Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17229253

Identifier: 17229253

GI number: 17229253

Start: 2116428

End: 2117180

Strand: Reverse

Name: 17229253

Synonym: all1761

Alternate gene names: NA

Gene position: 2117180-2116428 (Counterclockwise)

Preceding gene: 17229254

Following gene: 17229252

Centisome position: 33.01

GC content: 41.17

Gene sequence:

>753_bases
ATGAGTACCAATAATGAAAGTTCCACTATCCTAAAAAAAGAGAATAAGGGCTTGGGAATTGACCGCCTAAAGCAGGACTT
AAAGAATGACCTAATTGCTGGCTTGTTAGTAGTAATTCCCCTGGCAACCACTATCTGGTTAACAATTACCATTGCTAATT
GGGTAATTGACTTTCTCACTCAAGTGCCTAAACAACTTAACCCTTTTGATGGATTACATCCCATAGTAGTAAATATACTT
AATTTTGCAGTAGGGCTAGCTGTACCTCTACTAAGTATTTTGATTATTGGGTTAATGGCTAGGAATATTGCAGGAAGATG
GTTGTTGGATTTTGGTGAACGATTATTACAGGCAATTCCTTTAGCTGGGCAGGTGTATAAAACCCTCAAGCAGCTTTTGG
AAACACTACTAAAAGACTCCAATGGGAAATTTCGGAGAGTCATTTTAATAGAATATCCCCGTCGGGGAATATGGGCGATC
GCCTTTGTTACAGGTGTGATTAGTAGTGAAATTCAATCTCAAATGCCTCGTCCAATGTTGAGTGTGTTTATTCCCACCAC
ACCAAACCCGACTACAGGCTGGTACGCTGTAGTCCCAGAAGACGAAGTAGTTAACCTCTCCATGTCCGTAGAAGATGCTT
TCAAAGTTGTAGTCTCCGGCGGCATTGTTGCACCGAATCCCTGTCTACCCGACCTAGACTTAATCCAAGAGCATAAAATA
GAGAAATCCCTGCAAGAGATGAAGCAGATATAG

Upstream 100 bases:

>100_bases
GGAAATAGCTTGGCTACAATTCCAATACTTGTCTTTGAGACTAAGGTTTGGAGTACAAAGGCTACACGTTATATCTGATT
AATTAGACAAATTTACTGGA

Downstream 100 bases:

>100_bases
AACAAGAGGGATAGGAAAGAAAATTCTGACTCTATTACTGTTACCGGCAACTCAGCACTTACCGCCAAATAAATCTAAAA
AAATCCGGTAACTTCGTACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MSTNNESSTILKKENKGLGIDRLKQDLKNDLIAGLLVVIPLATTIWLTITIANWVIDFLTQVPKQLNPFDGLHPIVVNIL
NFAVGLAVPLLSILIIGLMARNIAGRWLLDFGERLLQAIPLAGQVYKTLKQLLETLLKDSNGKFRRVILIEYPRRGIWAI
AFVTGVISSEIQSQMPRPMLSVFIPTTPNPTTGWYAVVPEDEVVNLSMSVEDAFKVVVSGGIVAPNPCLPDLDLIQEHKI
EKSLQEMKQI

Sequences:

>Translated_250_residues
MSTNNESSTILKKENKGLGIDRLKQDLKNDLIAGLLVVIPLATTIWLTITIANWVIDFLTQVPKQLNPFDGLHPIVVNIL
NFAVGLAVPLLSILIIGLMARNIAGRWLLDFGERLLQAIPLAGQVYKTLKQLLETLLKDSNGKFRRVILIEYPRRGIWAI
AFVTGVISSEIQSQMPRPMLSVFIPTTPNPTTGWYAVVPEDEVVNLSMSVEDAFKVVVSGGIVAPNPCLPDLDLIQEHKI
EKSLQEMKQI
>Mature_249_residues
STNNESSTILKKENKGLGIDRLKQDLKNDLIAGLLVVIPLATTIWLTITIANWVIDFLTQVPKQLNPFDGLHPIVVNILN
FAVGLAVPLLSILIIGLMARNIAGRWLLDFGERLLQAIPLAGQVYKTLKQLLETLLKDSNGKFRRVILIEYPRRGIWAIA
FVTGVISSEIQSQMPRPMLSVFIPTTPNPTTGWYAVVPEDEVVNLSMSVEDAFKVVVSGGIVAPNPCLPDLDLIQEHKIE
KSLQEMKQI

Specific function: Unknown

COG id: COG2928

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27725; Mature: 27594

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTNNESSTILKKENKGLGIDRLKQDLKNDLIAGLLVVIPLATTIWLTITIANWVIDFLT
CCCCCCCHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVPKQLNPFDGLHPIVVNILNFAVGLAVPLLSILIIGLMARNIAGRWLLDFGERLLQAIP
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LAGQVYKTLKQLLETLLKDSNGKFRRVILIEYPRRGIWAIAFVTGVISSEIQSQMPRPML
CCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC
SVFIPTTPNPTTGWYAVVPEDEVVNLSMSVEDAFKVVVSGGIVAPNPCLPDLDLIQEHKI
EEEECCCCCCCCCEEEECCCCCEEEEEECHHHHHHHHHCCCEECCCCCCCCHHHHHHHHH
EKSLQEMKQI
HHHHHHHHCC
>Mature Secondary Structure 
STNNESSTILKKENKGLGIDRLKQDLKNDLIAGLLVVIPLATTIWLTITIANWVIDFLT
CCCCCCHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVPKQLNPFDGLHPIVVNILNFAVGLAVPLLSILIIGLMARNIAGRWLLDFGERLLQAIP
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LAGQVYKTLKQLLETLLKDSNGKFRRVILIEYPRRGIWAIAFVTGVISSEIQSQMPRPML
CCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC
SVFIPTTPNPTTGWYAVVPEDEVVNLSMSVEDAFKVVVSGGIVAPNPCLPDLDLIQEHKI
EEEECCCCCCCCCEEEECCCCCEEEEEECHHHHHHHHHCCCEECCCCCCCCHHHHHHHHH
EKSLQEMKQI
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA