Click here to switch to the map view.

The map label for this gene is 17229298

Identifier: 17229298

GI number: 17229298

Start: 2171316

End: 2172101

Strand: Reverse

Name: 17229298

Synonym: all1806

Alternate gene names: NA

Gene position: 2172101-2171316 (Counterclockwise)

Preceding gene: 17229299

Following gene: 17229296

Centisome position: 33.87

GC content: 41.98

Gene sequence:

>786_bases
ATGCACCTGTTCAACCGTGTCAAATACCGTACACCAGAAAGTGTAGAGATAGAGTTTACCGTTGCTGGTATCGGTAATCG
TGCCTGGGCTTTAATCATTGATTATCTGATTTTAGCGGCGACTTGGGTAGTATTCTTCCTTGTCTGGGCTTTTATTTCCG
CGCAGTTAGTAGATTGGTGGACAGAAACTTTCGGTTCGGCGACGGCTGTTTGGCTAGTGGCGATCGCATTTATTGTTAGC
TTTGTTATGTATACGGGCTACTTTGTCTTTTTTGAGACTTTATGGCAAGGCCAAACCCCCGGTAAACGCTCAGTTAAAAT
TCGCGTAGTTCGAGATGATGGCAGACCAGTTGGTTTACAACAAGCTACTCTGCGAGCTTTATTGCGACCTTTCGATGAGT
TTCTGTTTATTGGGGCTTTTTTAATTATTTTTAATAGTAAAGAAAAGCGTCTTGGTGATTTAGCCGCAGGCACAATTGTG
ATTCAAACAGAAACACCAACTACTTCAGCCACTTTCACTATTTCCGAACAAGCCAAGTCACTCTATGCAGAATTATCACA
AATTACTGACTTATCAAAATTATTACCCGATGACTTTGCTGTTATTCATCAATATTTACAGCGACGTAGTGTAATGGGTA
ACAAAGCCAGAAGCGCTTTATCCATCAAACTAGCCGAACAAGTGCAAGCAATTCTGCACTTAGAAACGTTACCGGCAACT
GTTACCTCTGATGTTTTTTTAGAAGCTGTTTACCTCGCTTATCGTGGAGTGGGAAGTGGGGAGTAG

Upstream 100 bases:

>100_bases
TTAGGCTTGCAGTTACGCGATCGCGAAATTTAACCCACCATTTCATAGTCCCAGCAGCCAGAACCCTGACCCTGAAAAGT
TTTATTAGTTTTGAATTGAT

Downstream 100 bases:

>100_bases
GAAGTGATGAATCAAGAATACTCAGTAACATATTCATCCCCCTGCCCCCTGCCTCTTATCTCCTCACCCAGCTTTCAAGT
TGAAAGTGATGATTTGTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: RDD Domain-Containing Protein; RDD Family Protein; Transmembrane Protein; Integral Membrane Protein; Rdd Domain Containing Protein; Rdd Family Protein; RDD Domain Protein; Rdd Domain Protein

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MHLFNRVKYRTPESVEIEFTVAGIGNRAWALIIDYLILAATWVVFFLVWAFISAQLVDWWTETFGSATAVWLVAIAFIVS
FVMYTGYFVFFETLWQGQTPGKRSVKIRVVRDDGRPVGLQQATLRALLRPFDEFLFIGAFLIIFNSKEKRLGDLAAGTIV
IQTETPTTSATFTISEQAKSLYAELSQITDLSKLLPDDFAVIHQYLQRRSVMGNKARSALSIKLAEQVQAILHLETLPAT
VTSDVFLEAVYLAYRGVGSGE

Sequences:

>Translated_261_residues
MHLFNRVKYRTPESVEIEFTVAGIGNRAWALIIDYLILAATWVVFFLVWAFISAQLVDWWTETFGSATAVWLVAIAFIVS
FVMYTGYFVFFETLWQGQTPGKRSVKIRVVRDDGRPVGLQQATLRALLRPFDEFLFIGAFLIIFNSKEKRLGDLAAGTIV
IQTETPTTSATFTISEQAKSLYAELSQITDLSKLLPDDFAVIHQYLQRRSVMGNKARSALSIKLAEQVQAILHLETLPAT
VTSDVFLEAVYLAYRGVGSGE
>Mature_261_residues
MHLFNRVKYRTPESVEIEFTVAGIGNRAWALIIDYLILAATWVVFFLVWAFISAQLVDWWTETFGSATAVWLVAIAFIVS
FVMYTGYFVFFETLWQGQTPGKRSVKIRVVRDDGRPVGLQQATLRALLRPFDEFLFIGAFLIIFNSKEKRLGDLAAGTIV
IQTETPTTSATFTISEQAKSLYAELSQITDLSKLLPDDFAVIHQYLQRRSVMGNKARSALSIKLAEQVQAILHLETLPAT
VTSDVFLEAVYLAYRGVGSGE

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29303; Mature: 29303

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLFNRVKYRTPESVEIEFTVAGIGNRAWALIIDYLILAATWVVFFLVWAFISAQLVDWW
CCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TETFGSATAVWLVAIAFIVSFVMYTGYFVFFETLWQGQTPGKRSVKIRVVRDDGRPVGLQ
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHH
QATLRALLRPFDEFLFIGAFLIIFNSKEKRLGDLAAGTIVIQTETPTTSATFTISEQAKS
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCEEEEEECCCCCCEEEEEHHHHHH
LYAELSQITDLSKLLPDDFAVIHQYLQRRSVMGNKARSALSIKLAEQVQAILHLETLPAT
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCH
VTSDVFLEAVYLAYRGVGSGE
HHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MHLFNRVKYRTPESVEIEFTVAGIGNRAWALIIDYLILAATWVVFFLVWAFISAQLVDWW
CCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TETFGSATAVWLVAIAFIVSFVMYTGYFVFFETLWQGQTPGKRSVKIRVVRDDGRPVGLQ
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHH
QATLRALLRPFDEFLFIGAFLIIFNSKEKRLGDLAAGTIVIQTETPTTSATFTISEQAKS
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCEEEEEECCCCCCEEEEEHHHHHH
LYAELSQITDLSKLLPDDFAVIHQYLQRRSVMGNKARSALSIKLAEQVQAILHLETLPAT
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCH
VTSDVFLEAVYLAYRGVGSGE
HHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA