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The map label for this gene is yraN [C]

Identifier: 17229288

GI number: 17229288

Start: 2157748

End: 2158170

Strand: Direct

Name: yraN [C]

Synonym: alr1796

Alternate gene names: 17229288

Gene position: 2157748-2158170 (Clockwise)

Preceding gene: 17229286

Following gene: 17229290

Centisome position: 33.64

GC content: 38.53

Gene sequence:

>423_bases
ATGTCACATTTAAATATTGCCAACTTAGGCGAAGACTTTGTAGCCCAATGGTTACAATCTACGGGTTGGATAATTTTACA
TCGTCAATTTTCCTGCCGTTGGGGCGAAATTGATATCATTGCCCAACACACTAGAAATAATCAAGAATCTATACTAGCAT
TTGTCGAAGTTAAAACTCGTAGTCCAGGTAATTGGGATGATGGAGGACGAGGTGCAATTACGCTGAAAAAGCAAGCAAAA
ATTGAGCGGACGGCAAAAATATTTTTAGCCAAATATCCTGATAAAGCTGAGTATATCTGTCGCTTCGATGTGGCGATTGT
TGCTTATCAGGGAATTTCCCAGCAGGATCATGCTGCAATAGGAGAATATAAATTTCAGTTACAAGAATATATTCCGGCGG
CTTTTGACTGTCTAATTTATTAA

Upstream 100 bases:

>100_bases
CATATAGCAGCAGTACTAGTTACCTACTCTATATTCCTAGCCCAAGTGATTAACTTGGACTGCAACTTGGTATAAAAACT
CTAGATTACTCGATTATTTT

Downstream 100 bases:

>100_bases
AGGAACACCAAACAATAAATTATCCGAAATTGATGGTTTGGTAGGGTGTGTCAGTGCGATAGAACCTAACTATACTCAGA
AATTATTCATACTGACGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MSHLNIANLGEDFVAQWLQSTGWIILHRQFSCRWGEIDIIAQHTRNNQESILAFVEVKTRSPGNWDDGGRGAITLKKQAK
IERTAKIFLAKYPDKAEYICRFDVAIVAYQGISQQDHAAIGEYKFQLQEYIPAAFDCLIY

Sequences:

>Translated_140_residues
MSHLNIANLGEDFVAQWLQSTGWIILHRQFSCRWGEIDIIAQHTRNNQESILAFVEVKTRSPGNWDDGGRGAITLKKQAK
IERTAKIFLAKYPDKAEYICRFDVAIVAYQGISQQDHAAIGEYKFQLQEYIPAAFDCLIY
>Mature_139_residues
SHLNIANLGEDFVAQWLQSTGWIILHRQFSCRWGEIDIIAQHTRNNQESILAFVEVKTRSPGNWDDGGRGAITLKKQAKI
ERTAKIFLAKYPDKAEYICRFDVAIVAYQGISQQDHAAIGEYKFQLQEYIPAAFDCLIY

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 16037; Mature: 15906

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHLNIANLGEDFVAQWLQSTGWIILHRQFSCRWGEIDIIAQHTRNNQESILAFVEVKTR
CCCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEEEEEC
SPGNWDDGGRGAITLKKQAKIERTAKIFLAKYPDKAEYICRFDVAIVAYQGISQQDHAAI
CCCCCCCCCCEEEEEHHHHHHHHHHEEEEEECCCCCCEEEEEHEEEEEECCCCCCCCHHH
GEYKFQLQEYIPAAFDCLIY
HHHHHHHHHHCCHHHHEECC
>Mature Secondary Structure 
SHLNIANLGEDFVAQWLQSTGWIILHRQFSCRWGEIDIIAQHTRNNQESILAFVEVKTR
CCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEEEEEC
SPGNWDDGGRGAITLKKQAKIERTAKIFLAKYPDKAEYICRFDVAIVAYQGISQQDHAAI
CCCCCCCCCCEEEEEHHHHHHHHHHEEEEEECCCCCCEEEEEHEEEEEECCCCCCCCHHH
GEYKFQLQEYIPAAFDCLIY
HHHHHHHHHHCCHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA