| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229341
Identifier: 17229341
GI number: 17229341
Start: 2211917
End: 2212735
Strand: Reverse
Name: 17229341
Synonym: all1849
Alternate gene names: NA
Gene position: 2212735-2211917 (Counterclockwise)
Preceding gene: 17229353
Following gene: 17229340
Centisome position: 34.5
GC content: 43.1
Gene sequence:
>819_bases ATGGTTACAACCAAAAAGGCAGAGATAACTAATATGGCAGCGTCTATTTATCCATCTCCAGTAGATAAGCTATTGACCTA CGGTGATTGTAGTAAGATGCGAGATATCCCCAACTATGTGCAGAAATTTGGTTTTAATGCAGACCATGTTCCTGACTTAA TTCGCATGGCGACCGATGCGGAATTAAATAATGCTGACCAAGATAGTGTAGAAGTCTGGAGTCCAGTCCATGCGATACGG GTATTGACTCAATTAAGTGCAGAAGCAGCAATTCAACCCCTGGTAAATCTATTTCACGAAGTCGATGACGATTGGACACC AGGCGAATTAGCTGAGTACTTTGCTACAGTTGGGGCTGCGGCGATTCCTACACTAGAAGCATATCTGGGGGATTCTTCTC ATGATGCTTACCAACTCGCCGATGCGGCTACAGCCTTAACTAAAATTGCTGAGAAACATCCTGATTTACGTGACCGATGT GTAGCAGTGTTGACGCAAAGGTTAGAAGACTTTGCCAATAATGACCCAGAATTTAACGCTTTTTTGATTGGTGAATTGCT TGATTTACAAGCTGTCGAGTCTGCACCAGTGATAGAACAAGCGTTTGTGGCTAATCGAGTACCACCTTTCATTGTCGGTG ATTGGGATGATGTACAGGTGGAATTGGGGTTGAAAACCCGTGAAGAAGTTCCCGAAAAAAGGTTTGCGCTGGAAGAATTA ATCAATTACTACAAGCAGGAACTTGGACAACCCCGTGGTTTTGCACCACTTGTGAGTAAGAAGCCGAAGAAGCAAAAGAA AAATAAAAAACGCAAGTAA
Upstream 100 bases:
>100_bases TTTACATCTTTAGCGTTGTATCAGTTTATAAGTGTTTGGCAATGCTAAATATAAGTAGTTCAAATAGTTCTGTTCCAAGT GATGGCAAATCATAGGGATA
Downstream 100 bases:
>100_bases TAAAGTGCTGAGTTCCTAGTCAATAATTATTTGGTTGGCTCAAATTCATATCTTGAAGTTTTCATCAGCCGATGAACTGT CAAATTTTCTCCAACTCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MVTTKKAEITNMAASIYPSPVDKLLTYGDCSKMRDIPNYVQKFGFNADHVPDLIRMATDAELNNADQDSVEVWSPVHAIR VLTQLSAEAAIQPLVNLFHEVDDDWTPGELAEYFATVGAAAIPTLEAYLGDSSHDAYQLADAATALTKIAEKHPDLRDRC VAVLTQRLEDFANNDPEFNAFLIGELLDLQAVESAPVIEQAFVANRVPPFIVGDWDDVQVELGLKTREEVPEKRFALEEL INYYKQELGQPRGFAPLVSKKPKKQKKNKKRK
Sequences:
>Translated_272_residues MVTTKKAEITNMAASIYPSPVDKLLTYGDCSKMRDIPNYVQKFGFNADHVPDLIRMATDAELNNADQDSVEVWSPVHAIR VLTQLSAEAAIQPLVNLFHEVDDDWTPGELAEYFATVGAAAIPTLEAYLGDSSHDAYQLADAATALTKIAEKHPDLRDRC VAVLTQRLEDFANNDPEFNAFLIGELLDLQAVESAPVIEQAFVANRVPPFIVGDWDDVQVELGLKTREEVPEKRFALEEL INYYKQELGQPRGFAPLVSKKPKKQKKNKKRK >Mature_272_residues MVTTKKAEITNMAASIYPSPVDKLLTYGDCSKMRDIPNYVQKFGFNADHVPDLIRMATDAELNNADQDSVEVWSPVHAIR VLTQLSAEAAIQPLVNLFHEVDDDWTPGELAEYFATVGAAAIPTLEAYLGDSSHDAYQLADAATALTKIAEKHPDLRDRC VAVLTQRLEDFANNDPEFNAFLIGELLDLQAVESAPVIEQAFVANRVPPFIVGDWDDVQVELGLKTREEVPEKRFALEEL INYYKQELGQPRGFAPLVSKKPKKQKKNKKRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30384; Mature: 30384
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTTKKAEITNMAASIYPSPVDKLLTYGDCSKMRDIPNYVQKFGFNADHVPDLIRMATDA CCCCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC ELNNADQDSVEVWSPVHAIRVLTQLSAEAAIQPLVNLFHEVDDDWTPGELAEYFATVGAA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AIPTLEAYLGDSSHDAYQLADAATALTKIAEKHPDLRDRCVAVLTQRLEDFANNDPEFNA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHH FLIGELLDLQAVESAPVIEQAFVANRVPPFIVGDWDDVQVELGLKTREEVPEKRFALEEL HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEECCCCCEEEEECCCCHHHCHHHHHHHHHH INYYKQELGQPRGFAPLVSKKPKKQKKNKKRK HHHHHHHHCCCCCCCCHHCCCCHHHHHCCCCC >Mature Secondary Structure MVTTKKAEITNMAASIYPSPVDKLLTYGDCSKMRDIPNYVQKFGFNADHVPDLIRMATDA CCCCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC ELNNADQDSVEVWSPVHAIRVLTQLSAEAAIQPLVNLFHEVDDDWTPGELAEYFATVGAA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AIPTLEAYLGDSSHDAYQLADAATALTKIAEKHPDLRDRCVAVLTQRLEDFANNDPEFNA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHH FLIGELLDLQAVESAPVIEQAFVANRVPPFIVGDWDDVQVELGLKTREEVPEKRFALEEL HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEECCCCCEEEEECCCCHHHCHHHHHHHHHH INYYKQELGQPRGFAPLVSKKPKKQKKNKKRK HHHHHHHHCCCCCCCCHHCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA