| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229299
Identifier: 17229299
GI number: 17229299
Start: 2172169
End: 2173023
Strand: Reverse
Name: 17229299
Synonym: all1807
Alternate gene names: NA
Gene position: 2173023-2172169 (Counterclockwise)
Preceding gene: 17229303
Following gene: 17229298
Centisome position: 33.88
GC content: 43.51
Gene sequence:
>855_bases ATGGCAGGAAACTTTGGTTCTCCCAGTCCCACGCAACCACTGAGTGTAGGAAATGTTGTCAGTGCAGGGCTACGGTTGTA TCGTTCTCATCTTAAGGACTACTTTCTATTGGCATTGAAGGCTTATGTCTGGGTGCTAGTTCCAGTTTATGGGTGGGCCA AGTTTTATGCCCTTACATCGCTGATTTCGCGCCTGGCCTTTGGTGAATTGGTGAATCAGCCAGAAAGCATTTCATCGGGT GAACGTTTTGTTAATTCCCGACTGTGGCAGTTTTTGTTGGCAATGCTCTTATTACTTCTTGTTGGTATTGGCATTGGTTT AGGTGTAGTAATTTTATCTATTTTATTAGGAGTGGTATCGGCTGCATTTGTTGGCGGAGTAGGACAACAAGCCAACCCTG CGACTTATCTTGTGTTTATTCTCGCGGCTTTTGTCATCGGTATTGTGGCGCTATTAGGGATTTTGTGGTTGGTGACACGT TTTTACTTAGTAGATTTGCCTTTAGCTGTAGAGGAAGGTATCGAGGCTACTTCTGCCATTAGTCGCAGTTGGGAATTAAC CCAAGGTCACGTTTGGCGGATACTGTTGATTTCCTTTGTTGGTTTCTTAATCACAATCCCAATTCAAATTGTGGTTCAGA TTGCTACAAGTATTCTGCAAGCGGCATTTTTACCTTTAATCAGTGAGGGTAATACTGTATTCGCTCTGCTTTATTTTGTC CTGGTTTTAGTTCTTATTTCCGGCAGTGGTGCGTTGTTGATCCCCTTTTGGCAAAGCATCAAGGCTGTAATTTATTATGA CTTGCGGAGTCGTCGTGAAGGGTTAGGCTTGCAGTTACGCGATCGCGAAATTTAA
Upstream 100 bases:
>100_bases TCCAACGTTGAATATTCATAAATTTTGGGAATATTAGCAATTAACGTACTTTAAGATAGCCTCAAATCCACACCCGTAAT TTCAAGGAAATTTCGCATCT
Downstream 100 bases:
>100_bases CCCACCATTTCATAGTCCCAGCAGCCAGAACCCTGACCCTGAAAAGTTTTATTAGTTTTGAATTGATATGCACCTGTTCA ACCGTGTCAAATACCGTACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MAGNFGSPSPTQPLSVGNVVSAGLRLYRSHLKDYFLLALKAYVWVLVPVYGWAKFYALTSLISRLAFGELVNQPESISSG ERFVNSRLWQFLLAMLLLLLVGIGIGLGVVILSILLGVVSAAFVGGVGQQANPATYLVFILAAFVIGIVALLGILWLVTR FYLVDLPLAVEEGIEATSAISRSWELTQGHVWRILLISFVGFLITIPIQIVVQIATSILQAAFLPLISEGNTVFALLYFV LVLVLISGSGALLIPFWQSIKAVIYYDLRSRREGLGLQLRDREI
Sequences:
>Translated_284_residues MAGNFGSPSPTQPLSVGNVVSAGLRLYRSHLKDYFLLALKAYVWVLVPVYGWAKFYALTSLISRLAFGELVNQPESISSG ERFVNSRLWQFLLAMLLLLLVGIGIGLGVVILSILLGVVSAAFVGGVGQQANPATYLVFILAAFVIGIVALLGILWLVTR FYLVDLPLAVEEGIEATSAISRSWELTQGHVWRILLISFVGFLITIPIQIVVQIATSILQAAFLPLISEGNTVFALLYFV LVLVLISGSGALLIPFWQSIKAVIYYDLRSRREGLGLQLRDREI >Mature_283_residues AGNFGSPSPTQPLSVGNVVSAGLRLYRSHLKDYFLLALKAYVWVLVPVYGWAKFYALTSLISRLAFGELVNQPESISSGE RFVNSRLWQFLLAMLLLLLVGIGIGLGVVILSILLGVVSAAFVGGVGQQANPATYLVFILAAFVIGIVALLGILWLVTRF YLVDLPLAVEEGIEATSAISRSWELTQGHVWRILLISFVGFLITIPIQIVVQIATSILQAAFLPLISEGNTVFALLYFVL VLVLISGSGALLIPFWQSIKAVIYYDLRSRREGLGLQLRDREI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31036; Mature: 30905
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGNFGSPSPTQPLSVGNVVSAGLRLYRSHLKDYFLLALKAYVWVLVPVYGWAKFYALTS CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LISRLAFGELVNQPESISSGERFVNSRLWQFLLAMLLLLLVGIGIGLGVVILSILLGVVS HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAFVGGVGQQANPATYLVFILAAFVIGIVALLGILWLVTRFYLVDLPLAVEEGIEATSAI HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHH SRSWELTQGHVWRILLISFVGFLITIPIQIVVQIATSILQAAFLPLISEGNTVFALLYFV HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LVLVLISGSGALLIPFWQSIKAVIYYDLRSRREGLGLQLRDREI HHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure AGNFGSPSPTQPLSVGNVVSAGLRLYRSHLKDYFLLALKAYVWVLVPVYGWAKFYALTS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LISRLAFGELVNQPESISSGERFVNSRLWQFLLAMLLLLLVGIGIGLGVVILSILLGVVS HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAFVGGVGQQANPATYLVFILAAFVIGIVALLGILWLVTRFYLVDLPLAVEEGIEATSAI HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHH SRSWELTQGHVWRILLISFVGFLITIPIQIVVQIATSILQAAFLPLISEGNTVFALLYFV HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LVLVLISGSGALLIPFWQSIKAVIYYDLRSRREGLGLQLRDREI HHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA