| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is Dml [H]
Identifier: 17229355
GI number: 17229355
Start: 2225862
End: 2226725
Strand: Reverse
Name: Dml [H]
Synonym: all1863
Alternate gene names: 17229355
Gene position: 2226725-2225862 (Counterclockwise)
Preceding gene: 17229356
Following gene: 17229354
Centisome position: 34.72
GC content: 45.6
Gene sequence:
>864_bases ATGTCTTCTAGCCACAAACTGCGGCAGTTACTTGCAAATCCTGAAATTATTGTAATTCCTGGTATCTACGATTGCCTGAG TGCCAAACTGGCTGAAAATATTGGTTTTGATGTGGTGGCTACCAGTGGTTTTGGTATTGCTGCATCTACTTTGGGTTTGC CAGATTACGGTTTTCTTACAGCTACAGAAGCGCTTTATAGTGTGGGGCGTATTGCTCAGTCCGTGAGTGTTCCTCTCATT GCCGATTTAGATACTGGCTATGGCAATGCTTTAAATGTGATGCGGACTATCAAGGATGCTGTGCAGTTGGGTGTGGCGGG CGTATTGTTAGAAGACCAAGAATGGCCGAAAAAGTGCGGACATTTTGAAGGGAAGCGAGTTATACCCACATCTGAACACG CTGGCAAAATTCGTGCAGCAGTAGAGGCGCGGGGTGATAGTGGTTTAGTCATTATTGCGCGTACCGATGCCCGTGGCCCA CTGGGTTTAGAGGAAGCGATCGCCCGTGGTCATGCTTACATTGAGGCAGGCGCAGATATACTATTTGTGGAAGCTCCCCA GTCTGTGGCAGAATTAAAGGCGATCGCCTCAGCTTTCCCTCACACACCCCTAGTAGCCAATATTGTTGAAGGCGGCAAAA CTCCCCCACTATCTGCATCAGAACTACAAGATTTAGGCTTTAAAATCGTGTTTTTCCCCCTTACTGGTTTATTGGCAGTA ACGCAAACTTTAACAGCTTGCTTAAGTCATATTAAAGAACAGGGAAGCACAGCTAATTTTACTGACATAGTGAACTTTCA AGATTTTCAAGCCCTTGTCGGCGTTCCCCAATTTCTGCAAATGGAACAAAAGTTTAAATCGTAA
Upstream 100 bases:
>100_bases TATATGGCGTACAGTCCTCTTTAATTACGAATTACGAACTACAAATTACGAATTATTCCCTTGTTGTATCCTCAAACTGT TGCGTAATTTGTATTTTTAT
Downstream 100 bases:
>100_bases GTCAAATAATTCTCATTTCCCGACTATGGCAAGATTAGCTAGGATCAGCATCTTGCCTTTGTGTTCAATTAACCTGCCAT CTCAAAAGATTACCTTGAGT
Product: carboxyphosphonoenolpyruvate phosphonomutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MSSSHKLRQLLANPEIIVIPGIYDCLSAKLAENIGFDVVATSGFGIAASTLGLPDYGFLTATEALYSVGRIAQSVSVPLI ADLDTGYGNALNVMRTIKDAVQLGVAGVLLEDQEWPKKCGHFEGKRVIPTSEHAGKIRAAVEARGDSGLVIIARTDARGP LGLEEAIARGHAYIEAGADILFVEAPQSVAELKAIASAFPHTPLVANIVEGGKTPPLSASELQDLGFKIVFFPLTGLLAV TQTLTACLSHIKEQGSTANFTDIVNFQDFQALVGVPQFLQMEQKFKS
Sequences:
>Translated_287_residues MSSSHKLRQLLANPEIIVIPGIYDCLSAKLAENIGFDVVATSGFGIAASTLGLPDYGFLTATEALYSVGRIAQSVSVPLI ADLDTGYGNALNVMRTIKDAVQLGVAGVLLEDQEWPKKCGHFEGKRVIPTSEHAGKIRAAVEARGDSGLVIIARTDARGP LGLEEAIARGHAYIEAGADILFVEAPQSVAELKAIASAFPHTPLVANIVEGGKTPPLSASELQDLGFKIVFFPLTGLLAV TQTLTACLSHIKEQGSTANFTDIVNFQDFQALVGVPQFLQMEQKFKS >Mature_286_residues SSSHKLRQLLANPEIIVIPGIYDCLSAKLAENIGFDVVATSGFGIAASTLGLPDYGFLTATEALYSVGRIAQSVSVPLIA DLDTGYGNALNVMRTIKDAVQLGVAGVLLEDQEWPKKCGHFEGKRVIPTSEHAGKIRAAVEARGDSGLVIIARTDARGPL GLEEAIARGHAYIEAGADILFVEAPQSVAELKAIASAFPHTPLVANIVEGGKTPPLSASELQDLGFKIVFFPLTGLLAVT QTLTACLSHIKEQGSTANFTDIVNFQDFQALVGVPQFLQMEQKFKS
Specific function: Catalyzes the formation of proponate and pyruvate from (2R,3S)-2,3-dimethylmalate. Has no activity toward dimethylmaleate, malate, citramalate, isocitrate and citrate [H]
COG id: COG2513
COG function: function code G; PEP phosphonomutase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the isocitrate lyase/PEP mutase superfamily [H]
Homologues:
Organism=Escherichia coli, GI1786525, Length=282, Percent_Identity=35.4609929078014, Blast_Score=172, Evalue=2e-44, Organism=Escherichia coli, GI1790445, Length=205, Percent_Identity=30.2439024390244, Blast_Score=72, Evalue=4e-14, Organism=Caenorhabditis elegans, GI71982926, Length=135, Percent_Identity=38.5185185185185, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17561814, Length=135, Percent_Identity=38.5185185185185, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6320908, Length=103, Percent_Identity=35.9223300970874, Blast_Score=62, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000918 - InterPro: IPR018523 - InterPro: IPR015813 [H]
Pfam domain/function: PF00463 ICL [H]
EC number: =4.1.3.32 [H]
Molecular weight: Translated: 30415; Mature: 30284
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSHKLRQLLANPEIIVIPGIYDCLSAKLAENIGFDVVATSGFGIAASTLGLPDYGFLT CCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCCCHHH ATEALYSVGRIAQSVSVPLIADLDTGYGNALNVMRTIKDAVQLGVAGVLLEDQEWPKKCG HHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHCC HFEGKRVIPTSEHAGKIRAAVEARGDSGLVIIARTDARGPLGLEEAIARGHAYIEAGADI CCCCCCCCCCCCCCCHHHHEEEECCCCCEEEEEECCCCCCCCHHHHHHCCCCEEECCCCE LFVEAPQSVAELKAIASAFPHTPLVANIVEGGKTPPLSASELQDLGFKIVFFPLTGLLAV EEEECCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHCCCEEEEHHHHHHHHH TQTLTACLSHIKEQGSTANFTDIVNFQDFQALVGVPQFLQMEQKFKS HHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure SSSHKLRQLLANPEIIVIPGIYDCLSAKLAENIGFDVVATSGFGIAASTLGLPDYGFLT CCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCCCHHH ATEALYSVGRIAQSVSVPLIADLDTGYGNALNVMRTIKDAVQLGVAGVLLEDQEWPKKCG HHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHCC HFEGKRVIPTSEHAGKIRAAVEARGDSGLVIIARTDARGPLGLEEAIARGHAYIEAGADI CCCCCCCCCCCCCCCHHHHEEEECCCCCEEEEEECCCCCCCCHHHHHHCCCCEEECCCCE LFVEAPQSVAELKAIASAFPHTPLVANIVEGGKTPPLSASELQDLGFKIVFFPLTGLLAV EEEECCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHCCCEEEEHHHHHHHHH TQTLTACLSHIKEQGSTANFTDIVNFQDFQALVGVPQFLQMEQKFKS HHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA