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The map label for this gene is 17229190

Identifier: 17229190

GI number: 17229190

Start: 2037306

End: 2037935

Strand: Direct

Name: 17229190

Synonym: alr1698

Alternate gene names: NA

Gene position: 2037306-2037935 (Clockwise)

Preceding gene: 17229182

Following gene: 17229192

Centisome position: 31.76

GC content: 44.44

Gene sequence:

>630_bases
GTGCTAACAGCTTTTACCGCAGGTTTATTACTAATTACAGTTTCAGAACTGGGAGATAAAACTTTCTTCATCGCCATGAT
CTTGGCAATGCACCATTCCCGACGATGGGTATTTACAGGAGTGGTGGGCGCTTTAGCCGCAATGACAATACTCTCGGTAT
TATTTGGCAAAGCTGCATCTCTATTGCCACCAGTGTACATTTATTACGCTGAAATAACCTTATTTATTGCCTTTGGTCTG
AAACTGTTGTATGACGCTAGTAAGATGTCGGCGGCGGCGGATAAAGCTGAAGTGATGGAAGAGATGGAAGAGGCGAAAGC
AGCCGTAGAAAAAGCAGATTTACAGCTACCAAAACAAAAAACGCCCTTATCAATTATATTAGAAGCCTTTGTCTTGACCT
TTATGGCAGAGTGGGGCGATCGCACCCAAATAGCCACCATAGCCTTAGCCGCAGGTAATAACATTATTGGTGTCACCATA
GGAGCCATTTTAGGTCATGCCATTTGTGCGGCGATCGCTGTCATTGGGGGCAAAATGATTGCCGGGAAAATTTCTGAACG
TCAGCTTACCTTTGCCGGCGGATGCCTATTTTTGATTTTTGGTATTGTCGCCGCTATTGAAGGAGTGTAA

Upstream 100 bases:

>100_bases
CGAGACCTTCACTAAGTTCACATTTAAGATGTGGCTTGGTGGGGTCTTTTGGCATTCATCAAGCTTCACATCGGTAAACA
TTTTTCAGGAGCTTGAGAGA

Downstream 100 bases:

>100_bases
CAATTCAACATTTAAAATTCTTATCCTACTCATCAATAACCCCCTAAAAATTGGGGGTTAGAGTTTTCTTTATTGCTTCG
GGGTGCTTTCAGGAGTGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MLTAFTAGLLLITVSELGDKTFFIAMILAMHHSRRWVFTGVVGALAAMTILSVLFGKAASLLPPVYIYYAEITLFIAFGL
KLLYDASKMSAAADKAEVMEEMEEAKAAVEKADLQLPKQKTPLSIILEAFVLTFMAEWGDRTQIATIALAAGNNIIGVTI
GAILGHAICAAIAVIGGKMIAGKISERQLTFAGGCLFLIFGIVAAIEGV

Sequences:

>Translated_209_residues
MLTAFTAGLLLITVSELGDKTFFIAMILAMHHSRRWVFTGVVGALAAMTILSVLFGKAASLLPPVYIYYAEITLFIAFGL
KLLYDASKMSAAADKAEVMEEMEEAKAAVEKADLQLPKQKTPLSIILEAFVLTFMAEWGDRTQIATIALAAGNNIIGVTI
GAILGHAICAAIAVIGGKMIAGKISERQLTFAGGCLFLIFGIVAAIEGV
>Mature_209_residues
MLTAFTAGLLLITVSELGDKTFFIAMILAMHHSRRWVFTGVVGALAAMTILSVLFGKAASLLPPVYIYYAEITLFIAFGL
KLLYDASKMSAAADKAEVMEEMEEAKAAVEKADLQLPKQKTPLSIILEAFVLTFMAEWGDRTQIATIALAAGNNIIGVTI
GAILGHAICAAIAVIGGKMIAGKISERQLTFAGGCLFLIFGIVAAIEGV

Specific function: Unknown

COG id: COG2119

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0016 (TC 9.B.26) family [H]

Homologues:

Organism=Homo sapiens, GI32189371, Length=226, Percent_Identity=43.8053097345133, Blast_Score=170, Evalue=7e-43,
Organism=Caenorhabditis elegans, GI17556152, Length=221, Percent_Identity=45.2488687782805, Blast_Score=170, Evalue=5e-43,
Organism=Caenorhabditis elegans, GI17556150, Length=172, Percent_Identity=42.4418604651163, Blast_Score=118, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6319664, Length=232, Percent_Identity=34.9137931034483, Blast_Score=120, Evalue=2e-28,
Organism=Drosophila melanogaster, GI281361794, Length=225, Percent_Identity=43.5555555555556, Blast_Score=186, Evalue=7e-48,
Organism=Drosophila melanogaster, GI24647003, Length=225, Percent_Identity=43.5555555555556, Blast_Score=186, Evalue=7e-48,
Organism=Drosophila melanogaster, GI21357589, Length=225, Percent_Identity=43.5555555555556, Blast_Score=186, Evalue=7e-48,
Organism=Drosophila melanogaster, GI281361792, Length=161, Percent_Identity=39.7515527950311, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI281361790, Length=161, Percent_Identity=39.7515527950311, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI281361796, Length=82, Percent_Identity=51.219512195122, Blast_Score=93, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001727 [H]

Pfam domain/function: PF01169 UPF0016 [H]

EC number: NA

Molecular weight: Translated: 22143; Mature: 22143

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS01214 UPF0016

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTAFTAGLLLITVSELGDKTFFIAMILAMHHSRRWVFTGVVGALAAMTILSVLFGKAAS
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLPPVYIYYAEITLFIAFGLKLLYDASKMSAAADKAEVMEEMEEAKAAVEKADLQLPKQK
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TPLSIILEAFVLTFMAEWGDRTQIATIALAAGNNIIGVTIGAILGHAICAAIAVIGGKMI
CCHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
AGKISERQLTFAGGCLFLIFGIVAAIEGV
CCCCCCCEEHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLTAFTAGLLLITVSELGDKTFFIAMILAMHHSRRWVFTGVVGALAAMTILSVLFGKAAS
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLPPVYIYYAEITLFIAFGLKLLYDASKMSAAADKAEVMEEMEEAKAAVEKADLQLPKQK
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TPLSIILEAFVLTFMAEWGDRTQIATIALAAGNNIIGVTIGAILGHAICAAIAVIGGKMI
CCHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
AGKISERQLTFAGGCLFLIFGIVAAIEGV
CCCCCCCEEHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]