome position: 35.02

GC content: 41.6

Gene sequence:

>702_bases
ATGCTTCATCAGCAGTTTTGCATATCTATTTTGACTAGCTTAGTAACCATTGTTGCTTACCCAGCGTTAACCTATAATCC
CTTTTTGACACCATCTACTTTGCCTATAGTCCCAACAAATAGTCCAACTCTGTTAGCAGCAAGTTATCTTTCACCATTAG
AACAGCAGGTGATTGAAGAAATGAACAAAGTGCGGACAAATCCTAGATCATATGTACCTATCATAGAAAATTATAAAAAA
CGTTTCCAAGGTAATCGGGTGAGAATTTCTAGTAATACCTATCTTGTTACCCAAGAAGGAGTCAAGGCGGTAAATGAGGC
GATCGCTTTTCTCAAGTCAGCCCGTCCTGTGGGAAAATTAAGAGCATCTAAGGGAATGTCTTTAGGTGCTAGAGACCACA
CGAAAGACCAAGGCCCAAAAGGTGTAACTGGTCATGATGGTAGCGACGGTAGCACCCCCTTCACTCGCATTAATCGCTAT
GGAAAATGGCAAACCACGGCTGCGGAGAATATCAGCTACGGCCCAAATACTGCTCAAGATATTGTCATGCAATTGATTAT
TGATGATGGCGTACCATCACGCGGTCATCGTACTAATATTTTTAACGGTGCTTTTAAGGTCGCGGGTGTTGCTTACGGTA
ATCACAAAGTTTACAGGACAATATGTGTAATTACTTATGCAGGCGGGTTTTTGGAGAAATAA

Upstream 100 bases:

>100_bases
TCAGCGTTTTTATGCAGTGCAAGCATCAAAACCTTATACAAACACTTGTTTTTCATTATTTGTCAATTAAATACCAAAGT
ATAAAATTTTGAGGTAGTTG

Downstream 100 bases:

>100_bases
AACCAATTCGCAATTACGTTTTCTCACAGGATTTTAACCCCGCGACAAAACCTTTCGCCTTTAAAGGCGAGGTTTTAAAC
CTCATTGTTTCGATAAGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Allergen V5/Tpx-1 Family Protein; SCP-Like Extracellular Protein; Allergen V5/Tpx-1 Related Protein; Allergen V5/Tpx-1 ; Lipoprotein

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MLHQQFCISILTSLVTIVAYPALTYNPFLTPSTLPIVPTNSPTLLAASYLSPLEQQVIEEMNKVRTNPRSYVPIIENYKK
RFQGNRVRISSNTYLVTQEGVKAVNEAIAFLKSARPVGKLRASKGMSLGARDHTKDQGPKGVTGHDGSDGSTPFTRINRY
GKWQTTAAENISYGPNTAQDIVMQLIIDDGVPSRGHRTNIFNGAFKVAGVAYGNHKVYRTICVITYAGGFLEK

Sequences:

>Translated_233_residues
MLHQQFCISILTSLVTIVAYPALTYNPFLTPSTLPIVPTNSPTLLAASYLSPLEQQVIEEMNKVRTNPRSYVPIIENYKK
RFQGNRVRISSNTYLVTQEGVKAVNEAIAFLKSARPVGKLRASKGMSLGARDHTKDQGPKGVTGHDGSDGSTPFTRINRY
GKWQTTAAENISYGPNTAQDIVMQLIIDDGVPSRGHRTNIFNGAFKVAGVAYGNHKVYRTICVITYAGGFLEK
>Mature_233_residues
MLHQQFCISILTSLVTIVAYPALTYNPFLTPSTLPIVPTNSPTLLAASYLSPLEQQVIEEMNKVRTNPRSYVPIIENYKK
RFQGNRVRISSNTYLVTQEGVKAVNEAIAFLKSARPVGKLRASKGMSLGARDHTKDQGPKGVTGHDGSDGSTPFTRINRY
GKWQTTAAENISYGPNTAQDIVMQLIIDDGVPSRGHRTNIFNGAFKVAGVAYGNHKVYRTICVITYAGGFLEK

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25594; Mature: 25594

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHQQFCISILTSLVTIVAYPALTYNPFLTPSTLPIVPTNSPTLLAASYLSPLEQQVIEE
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHH
MNKVRTNPRSYVPIIENYKKRFQGNRVRISSNTYLVTQEGVKAVNEAIAFLKSARPVGKL
HHHHHCCCCCCCCHHHHHHHHHCCCEEEEECCEEEEEHHHHHHHHHHHHHHHHCCCHHHH
RASKGMSLGARDHTKDQGPKGVTGHDGSDGSTPFTRINRYGKWQTTAAENISYGPNTAQD
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCCCCCHHHH
IVMQLIIDDGVPSRGHRTNIFNGAFKVAGVAYGNHKVYRTICVITYAGGFLEK
HHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEHHEEEHEECCHHCCC
>Mature Secondary Structure
MLHQQFCISILTSLVTIVAYPALTYNPFLTPSTLPIVPTNSPTLLAASYLSPLEQQVIEE
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHH
MNKVRTNPRSYVPIIENYKKRFQGNRVRISSNTYLVTQEGVKAVNEAIAFLKSARPVGKL
HHHHHCCCCCCCCHHHHHHHHHCCCEEEEECCEEEEEHHHHHHHHHHHHHHHHCCCHHHH
RASKGMSLGARDHTKDQGPKGVTGHDGSDGSTPFTRINRYGKWQTTAAENISYGPNTAQD
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCCCCCHHHH
IVMQLIIDDGVPSRGHRTNIFNGAFKVAGVAYGNHKVYRTICVITYAGGFLEK
HHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEHHEEEHEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA