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The map label for this gene is ygeR [C]

Identifier: 17229354

GI number: 17229354

Start: 2224411

End: 2225412

Strand: Reverse

Name: ygeR [C]

Synonym: all1862

Alternate gene names: 17229354

Gene position: 2225412-2224411 (Counterclockwise)

Preceding gene: 17229355

Following gene: 17229353

Centisome position: 34.7

GC content: 41.52

Gene sequence:

>1002_bases
ATGCTTTTAAAACTAGCCAAAAAAAGTACTATCCTTCGCTGCTGTACTTACTTATGTATTACTTTAGCCTCTTTAATTGC
AGTCCTCAGTACAAATACTAGTGCCTTAACTCAAGTAGCAGGTAATTCGCAAATTCCCCAAAAACCTATAGCTATTCCTA
TTCCAACTCTTAGTACTAACTTGATTTGGCCTACGCAAGGATATATTTCCCAAGGCTTTCGCAAATATCAACATGAAGGA
ATTGATATTGCAGCCCCATCGGGAACACCAATTTTCGCGGCGGCGACTGGGAAAGTAGTCAAAGTCGGATGGGATGAATG
GGGACTAGGTAATGCTATCGAAATCAAACATCCTAATGGTAGCGTCACTGTTTACGGACATAATCGCCGTTTGTTAGTCA
GCAAAGGTCAACAGGTGAAACAAGGACAAATCATCGCGGAAATGGGGTCTACAGGTAATAGTACCGCACCACATTTACAC
TTTGAATATTATCCCAATGGGAAAGTAGCCGTTAACCCCATGACTGTTTTAACATCTTCTACCGCCAGCAAAATTTCCTC
ACAACCTGTTGCTAGTAATACAGCTAAAGTTAATCAAGCTAGGCGAGTACAGGAAAATCCCCCAACCAAACCTGAAAATA
ATTCTTCCCCCACTCCCTCCATACCAATCCCCATAGAACAGCCAGTCTCACCCGCGCAAAACATTCCCGTAGCGTTTGCA
CCGATAGTTACTGATACGAGATGCAGTGGTTTGACGATACTTGAAGGTGAGACAACAAATATACTAGTCCGAGTCTGCAA
CGAAAATGGGCAGTTGTTTTATATTGGTGAGTTGAAACAAAATCCAAACCAGCCCGTCAAAATACCAGCCTGGAGTATCG
GTAAAAATAGATATCAGGCAGATAATGGTAGTTTCTCTTACGTAGTTAGTCCGGAACAAGTGGAAATTTGGCGTAATGGT
AGTCAGATACGTACCGATAGTTTTTATACTTCTAATAAATAA

Upstream 100 bases:

>100_bases
AGACATCTATTAAAGTTATAAATTTGACCAAAAACTTCCCTGATAATTCCAGCATGAGCATGAAATAGCGAATATCAATT
AAGTATCCGAAAGATTTTTT

Downstream 100 bases:

>100_bases
AAAAATCAGGTTAACTATGAGTACAAAGATGAGCATTTGCTGATATTTCTTTAAATTTCATCAATGATGAAAAATGTGCC
GACAATTGTTTTTATAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MLLKLAKKSTILRCCTYLCITLASLIAVLSTNTSALTQVAGNSQIPQKPIAIPIPTLSTNLIWPTQGYISQGFRKYQHEG
IDIAAPSGTPIFAAATGKVVKVGWDEWGLGNAIEIKHPNGSVTVYGHNRRLLVSKGQQVKQGQIIAEMGSTGNSTAPHLH
FEYYPNGKVAVNPMTVLTSSTASKISSQPVASNTAKVNQARRVQENPPTKPENNSSPTPSIPIPIEQPVSPAQNIPVAFA
PIVTDTRCSGLTILEGETTNILVRVCNENGQLFYIGELKQNPNQPVKIPAWSIGKNRYQADNGSFSYVVSPEQVEIWRNG
SQIRTDSFYTSNK

Sequences:

>Translated_333_residues
MLLKLAKKSTILRCCTYLCITLASLIAVLSTNTSALTQVAGNSQIPQKPIAIPIPTLSTNLIWPTQGYISQGFRKYQHEG
IDIAAPSGTPIFAAATGKVVKVGWDEWGLGNAIEIKHPNGSVTVYGHNRRLLVSKGQQVKQGQIIAEMGSTGNSTAPHLH
FEYYPNGKVAVNPMTVLTSSTASKISSQPVASNTAKVNQARRVQENPPTKPENNSSPTPSIPIPIEQPVSPAQNIPVAFA
PIVTDTRCSGLTILEGETTNILVRVCNENGQLFYIGELKQNPNQPVKIPAWSIGKNRYQADNGSFSYVVSPEQVEIWRNG
SQIRTDSFYTSNK
>Mature_333_residues
MLLKLAKKSTILRCCTYLCITLASLIAVLSTNTSALTQVAGNSQIPQKPIAIPIPTLSTNLIWPTQGYISQGFRKYQHEG
IDIAAPSGTPIFAAATGKVVKVGWDEWGLGNAIEIKHPNGSVTVYGHNRRLLVSKGQQVKQGQIIAEMGSTGNSTAPHLH
FEYYPNGKVAVNPMTVLTSSTASKISSQPVASNTAKVNQARRVQENPPTKPENNSSPTPSIPIPIEQPVSPAQNIPVAFA
PIVTDTRCSGLTILEGETTNILVRVCNENGQLFYIGELKQNPNQPVKIPAWSIGKNRYQADNGSFSYVVSPEQVEIWRNG
SQIRTDSFYTSNK

Specific function: Unknown

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87082174, Length=118, Percent_Identity=44.9152542372881, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1789099, Length=117, Percent_Identity=45.2991452991453, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI87081989, Length=98, Percent_Identity=44.8979591836735, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87082297, Length=117, Percent_Identity=37.6068376068376, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 36063; Mature: 36063

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKLAKKSTILRCCTYLCITLASLIAVLSTNTSALTQVAGNSQIPQKPIAIPIPTLSTN
CEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEECCCCCCC
LIWPTQGYISQGFRKYQHEGIDIAAPSGTPIFAAATGKVVKVGWDEWGLGNAIEIKHPNG
EEECCHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCEEEECCCCCCCCCEEEEECCCC
SVTVYGHNRRLLVSKGQQVKQGQIIAEMGSTGNSTAPHLHFEYYPNGKVAVNPMTVLTSS
CEEEEECCCEEEEECCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCEEEECCEEEEECC
TASKISSQPVASNTAKVNQARRVQENPPTKPENNSSPTPSIPIPIEQPVSPAQNIPVAFA
HHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
PIVTDTRCSGLTILEGETTNILVRVCNENGQLFYIGELKQNPNQPVKIPAWSIGKNRYQA
EEEECCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCCCEEECEEECCCCEEEC
DNGSFSYVVSPEQVEIWRNGSQIRTDSFYTSNK
CCCCEEEEECCCEEEEECCCCEEEECCEEECCC
>Mature Secondary Structure
MLLKLAKKSTILRCCTYLCITLASLIAVLSTNTSALTQVAGNSQIPQKPIAIPIPTLSTN
CEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEECCCCCCC
LIWPTQGYISQGFRKYQHEGIDIAAPSGTPIFAAATGKVVKVGWDEWGLGNAIEIKHPNG
EEECCHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCEEEECCCCCCCCCEEEEECCCC
SVTVYGHNRRLLVSKGQQVKQGQIIAEMGSTGNSTAPHLHFEYYPNGKVAVNPMTVLTSS
CEEEEECCCEEEEECCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCEEEECCEEEEECC
TASKISSQPVASNTAKVNQARRVQENPPTKPENNSSPTPSIPIPIEQPVSPAQNIPVAFA
HHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
PIVTDTRCSGLTILEGETTNILVRVCNENGQLFYIGELKQNPNQPVKIPAWSIGKNRYQA
EEEECCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCCCEEECEEECCCCEEEC
DNGSFSYVVSPEQVEIWRNGSQIRTDSFYTSNK
CCCCEEEEECCCEEEEECCCCEEEECCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]