| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229192
Identifier: 17229192
GI number: 17229192
Start: 2039242
End: 2040261
Strand: Direct
Name: 17229192
Synonym: alr1700
Alternate gene names: NA
Gene position: 2039242-2040261 (Clockwise)
Preceding gene: 17229190
Following gene: 17229197
Centisome position: 31.79
GC content: 49.61
Gene sequence:
>1020_bases GTGTCTCCGCCGCAAGGAGTTTTTATGACTTCCGACCTGATGCCTTCGCCTGAATCTTCCAACTCTTTTGCCTCAGATCA GCCTCAAACTAACATAGAGGCGGCCGCTAATATTCATATAGCAGCACCCCAGTCCTCTAAGCCTGAAAATTCGTCACTCA ACACTAGTGAGAATGCCACAGATGAGAACTTAGCCGATCGCCAGCAACCAATTCCACCTCCCAGTGAACCAATGCAATAC AGAGCCATTGGTTTAGTCCGGGGTCGTTACCGTGCCAGCGATGAACAATTTACCCAAGGTATCTTACTGACCACAGATGG CGTAGAACTCAACGCCGTCCTCCTGGGTCGGATTATGAGCCTAGTCAAAAATCATCTAGACCTAGAACAAGACCATTTGT GGGTAGTTTATCCCCGCACAAGGCAAGAAAACGACACTCTGCATATCCAAATCGTCGGAGTTTGGGAACCAGAAAATCTG GCTAAAAATTCGACAGAAGAAGATGAGCAAGATGCGCTTTCACAAGAAACCATACCCGAAGAGCCAGAAGCAGCTACAAA ATCCCCAGCGCCTTCATCCAATATTCCTGATGGTGGTTTTTCCGTCCGTGGAGAAGTAGTTTATCAGTCTTTCGATGCTA AAAGCTTAGTTGTTAAAATTAAGCAGGCTCCACGTAAACCAACTGATAAGCCCAAATATTTCAAGTTGAAACTGCGGGGT GTGTTAACCACCAAAGCGGTAGGGAAGTTTTGGGACTTCCAAGCCAAGCGAGAAGGTGACGTTCTGGTAGTACAAACGGC AGAAGCGATTGCTGACTTGCCCAAAAAACGCCGACCACCGTTTAAAGGCGGCGGCGGCGGTGGCCCCCGTGGTGGTTTCA GAAAACCATTCCCCCCCAGAAGACCAGGAGAAACGCCCCGCCCAATCAAGAAAGTCGGTGGCGAAACCTCTGCGGTTTCC AAACCCCAACCGAAAGCACCGGTTCCCAAGCCGGTGAAGAAACCCAAGCCGACGGAGTAG
Upstream 100 bases:
>100_bases TATAGAGCGTTTTCGTGTGATTTTGTGAAAAGCCAATATACTTTCATCAGCCACACAAGCGCTCTTTCTCGATGCTTTAG TAAAATCCCATAATTGGGAT
Downstream 100 bases:
>100_bases GAAGGGGGCAGGGAAGTAGGGAGCAGGGAAGGCTGGGGAGTAGGGGGACTGGGGAGAAATATTAATCCCCAATCCCCAAT CCCCAATCCCTAATCCCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MSPPQGVFMTSDLMPSPESSNSFASDQPQTNIEAAANIHIAAPQSSKPENSSLNTSENATDENLADRQQPIPPPSEPMQY RAIGLVRGRYRASDEQFTQGILLTTDGVELNAVLLGRIMSLVKNHLDLEQDHLWVVYPRTRQENDTLHIQIVGVWEPENL AKNSTEEDEQDALSQETIPEEPEAATKSPAPSSNIPDGGFSVRGEVVYQSFDAKSLVVKIKQAPRKPTDKPKYFKLKLRG VLTTKAVGKFWDFQAKREGDVLVVQTAEAIADLPKKRRPPFKGGGGGGPRGGFRKPFPPRRPGETPRPIKKVGGETSAVS KPQPKAPVPKPVKKPKPTE
Sequences:
>Translated_339_residues MSPPQGVFMTSDLMPSPESSNSFASDQPQTNIEAAANIHIAAPQSSKPENSSLNTSENATDENLADRQQPIPPPSEPMQY RAIGLVRGRYRASDEQFTQGILLTTDGVELNAVLLGRIMSLVKNHLDLEQDHLWVVYPRTRQENDTLHIQIVGVWEPENL AKNSTEEDEQDALSQETIPEEPEAATKSPAPSSNIPDGGFSVRGEVVYQSFDAKSLVVKIKQAPRKPTDKPKYFKLKLRG VLTTKAVGKFWDFQAKREGDVLVVQTAEAIADLPKKRRPPFKGGGGGGPRGGFRKPFPPRRPGETPRPIKKVGGETSAVS KPQPKAPVPKPVKKPKPTE >Mature_338_residues SPPQGVFMTSDLMPSPESSNSFASDQPQTNIEAAANIHIAAPQSSKPENSSLNTSENATDENLADRQQPIPPPSEPMQYR AIGLVRGRYRASDEQFTQGILLTTDGVELNAVLLGRIMSLVKNHLDLEQDHLWVVYPRTRQENDTLHIQIVGVWEPENLA KNSTEEDEQDALSQETIPEEPEAATKSPAPSSNIPDGGFSVRGEVVYQSFDAKSLVVKIKQAPRKPTDKPKYFKLKLRGV LTTKAVGKFWDFQAKREGDVLVVQTAEAIADLPKKRRPPFKGGGGGGPRGGFRKPFPPRRPGETPRPIKKVGGETSAVSK PQPKAPVPKPVKKPKPTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37132; Mature: 37001
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPPQGVFMTSDLMPSPESSNSFASDQPQTNIEAAANIHIAAPQSSKPENSSLNTSENAT CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC DENLADRQQPIPPPSEPMQYRAIGLVRGRYRASDEQFTQGILLTTDGVELNAVLLGRIMS CHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHCCEEEEECCCEEHHHHHHHHHH LVKNHLDLEQDHLWVVYPRTRQENDTLHIQIVGVWEPENLAKNSTEEDEQDALSQETIPE HHHHHCCCCCCCEEEEECCCCCCCCEEEEEEEEEECCHHHHCCCCCCHHHHHHHHHCCCC EPEAATKSPAPSSNIPDGGFSVRGEVVYQSFDAKSLVVKIKQAPRKPTDKPKYFKLKLRG CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEHEEHHCCCCCCCCCCEEEEEEEE VLTTKAVGKFWDFQAKREGDVLVVQTAEAIADLPKKRRPPFKGGGGGGPRGGFRKPFPPR EHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC RPGETPRPIKKVGGETSAVSKPQPKAPVPKPVKKPKPTE CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SPPQGVFMTSDLMPSPESSNSFASDQPQTNIEAAANIHIAAPQSSKPENSSLNTSENAT CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC DENLADRQQPIPPPSEPMQYRAIGLVRGRYRASDEQFTQGILLTTDGVELNAVLLGRIMS CHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHCCEEEEECCCEEHHHHHHHHHH LVKNHLDLEQDHLWVVYPRTRQENDTLHIQIVGVWEPENLAKNSTEEDEQDALSQETIPE HHHHHCCCCCCCEEEEECCCCCCCCEEEEEEEEEECCHHHHCCCCCCHHHHHHHHHCCCC EPEAATKSPAPSSNIPDGGFSVRGEVVYQSFDAKSLVVKIKQAPRKPTDKPKYFKLKLRG CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEHEEHHCCCCCCCCCCEEEEEEEE VLTTKAVGKFWDFQAKREGDVLVVQTAEAIADLPKKRRPPFKGGGGGGPRGGFRKPFPPR EHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC RPGETPRPIKKVGGETSAVSKPQPKAPVPKPVKKPKPTE CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA