| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229286
Identifier: 17229286
GI number: 17229286
Start: 2156868
End: 2157302
Strand: Direct
Name: 17229286
Synonym: alr1794
Alternate gene names: NA
Gene position: 2156868-2157302 (Clockwise)
Preceding gene: 17229285
Following gene: 17229288
Centisome position: 33.63
GC content: 39.31
Gene sequence:
>435_bases ATGACTCCAACTTTATTTGGTCGTTGGCAAACCAGACTGTTATTACTTGCTACCGTCGGTGTATTAGTATCCTCGCCTTT TGCAATGGGTTTAATTGGCCCCGGTGCTAATTCTGTTTATTTTTGGATACTAGCTTATGTCGCTATTTTTGGTTTAGGGT GGGATGTCCTTTATAACTATCTACAAAAGTTCCGTTGGGATCGGGATTGGCCGGCAGCTTATCAACTTATGGCTGGGATT TGGGAATTAATATTTGTTTTTTGTGGAGCTAAAATTTTTGGCTTCTTACCATTACCTATTCCGAAAGAAGTACTACCAGC AGATACTTTTTTAATACACTACAGTGTGGTTTGGTTAGCAGTTTTTATTGCTTCCCAAAGCATTATGAGAATTATATTTC CCCGTTGGCGTTTTCGAGGTGGACAATGGCTTTAA
Upstream 100 bases:
>100_bases AAATTGTACATAAAATTCGTTATTACTAATTAGTAAGTGAGCGAGAAAAATTCAAATTACATGAGCAAAATATAAATTAT CTTTCGTACTCATTACTCCT
Downstream 100 bases:
>100_bases GAATTTAAAAGTGAAACAGATGATTATTAGGGTGGAATGCCCAGTGTATATCTTCTTGGTGGGCATTGCCCACCCTACAA TTGAGATAAATTTATGACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MTPTLFGRWQTRLLLLATVGVLVSSPFAMGLIGPGANSVYFWILAYVAIFGLGWDVLYNYLQKFRWDRDWPAAYQLMAGI WELIFVFCGAKIFGFLPLPIPKEVLPADTFLIHYSVVWLAVFIASQSIMRIIFPRWRFRGGQWL
Sequences:
>Translated_144_residues MTPTLFGRWQTRLLLLATVGVLVSSPFAMGLIGPGANSVYFWILAYVAIFGLGWDVLYNYLQKFRWDRDWPAAYQLMAGI WELIFVFCGAKIFGFLPLPIPKEVLPADTFLIHYSVVWLAVFIASQSIMRIIFPRWRFRGGQWL >Mature_143_residues TPTLFGRWQTRLLLLATVGVLVSSPFAMGLIGPGANSVYFWILAYVAIFGLGWDVLYNYLQKFRWDRDWPAAYQLMAGIW ELIFVFCGAKIFGFLPLPIPKEVLPADTFLIHYSVVWLAVFIASQSIMRIIFPRWRFRGGQWL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16611; Mature: 16480
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTLFGRWQTRLLLLATVGVLVSSPFAMGLIGPGANSVYFWILAYVAIFGLGWDVLYNY CCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCHHHHHHHHHHHHHHCCHHHHHHH LQKFRWDRDWPAAYQLMAGIWELIFVFCGAKIFGFLPLPIPKEVLPADTFLIHYSVVWLA HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHH VFIASQSIMRIIFPRWRFRGGQWL HHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TPTLFGRWQTRLLLLATVGVLVSSPFAMGLIGPGANSVYFWILAYVAIFGLGWDVLYNY CCCCHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCHHHHHHHHHHHHHHCCHHHHHHH LQKFRWDRDWPAAYQLMAGIWELIFVFCGAKIFGFLPLPIPKEVLPADTFLIHYSVVWLA HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHH VFIASQSIMRIIFPRWRFRGGQWL HHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA