Click here to switch to the map view.

The map label for this gene is 17229336

Identifier: 17229336

GI number: 17229336

Start: 2206295

End: 2207464

Strand: Reverse

Name: 17229336

Synonym: all1844

Alternate gene names: NA

Gene position: 2207464-2206295 (Counterclockwise)

Preceding gene: 17229338

Following gene: 17229335

Centisome position: 34.42

GC content: 45.64

Gene sequence:

>1170_bases
GTGAAGATAAAAACAAAAACTCGCACTCTGCAATTCAAGGTGAACGACATGAATGGCACAATCCGCGCCGGCAATCTCTT
CGGCATTCCTTTTTATATCCATCCGTCGTGGTTTTTAGTTCTAGGCTTAGTTACCTGGAGTTATAGCGGTGGACTCTTAG
CAGAATTTCCCCAACTTTCTGGGAGGCTGGCTGTGGTGCTGGGATTGGCGACGGCGTTGTTGTTGTTTGCGTCTGTCGTC
GCCCATGAATTAGGACATAGCTTTGTTGCTATCCGTCAAGGAATTAACGTTAATTCCATCACACTATTTATCTTTGGTGG
CTTGGCTAGCTTAGAAAAAGAGTCCAAAACACCAGCCGGAGCCTTCTGGGTAGCGATCGCCGGGCCTTTGGTCAGTTTAT
TATTATGTGGTACCGTCACAACAATTGGCGTGACTACGGCAGTCACAGGGCCATTGGCGGCGATTCTGGGAGTTCTGGCT
TCTGTGAACTTAGCATTGGCATTGTTTAACCTGATTCCTGGCTTACCTTTGGATGGCGGAAACATCCTCAAAGCCATTGT
TTGGAAGGTGACAGGTAATCCATATAAAGGTGTCACTTTTGCTAGTCGCGTAGGACAAATATTTGGTTGGGTGGCGATCG
CTTCTGGTATCTTCCCCATACTATATTTTGGTAGCTTCGCCAACGTGTGGAATTTGTTAATCGGCTTCTTTTTACTACAA
AACGCTGGTAACGCAGCCCAATTTGCCAGAGTGCAAGAAAAACTCACAGGCTTAACAGCAGCCGACGCTGTAACGACAGA
TAGCCCTATTGTTTCTGCCCATCTTAGCTTGAGAGAATTTGCTGATGATCAGATCATTCAAGGACAGAACTGGCGACGGT
TTTTAGTTACCAACAACGCAGGACAATTAGTAGGTGCGATCGCTCTTGATGATTTGCGAAACATCCCCACCATATCCTGG
ACAGAAACTCAAATTCAACAAGTGATGCGGCCGATTCAATCTACCACCATCAAATCTAGTCAACCATTGTTAGAAGTAGT
GCAATTACTAGAGCAACAAAAATTGTCTGCCCTCCCCGTAATTCTTGACAATGGCGTACTACTAGGCATTTTAGAAAAAG
CCGCTATCATCCAGCTATTGCAAAACGGAACCCAACCTAACCCTGCATAA

Upstream 100 bases:

>100_bases
CTCCAGTCCCTTATCCCAAAAACCACACCTAAACAGACGGACACCACTACCATTGGAAATATTAAAATTGCTTAACACTT
CGTTACACTAAGAACAGCGA

Downstream 100 bases:

>100_bases
TTTTCTCATCGAAAAAACGCTCCTTCTATCAAATCCCTTAGAGTTGCTGAGGGATTTTTTTTAATCATTATTATTGATGT
ATGCAGTCCATAGGGATTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MKIKTKTRTLQFKVNDMNGTIRAGNLFGIPFYIHPSWFLVLGLVTWSYSGGLLAEFPQLSGRLAVVLGLATALLLFASVV
AHELGHSFVAIRQGINVNSITLFIFGGLASLEKESKTPAGAFWVAIAGPLVSLLLCGTVTTIGVTTAVTGPLAAILGVLA
SVNLALALFNLIPGLPLDGGNILKAIVWKVTGNPYKGVTFASRVGQIFGWVAIASGIFPILYFGSFANVWNLLIGFFLLQ
NAGNAAQFARVQEKLTGLTAADAVTTDSPIVSAHLSLREFADDQIIQGQNWRRFLVTNNAGQLVGAIALDDLRNIPTISW
TETQIQQVMRPIQSTTIKSSQPLLEVVQLLEQQKLSALPVILDNGVLLGILEKAAIIQLLQNGTQPNPA

Sequences:

>Translated_389_residues
MKIKTKTRTLQFKVNDMNGTIRAGNLFGIPFYIHPSWFLVLGLVTWSYSGGLLAEFPQLSGRLAVVLGLATALLLFASVV
AHELGHSFVAIRQGINVNSITLFIFGGLASLEKESKTPAGAFWVAIAGPLVSLLLCGTVTTIGVTTAVTGPLAAILGVLA
SVNLALALFNLIPGLPLDGGNILKAIVWKVTGNPYKGVTFASRVGQIFGWVAIASGIFPILYFGSFANVWNLLIGFFLLQ
NAGNAAQFARVQEKLTGLTAADAVTTDSPIVSAHLSLREFADDQIIQGQNWRRFLVTNNAGQLVGAIALDDLRNIPTISW
TETQIQQVMRPIQSTTIKSSQPLLEVVQLLEQQKLSALPVILDNGVLLGILEKAAIIQLLQNGTQPNPA
>Mature_389_residues
MKIKTKTRTLQFKVNDMNGTIRAGNLFGIPFYIHPSWFLVLGLVTWSYSGGLLAEFPQLSGRLAVVLGLATALLLFASVV
AHELGHSFVAIRQGINVNSITLFIFGGLASLEKESKTPAGAFWVAIAGPLVSLLLCGTVTTIGVTTAVTGPLAAILGVLA
SVNLALALFNLIPGLPLDGGNILKAIVWKVTGNPYKGVTFASRVGQIFGWVAIASGIFPILYFGSFANVWNLLIGFFLLQ
NAGNAAQFARVQEKLTGLTAADAVTTDSPIVSAHLSLREFADDQIIQGQNWRRFLVTNNAGQLVGAIALDDLRNIPTISW
TETQIQQVMRPIQSTTIKSSQPLLEVVQLLEQQKLSALPVILDNGVLLGILEKAAIIQLLQNGTQPNPA

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644
- InterPro:   IPR008915
- InterPro:   IPR016483 [H]

Pfam domain/function: PF00571 CBS; PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 41546; Mature: 41546

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKTKTRTLQFKVNDMNGTIRAGNLFGIPFYIHPSWFLVLGLVTWSYSGGLLAEFPQLS
CCCCCCEEEEEEEEECCCCEEEECCEEEEEEEECCHHHHHHHHHHHCCCCCHHHHCHHHC
GRLAVVLGLATALLLFASVVAHELGHSFVAIRQGINVNSITLFIFGGLASLEKESKTPAG
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEECCHHHHHHHCCCCCC
AFWVAIAGPLVSLLLCGTVTTIGVTTAVTGPLAAILGVLASVNLALALFNLIPGLPLDGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
NILKAIVWKVTGNPYKGVTFASRVGQIFGWVAIASGIFPILYFGSFANVWNLLIGFFLLQ
HHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAGNAAQFARVQEKLTGLTAADAVTTDSPIVSAHLSLREFADDQIIQGQNWRRFLVTNNA
CCCCHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHCCCCEECCCCCEEEEEECCC
GQLVGAIALDDLRNIPTISWTETQIQQVMRPIQSTTIKSSQPLLEVVQLLEQQKLSALPV
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCE
ILDNGVLLGILEKAAIIQLLQNGTQPNPA
EECCCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKIKTKTRTLQFKVNDMNGTIRAGNLFGIPFYIHPSWFLVLGLVTWSYSGGLLAEFPQLS
CCCCCCEEEEEEEEECCCCEEEECCEEEEEEEECCHHHHHHHHHHHCCCCCHHHHCHHHC
GRLAVVLGLATALLLFASVVAHELGHSFVAIRQGINVNSITLFIFGGLASLEKESKTPAG
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEECCHHHHHHHCCCCCC
AFWVAIAGPLVSLLLCGTVTTIGVTTAVTGPLAAILGVLASVNLALALFNLIPGLPLDGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
NILKAIVWKVTGNPYKGVTFASRVGQIFGWVAIASGIFPILYFGSFANVWNLLIGFFLLQ
HHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAGNAAQFARVQEKLTGLTAADAVTTDSPIVSAHLSLREFADDQIIQGQNWRRFLVTNNA
CCCCHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHCCCCEECCCCCEEEEEECCC
GQLVGAIALDDLRNIPTISWTETQIQQVMRPIQSTTIKSSQPLLEVVQLLEQQKLSALPV
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCE
ILDNGVLLGILEKAAIIQLLQNGTQPNPA
EECCCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]