| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is sdrD [H]
Identifier: 17229188
GI number: 17229188
Start: 2029592
End: 2035591
Strand: Reverse
Name: sdrD [H]
Synonym: all1696
Alternate gene names: 17229188
Gene position: 2035591-2029592 (Counterclockwise)
Preceding gene: 17229189
Following gene: 17229187
Centisome position: 31.74
GC content: 45.27
Gene sequence:
>6000_bases ATGTCTTTAACTGATGACCTGCTGCAAGCTTTAAAGTTAACATTACCGGACAACAACGTAAACATCGTAGTTGCTTATCC TGGTTCTGGTGGTGATGGACCAAGCTACGTAGACCTTACAATCTCCAACGGTAATTTCCTCAATGGACTGTATGACACCT ATTGCATTGATGCGAATCAAACTATTGTTCCAGGGCAATCCTACCAAGCGCAAGTTTATTCTAGCTATAATGACCCTCTG CCAACAGGGATAATTGATAAACCCGAAAACCTAGATGAGATTAACTGGTTAATTAACCAGAAATTCGTAGGCAAACAATC TTCAGGGGGTCTCGGTGCCTATACCTCCGGTGATATACAGGTAGCCATCTGGACTCTGCTTGAGAACACAGTTCCTTCCA ACATATTAGGTACAGTAGGCGCATACAACCAAAACCGAGCCAATCAGATTGTTGAAGCAGCCTTTCAAAATGGTGGAGGC TTTGTACCTGGTATCAGCCAAGATGGCATACCTCAAGATATCGGAATTATTGTTGTTCCTGTTAACCAAACAGGAACTAA TATTGCACAAAGTACCATTAATATTCTCAAGACAGCTGCTTTGGGTGATTTTGTCTGGGAAGACCTCAATGCTAATGGCG TTCAGGATGCCAATGAAGCGGGTGTAGAAGGTGTTACTGTTACCCTCACTGGTGGTGGCAAAGATGGTGTCATCGGTACA GCAGATGACACTAATGTCACCACAACCACAGATGCCAATGGTTCTTATCTATTTCCACTTCTTTTGCCTGGTGTAGAGTA CAAAGTTACCTTTAGCAATCTACCAACAGGTTTTGTCTTTACACAGTCCAATCAAGGTAATGATACAACCGATTCTGATG CTGACCCACTCACCGGTCAGGCACAAATCATCGAGCTGAATCCAAATGAGTTCAATCGCACTATTGATGCAGGTATATAT AGGAAGGCAAGTTTAGGAGACTTCGTATTCAAAGATGCCAACAACAACGGCATTCAAGATGCAGGAGAAGTTGGAGTTGG TCAAGTCACAGTCGAATTAATCAACCCAACAAATGGGGATGTCATCGCCACAACCACAACAAATAGCAGTGGTGGCTATC AATTCAGTGGTTTAACCCCAGGTAATTACCAAGTCAGATTCACAGCCCCCACAGGCTACATCTTCTCCACCGCCAACCAA GGCAGCAACGACGAATTAGACAGTGATGCCAACCCCAGCACAGGTTTAACCCAAACACTCACCCTGACATCAGGAGAATT CAACGGGACACTGGATGCAGGTTTAGTACCCCTAGCTAGTTTGGGTAATTTCGTCTTTGAAGACAAAAATGCCAACGGCA TTCAAGATGCAGGGGAAACAGGTATTGGCAATGCCACAGTTAACCTCTTAGATGCAGCCGAGAATATCATCGCCACAGCC ACAACAGATGATAATGGACTGTACTCATTCACCAACCTGCGACCAGGAGATTACAAAGTCCAATTTGTACAACCCAATGG CTTCAACGGTGTTAGTCCGCAGAATGTAGGTGGGAATGATGCCATTGATAGTGATGGGTTAGTTTCTGATATCGTTAACC TATCGCCAGGAGAGAATGACACCACAGTTGATGCTGGGTTCTACAAAACCGCTTCATTAGGAGACTTCGTATTCAAAGAT GCCAACAACAACGGCATTCAAGATGCAGGAGAAGTTGGAGTTGGTCAAGTCACAGTCGAATTAATCAACCCAACAAATGG GGATGTCATCGCCACAACCACAACAAATAGCAGTGGTGGCTATCAATTCAGTGGTTTAACCCCAGGTAATTACCAAGTCA GATTCACAGCCCCCACAGGCTACATCTTCTCCACCGCCAACCAAGGCAGCAACGACGAATTAGACAGTGATGCCAACCCC AGCACAGGTTTAACCCAAACACTCACCCTGGCATCAGGAGAATTCAACGGGACACTGGATGCAGGTTTAGTACCCCTAGC TAGTTTGGGTAATTTTGTCTTTGAAGACAAGAATGCAAATGGAATTCAAGATGCCGGAGAAACAGGTATTGGCGATGCCA CAGTCAAGCTCTTGGATACATCCGGAAATGTCATAGCCACCACCACAACAGATGGTAATGGATTGTATTCCTTTACCAAC CTGCAACCAGGAGACTACAAAGTCCAGTTTATTCAGCCCAGTGGCTTTGATGGTATCAGTCCCAAGAATGTAGGTGGGAA TGATGCCATTGATAGTGATGGATTAATCTCCGATGTAGTTAACTTGTCTCCTGGAGAAAATGACACCACTGTTGATGCCG GCTTCTATCAAACCGCTTCATTAGGAGACTTCGTATTCAACGATGTTAACAACAATGGCATTCAAGATGCGGGAGAAATT GGTGTAGGGGGAGTCACAGTCGAACTCATCAACCCAGCGAATGGGGATGTCATAGCCACAACCACAACAGATGCAAATGG TGGCTATGGATTCAGTGGCTTAACCCCTGGAGAATACCAAGTTAAATTCACCGCCCCAGCAGGTTACAACTTCAGCCTTG CCAACCAAGGAAACAATGATGCATTAGATAGTGATGCCAACGTCAGCACAGGTATCACCCAAACACTCACCCTGGCATCA GGAGAATTCAACGGGACACTGGATGCAGGTTTAGTACCCCTAGCTAGTTTGGGTAATTTTGTCTTTGAAGACAAGAATGC AAATGGAATTCAAGATGCCGGAGAAACAGGTATTGGCGATGCCACAGTCAAGCTCTTGGATACATCCGGAAATGTCATAG CCACCACCACAACAGATGGTAATGGATTGTATTCCTTTACCAACCTGCGACCAGGAGATTACAAAGTCCAGTTTGTACAA CCCAATGGCTTCAACGGTGTTAGTCCGCAGAATGTAGGTGGGAATGATGCCATTGATAGTGATGGATTAATCTCCGATGT AGTTAACCTATCGCCAGGAGAGAATGACACCACAGTTGATGCTGGGTTCTACAAAACCGCTTCATTAGGAGACTTCGTAT TCAACGATGTTAACAACAACGGCATTCAAGATGCGGGAGAAGTTGGTGTAGCAGGTGTAAGCGTTACCCTCACTGGTGGC GGTGCAGATGGCATTATCAATGGTATTGGCGATACTACCGTTACCACAACTACTAATGCCGGTGGCAATTACAATTTTGC CGAACTCACACCTGGTCAACAATATCAAGTCGGATTCTCTGGTCTACCAGCAGGATTTCAGTTTACTCAAGCTAATGTCG GCGCTAATGATGTTGTAGATTCTGATGCTAATCCCAGCACTGGCAAAACTCAGGTTGTCACCCTTGTCTCTGGTGAAAAT AATCTCACTTTGGATGCGGGAATATACCAAAATGCTGGTGACTTATCAATCACTAAAACAGATGGTTTAACAAATGTCAC CCCAGGACAGCAGATAACCTATACCATCGTGGCGCGAAACAATGGTCTGATTACTGCTACCAATGCGCTGGTGAGTGATA TCATCCCCAGCAACTTGACCAACGTCACTTGGACAAGCGTGGCCAGTGGAGGTGCAACAGACAACCAAGCCAGTGGTACA GGCAACATCAATGATCACGTCACCCTGACAGGGGGTAGCAGCATTACCTACACAGTCACAGGAACGGTAGTTAGTAATGC AGCATCCACAGGTAGTTCGACCAGATTTGACTTTGATGGCAATAGTCCGTTGGATGGGACAGATGGCAATACACGCACAT TCACCCAAAACGGAATTACGGTCACAGCTAGAGCCTTTAGCCGTGTTGATGGCACAAATGGTGCTTGGAGTGCGGCTTAT CTGGGTAGCTATACTGGTGGCTTAGGTGTTACCGACAGTAGCGAAGGAAATGGCGGTAACAACACTCATGTGGTTGATAA CGTTGGGGGAAGGGATAACTACGTCTTATTCCAATTTTCAGAAGCAGTGGTGTTGGATAAAGCTTATCTGCAATATGTCC TCAAGGATAGTGATATCTCTGTCTGGATTGGTAACTTTAACAATCCTCTCACGAATTTAAGTGACTCAACTCTCAACAGT TTTGGGTTCTACGAAGCTAACGTTACTACTAGTAGTAGCGATCGCTGGGCTGATGTGAATGCAGGTAATTATGTTGGTAA CACCATTGTCATCGCTGCTTTAGATACAGATACCAGTCCTGAAGATAATTTCAAGCTTCGCTATCTGGATGTTCTCAAAG CCATTCCCGCTTCTTTGGTCAATACTGCTACGATTACTGCTCCCAATGGTTTCACTGATACCAACCCCAACAATAACAGT GCTACTGATACCAACACTATCGTTGCTCCATCTGGTGACTTATCAATCACTAAAACAGATGGTTTAACAAATGTCACCCC AGGACAGCAGATAACCTATACCATCGTGGCGCGAAACAATGGTCTGATTACTGCTACCAATGCGCTGGTGAGTGATATCA TCCCCAGCAACTTGACCAACGTCACTTGGACAAGCGTGGCCAGTGGAGGTGCAACAGACAACCAAGCCAGTGGTACAGGC AACATCAATGATCACGTCACCCTGACAGGGGGTAGCAGCATTACCTACACAGTCACAGGAACGGTAGTTAGTAATGCAGC ATCCACAGGTAGTTCGACCAGATTTGACTTTGATGGCAATAGTCCGTTGGATGGGACAGATGGCAATACACGCACATTCA CCCAAAACGGAATTACGGTCACAGCTAGAGCCTTTAGCCGTGTTGATGGCACAAATGGTGCTTGGAGTGCGGCTTATCTG GGTAGCTATACTGGTGGCTTAGGTGTTACCGACAGTAGCGAAGGAAATGGCGGTAACAACACTCATGTGGTTGATAACGT TGGGGGAAGGGATAACTACGTCTTATTCCAATTTTCAGAAGCAGTGGTGTTGGATAAAGCTTATCTGCAATATGTCCTCA AGGATAGTGATATCTCTGTCTGGATTGGTAACTTTAACAATCCTCTCACGAATTTAAGTGACTCAACTCTCAACAGTTTT GGGTTCTACGAAGCTAACGTTACTAATAGTAGTAGCGATCGCTGGGCTGATGTGAATGCAGGTAATTATGTTGGTAACAC CATTGTCATCGCTGCTTTAGATACAGATACCAGTCCTGAAGATAATTTCAAGATTCGCTATCTGGATGTTCTCAAAGCAA CTCCCGTTTCTCTGGTCAATACTGCTACGATTACTGCTCCCAATGGTTTCACTGATACCAACCCCAGCAATAATAGTGCT ACTGATACCAACACAGTCATAGCTGCTCCTGGTGTGCGTACCCCGGACTTCTGGGCAAATACAGAGTGGCAAAAGTTCTG GGATGGTAATCAAGGCAACGAGCCAACACAAAAAACACTGACTAGCGACCTTCTGTTCGCTCCTTATACCAACTCTGCCC AATCGGGAAAAGTACTTGATCCCGTGACTGGACAGTATCATGTGGGGTTACTCATCGGTGACTTCAACCGCAACGGTATA ACTGATGCAGGAGAAGACACCCTCTTCTATACTCTCAATCAAGCACGCCAGATTGTTAATTCCTCCGCACATCCCAATGC AGATAAGCGTTATGATCTCGGTCGCTCTTTAGTGGCTAGTTGGTTAAATTATGTCGCGGGGAACCCCATTGACACCGCTA ATGCAACTGATAAGGATGCTCGATACTATATCAAAGAAGGTATCAATTGGTTGCAAGCTTTAACTCCAGATGAAAATGGT GATAAGAAAGGTGATGGAGCCATTCATCAAATGACTGGTAGCAGTGTCACTAGCCCAGGGTTTAATGATACTTGGTGGAG TTATGGTATTTCCAGCGCATCGAGTTTACCAAATGCCTATAAATCCAACACCAATGTTTCCTATGGGATAGATGCTGGTA CCACCATTAATAGTAACCTGGAGCATTACAACAACGGTTTGGGGCTTGCAGATCATGTTTTCTCTGGAGGAAACGCATAA
Upstream 100 bases:
>100_bases TTACTGAGATGATCTCCTAAAGATATTTGTTCCCTATATAGATTTTAATTTTTGCTTGACTCGCTTAGGTTCGCTAAATC CAATTTTGCGGAGCCTTTTG
Downstream 100 bases:
>100_bases TAGCCTAGAAGACATCATTGTGATTAATTATTTTGATGACAATGTTTTTGTTTCCTTGAGTCTGTAATCATGCTTGCCAC TAATTAACAGAATTGATCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 1999; Mature: 1998
Protein sequence:
>1999_residues MSLTDDLLQALKLTLPDNNVNIVVAYPGSGGDGPSYVDLTISNGNFLNGLYDTYCIDANQTIVPGQSYQAQVYSSYNDPL PTGIIDKPENLDEINWLINQKFVGKQSSGGLGAYTSGDIQVAIWTLLENTVPSNILGTVGAYNQNRANQIVEAAFQNGGG FVPGISQDGIPQDIGIIVVPVNQTGTNIAQSTINILKTAALGDFVWEDLNANGVQDANEAGVEGVTVTLTGGGKDGVIGT ADDTNVTTTTDANGSYLFPLLLPGVEYKVTFSNLPTGFVFTQSNQGNDTTDSDADPLTGQAQIIELNPNEFNRTIDAGIY RKASLGDFVFKDANNNGIQDAGEVGVGQVTVELINPTNGDVIATTTTNSSGGYQFSGLTPGNYQVRFTAPTGYIFSTANQ GSNDELDSDANPSTGLTQTLTLTSGEFNGTLDAGLVPLASLGNFVFEDKNANGIQDAGETGIGNATVNLLDAAENIIATA TTDDNGLYSFTNLRPGDYKVQFVQPNGFNGVSPQNVGGNDAIDSDGLVSDIVNLSPGENDTTVDAGFYKTASLGDFVFKD ANNNGIQDAGEVGVGQVTVELINPTNGDVIATTTTNSSGGYQFSGLTPGNYQVRFTAPTGYIFSTANQGSNDELDSDANP STGLTQTLTLASGEFNGTLDAGLVPLASLGNFVFEDKNANGIQDAGETGIGDATVKLLDTSGNVIATTTTDGNGLYSFTN LQPGDYKVQFIQPSGFDGISPKNVGGNDAIDSDGLISDVVNLSPGENDTTVDAGFYQTASLGDFVFNDVNNNGIQDAGEI GVGGVTVELINPANGDVIATTTTDANGGYGFSGLTPGEYQVKFTAPAGYNFSLANQGNNDALDSDANVSTGITQTLTLAS GEFNGTLDAGLVPLASLGNFVFEDKNANGIQDAGETGIGDATVKLLDTSGNVIATTTTDGNGLYSFTNLRPGDYKVQFVQ PNGFNGVSPQNVGGNDAIDSDGLISDVVNLSPGENDTTVDAGFYKTASLGDFVFNDVNNNGIQDAGEVGVAGVSVTLTGG GADGIINGIGDTTVTTTTNAGGNYNFAELTPGQQYQVGFSGLPAGFQFTQANVGANDVVDSDANPSTGKTQVVTLVSGEN NLTLDAGIYQNAGDLSITKTDGLTNVTPGQQITYTIVARNNGLITATNALVSDIIPSNLTNVTWTSVASGGATDNQASGT GNINDHVTLTGGSSITYTVTGTVVSNAASTGSSTRFDFDGNSPLDGTDGNTRTFTQNGITVTARAFSRVDGTNGAWSAAY LGSYTGGLGVTDSSEGNGGNNTHVVDNVGGRDNYVLFQFSEAVVLDKAYLQYVLKDSDISVWIGNFNNPLTNLSDSTLNS FGFYEANVTTSSSDRWADVNAGNYVGNTIVIAALDTDTSPEDNFKLRYLDVLKAIPASLVNTATITAPNGFTDTNPNNNS ATDTNTIVAPSGDLSITKTDGLTNVTPGQQITYTIVARNNGLITATNALVSDIIPSNLTNVTWTSVASGGATDNQASGTG NINDHVTLTGGSSITYTVTGTVVSNAASTGSSTRFDFDGNSPLDGTDGNTRTFTQNGITVTARAFSRVDGTNGAWSAAYL GSYTGGLGVTDSSEGNGGNNTHVVDNVGGRDNYVLFQFSEAVVLDKAYLQYVLKDSDISVWIGNFNNPLTNLSDSTLNSF GFYEANVTNSSSDRWADVNAGNYVGNTIVIAALDTDTSPEDNFKIRYLDVLKATPVSLVNTATITAPNGFTDTNPSNNSA TDTNTVIAAPGVRTPDFWANTEWQKFWDGNQGNEPTQKTLTSDLLFAPYTNSAQSGKVLDPVTGQYHVGLLIGDFNRNGI TDAGEDTLFYTLNQARQIVNSSAHPNADKRYDLGRSLVASWLNYVAGNPIDTANATDKDARYYIKEGINWLQALTPDENG DKKGDGAIHQMTGSSVTSPGFNDTWWSYGISSASSLPNAYKSNTNVSYGIDAGTTINSNLEHYNNGLGLADHVFSGGNA
Sequences:
>Translated_1999_residues MSLTDDLLQALKLTLPDNNVNIVVAYPGSGGDGPSYVDLTISNGNFLNGLYDTYCIDANQTIVPGQSYQAQVYSSYNDPL PTGIIDKPENLDEINWLINQKFVGKQSSGGLGAYTSGDIQVAIWTLLENTVPSNILGTVGAYNQNRANQIVEAAFQNGGG FVPGISQDGIPQDIGIIVVPVNQTGTNIAQSTINILKTAALGDFVWEDLNANGVQDANEAGVEGVTVTLTGGGKDGVIGT ADDTNVTTTTDANGSYLFPLLLPGVEYKVTFSNLPTGFVFTQSNQGNDTTDSDADPLTGQAQIIELNPNEFNRTIDAGIY RKASLGDFVFKDANNNGIQDAGEVGVGQVTVELINPTNGDVIATTTTNSSGGYQFSGLTPGNYQVRFTAPTGYIFSTANQ GSNDELDSDANPSTGLTQTLTLTSGEFNGTLDAGLVPLASLGNFVFEDKNANGIQDAGETGIGNATVNLLDAAENIIATA TTDDNGLYSFTNLRPGDYKVQFVQPNGFNGVSPQNVGGNDAIDSDGLVSDIVNLSPGENDTTVDAGFYKTASLGDFVFKD ANNNGIQDAGEVGVGQVTVELINPTNGDVIATTTTNSSGGYQFSGLTPGNYQVRFTAPTGYIFSTANQGSNDELDSDANP STGLTQTLTLASGEFNGTLDAGLVPLASLGNFVFEDKNANGIQDAGETGIGDATVKLLDTSGNVIATTTTDGNGLYSFTN LQPGDYKVQFIQPSGFDGISPKNVGGNDAIDSDGLISDVVNLSPGENDTTVDAGFYQTASLGDFVFNDVNNNGIQDAGEI GVGGVTVELINPANGDVIATTTTDANGGYGFSGLTPGEYQVKFTAPAGYNFSLANQGNNDALDSDANVSTGITQTLTLAS GEFNGTLDAGLVPLASLGNFVFEDKNANGIQDAGETGIGDATVKLLDTSGNVIATTTTDGNGLYSFTNLRPGDYKVQFVQ PNGFNGVSPQNVGGNDAIDSDGLISDVVNLSPGENDTTVDAGFYKTASLGDFVFNDVNNNGIQDAGEVGVAGVSVTLTGG GADGIINGIGDTTVTTTTNAGGNYNFAELTPGQQYQVGFSGLPAGFQFTQANVGANDVVDSDANPSTGKTQVVTLVSGEN NLTLDAGIYQNAGDLSITKTDGLTNVTPGQQITYTIVARNNGLITATNALVSDIIPSNLTNVTWTSVASGGATDNQASGT GNINDHVTLTGGSSITYTVTGTVVSNAASTGSSTRFDFDGNSPLDGTDGNTRTFTQNGITVTARAFSRVDGTNGAWSAAY LGSYTGGLGVTDSSEGNGGNNTHVVDNVGGRDNYVLFQFSEAVVLDKAYLQYVLKDSDISVWIGNFNNPLTNLSDSTLNS FGFYEANVTTSSSDRWADVNAGNYVGNTIVIAALDTDTSPEDNFKLRYLDVLKAIPASLVNTATITAPNGFTDTNPNNNS ATDTNTIVAPSGDLSITKTDGLTNVTPGQQITYTIVARNNGLITATNALVSDIIPSNLTNVTWTSVASGGATDNQASGTG NINDHVTLTGGSSITYTVTGTVVSNAASTGSSTRFDFDGNSPLDGTDGNTRTFTQNGITVTARAFSRVDGTNGAWSAAYL GSYTGGLGVTDSSEGNGGNNTHVVDNVGGRDNYVLFQFSEAVVLDKAYLQYVLKDSDISVWIGNFNNPLTNLSDSTLNSF GFYEANVTNSSSDRWADVNAGNYVGNTIVIAALDTDTSPEDNFKIRYLDVLKATPVSLVNTATITAPNGFTDTNPSNNSA TDTNTVIAAPGVRTPDFWANTEWQKFWDGNQGNEPTQKTLTSDLLFAPYTNSAQSGKVLDPVTGQYHVGLLIGDFNRNGI TDAGEDTLFYTLNQARQIVNSSAHPNADKRYDLGRSLVASWLNYVAGNPIDTANATDKDARYYIKEGINWLQALTPDENG DKKGDGAIHQMTGSSVTSPGFNDTWWSYGISSASSLPNAYKSNTNVSYGIDAGTTINSNLEHYNNGLGLADHVFSGGNA >Mature_1998_residues SLTDDLLQALKLTLPDNNVNIVVAYPGSGGDGPSYVDLTISNGNFLNGLYDTYCIDANQTIVPGQSYQAQVYSSYNDPLP TGIIDKPENLDEINWLINQKFVGKQSSGGLGAYTSGDIQVAIWTLLENTVPSNILGTVGAYNQNRANQIVEAAFQNGGGF VPGISQDGIPQDIGIIVVPVNQTGTNIAQSTINILKTAALGDFVWEDLNANGVQDANEAGVEGVTVTLTGGGKDGVIGTA DDTNVTTTTDANGSYLFPLLLPGVEYKVTFSNLPTGFVFTQSNQGNDTTDSDADPLTGQAQIIELNPNEFNRTIDAGIYR KASLGDFVFKDANNNGIQDAGEVGVGQVTVELINPTNGDVIATTTTNSSGGYQFSGLTPGNYQVRFTAPTGYIFSTANQG SNDELDSDANPSTGLTQTLTLTSGEFNGTLDAGLVPLASLGNFVFEDKNANGIQDAGETGIGNATVNLLDAAENIIATAT TDDNGLYSFTNLRPGDYKVQFVQPNGFNGVSPQNVGGNDAIDSDGLVSDIVNLSPGENDTTVDAGFYKTASLGDFVFKDA NNNGIQDAGEVGVGQVTVELINPTNGDVIATTTTNSSGGYQFSGLTPGNYQVRFTAPTGYIFSTANQGSNDELDSDANPS TGLTQTLTLASGEFNGTLDAGLVPLASLGNFVFEDKNANGIQDAGETGIGDATVKLLDTSGNVIATTTTDGNGLYSFTNL QPGDYKVQFIQPSGFDGISPKNVGGNDAIDSDGLISDVVNLSPGENDTTVDAGFYQTASLGDFVFNDVNNNGIQDAGEIG VGGVTVELINPANGDVIATTTTDANGGYGFSGLTPGEYQVKFTAPAGYNFSLANQGNNDALDSDANVSTGITQTLTLASG EFNGTLDAGLVPLASLGNFVFEDKNANGIQDAGETGIGDATVKLLDTSGNVIATTTTDGNGLYSFTNLRPGDYKVQFVQP NGFNGVSPQNVGGNDAIDSDGLISDVVNLSPGENDTTVDAGFYKTASLGDFVFNDVNNNGIQDAGEVGVAGVSVTLTGGG ADGIINGIGDTTVTTTTNAGGNYNFAELTPGQQYQVGFSGLPAGFQFTQANVGANDVVDSDANPSTGKTQVVTLVSGENN LTLDAGIYQNAGDLSITKTDGLTNVTPGQQITYTIVARNNGLITATNALVSDIIPSNLTNVTWTSVASGGATDNQASGTG NINDHVTLTGGSSITYTVTGTVVSNAASTGSSTRFDFDGNSPLDGTDGNTRTFTQNGITVTARAFSRVDGTNGAWSAAYL GSYTGGLGVTDSSEGNGGNNTHVVDNVGGRDNYVLFQFSEAVVLDKAYLQYVLKDSDISVWIGNFNNPLTNLSDSTLNSF GFYEANVTTSSSDRWADVNAGNYVGNTIVIAALDTDTSPEDNFKLRYLDVLKAIPASLVNTATITAPNGFTDTNPNNNSA TDTNTIVAPSGDLSITKTDGLTNVTPGQQITYTIVARNNGLITATNALVSDIIPSNLTNVTWTSVASGGATDNQASGTGN INDHVTLTGGSSITYTVTGTVVSNAASTGSSTRFDFDGNSPLDGTDGNTRTFTQNGITVTARAFSRVDGTNGAWSAAYLG SYTGGLGVTDSSEGNGGNNTHVVDNVGGRDNYVLFQFSEAVVLDKAYLQYVLKDSDISVWIGNFNNPLTNLSDSTLNSFG FYEANVTNSSSDRWADVNAGNYVGNTIVIAALDTDTSPEDNFKIRYLDVLKATPVSLVNTATITAPNGFTDTNPSNNSAT DTNTVIAAPGVRTPDFWANTEWQKFWDGNQGNEPTQKTLTSDLLFAPYTNSAQSGKVLDPVTGQYHVGLLIGDFNRNGIT DAGEDTLFYTLNQARQIVNSSAHPNADKRYDLGRSLVASWLNYVAGNPIDTANATDKDARYYIKEGINWLQALTPDENGD KKGDGAIHQMTGSSVTSPGFNDTWWSYGISSASSLPNAYKSNTNVSYGIDAGTTINSNLEHYNNGLGLADHVFSGGNA
Specific function: Cell surface-associated calcium-binding protein which possibly mediates interactions of S.aureus with components of the extracellular matrix of higher eukaryotes. Binds 14-15 calcium ions [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 CNA-B domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011266 - InterPro: IPR008966 - InterPro: IPR008454 - InterPro: IPR008970 - InterPro: IPR011252 - InterPro: IPR005877 - InterPro: IPR019948 - InterPro: IPR013783 - InterPro: IPR019931 - InterPro: IPR001899 [H]
Pfam domain/function: PF05738 Cna_B; PF00746 Gram_pos_anchor; PF10425 SdrG_C_C; PF04650 YSIRK_signal [H]
EC number: NA
Molecular weight: Translated: 207907; Mature: 207776
Theoretical pI: Translated: 3.73; Mature: 3.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 0.1 %Met (Translated Protein) 0.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 0.1 %Met (Mature Protein) 0.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTDDLLQALKLTLPDNNVNIVVAYPGSGGDGPSYVDLTISNGNFLNGLYDTYCIDANQ CCCHHHHHHHHEEECCCCCCEEEEEECCCCCCCCCEEEEEECCCCEECCCCEEEEECCCC TIVPGQSYQAQVYSSYNDPLPTGIIDKPENLDEINWLINQKFVGKQSSGGLGAYTSGDIQ EEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCEECCCCCCCCCCEEECCCEE VAIWTLLENTVPSNILGTVGAYNQNRANQIVEAAFQNGGGFVPGISQDGIPQDIGIIVVP EEEEEEHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEE VNQTGTNIAQSTINILKTAALGDFVWEDLNANGVQDANEAGVEGVTVTLTGGGKDGVIGT CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCEEEEEEECCCCCCEEEC ADDTNVTTTTDANGSYLFPLLLPGVEYKVTFSNLPTGFVFTQSNQGNDTTDSDADPLTGQ CCCCCEEEEECCCCCEEEHEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCC AQIIELNPNEFNRTIDAGIYRKASLGDFVFKDANNNGIQDAGEVGVGQVTVELINPTNGD EEEEEECCCHHCCCHHHCCEEECCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCC VIATTTTNSSGGYQFSGLTPGNYQVRFTAPTGYIFSTANQGSNDELDSDANPSTGLTQTL EEEEEECCCCCCEEEECCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEE TLTSGEFNGTLDAGLVPLASLGNFVFEDKNANGIQDAGETGIGNATVNLLDAAENIIATA EEECCCCCCCCCCCCHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEE TTDDNGLYSFTNLRPGDYKVQFVQPNGFNGVSPQNVGGNDAIDSDGLVSDIVNLSPGEND ECCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC TTVDAGFYKTASLGDFVFKDANNNGIQDAGEVGVGQVTVELINPTNGDVIATTTTNSSGG CEEECCCEECCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCC YQFSGLTPGNYQVRFTAPTGYIFSTANQGSNDELDSDANPSTGLTQTLTLASGEFNGTLD EEEECCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC AGLVPLASLGNFVFEDKNANGIQDAGETGIGDATVKLLDTSGNVIATTTTDGNGLYSFTN CCCHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCEEEECC LQPGDYKVQFIQPSGFDGISPKNVGGNDAIDSDGLISDVVNLSPGENDTTVDAGFYQTAS CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCEECCC LGDFVFNDVNNNGIQDAGEIGVGGVTVELINPANGDVIATTTTDANGGYGFSGLTPGEYQ CCCHHEECCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCEE VKFTAPAGYNFSLANQGNNDALDSDANVSTGITQTLTLASGEFNGTLDAGLVPLASLGNF EEEECCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHCCE VFEDKNANGIQDAGETGIGDATVKLLDTSGNVIATTTTDGNGLYSFTNLRPGDYKVQFVQ EEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCEEEECCCCCCCEEEEEEC PNGFNGVSPQNVGGNDAIDSDGLISDVVNLSPGENDTTVDAGFYKTASLGDFVFNDVNNN CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCEECCCCCCHHEECCCCC GIQDAGEVGVAGVSVTLTGGGADGIINGIGDTTVTTTTNAGGNYNFAELTPGQQYQVGFS CCCCCCCCCEEEEEEEEECCCCCCEEECCCCCEEEEEECCCCCCCEEECCCCCEEEECCC GLPAGFQFTQANVGANDVVDSDANPSTGKTQVVTLVSGENNLTLDAGIYQNAGDLSITKT CCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCEEEEEC DGLTNVTPGQQITYTIVARNNGLITATNALVSDIIPSNLTNVTWTSVASGGATDNQASGT CCCCCCCCCCEEEEEEEEECCCEEEEHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCC GNINDHVTLTGGSSITYTVTGTVVSNAASTGSSTRFDFDGNSPLDGTDGNTRTFTQNGIT CCCCCEEEEECCCEEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCEE VTARAFSRVDGTNGAWSAAYLGSYTGGLGVTDSSEGNGGNNTHVVDNVGGRDNYVLFQFS EEEEEHHHCCCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEC EAVVLDKAYLQYVLKDSDISVWIGNFNNPLTNLSDSTLNSFGFYEANVTTSSSDRWADVN CEEEHHHHHHHHEEECCCEEEEECCCCCCCCCCCCCHHHCCCEEEEEEEECCCCCEEECC AGNYVGNTIVIAALDTDTSPEDNFKLRYLDVLKAIPASLVNTATITAPNGFTDTNPNNNS CCCCCCCEEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCC ATDTNTIVAPSGDLSITKTDGLTNVTPGQQITYTIVARNNGLITATNALVSDIIPSNLTN CCCCCEEEECCCCEEEEECCCCCCCCCCCEEEEEEEEECCCEEEEHHHHHHHHCCCCCCC VTWTSVASGGATDNQASGTGNINDHVTLTGGSSITYTVTGTVVSNAASTGSSTRFDFDGN EEEEEECCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEECCCCCCCCEEEECCCC SPLDGTDGNTRTFTQNGITVTARAFSRVDGTNGAWSAAYLGSYTGGLGVTDSSEGNGGNN CCCCCCCCCCEEEECCCEEEEEEEHHHCCCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCC THVVDNVGGRDNYVLFQFSEAVVLDKAYLQYVLKDSDISVWIGNFNNPLTNLSDSTLNSF CEEEECCCCCCCEEEEEECCEEEHHHHHHHHEEECCCEEEEECCCCCCCCCCCCCHHHCC GFYEANVTNSSSDRWADVNAGNYVGNTIVIAALDTDTSPEDNFKIRYLDVLKATPVSLVN CEEEEECCCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEECCCCCEEEE TATITAPNGFTDTNPSNNSATDTNTVIAAPGVRTPDFWANTEWQKFWDGNQGNEPTQKTL EEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHH TSDLLFAPYTNSAQSGKVLDPVTGQYHVGLLIGDFNRNGITDAGEDTLFYTLNQARQIVN HHCEEEECCCCCCCCCCEECCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHC SSAHPNADKRYDLGRSLVASWLNYVAGNPIDTANATDKDARYYIKEGINWLQALTPDENG CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC DKKGDGAIHQMTGSSVTSPGFNDTWWSYGISSASSLPNAYKSNTNVSYGIDAGTTINSNL CCCCCCCEEEECCCCCCCCCCCCCHHHHCCCCHHHCCCHHHCCCCEEEECCCCCEECCCH EHYNNGLGLADHVFSGGNA HHHCCCCCHHHHHCCCCCC >Mature Secondary Structure SLTDDLLQALKLTLPDNNVNIVVAYPGSGGDGPSYVDLTISNGNFLNGLYDTYCIDANQ CCHHHHHHHHEEECCCCCCEEEEEECCCCCCCCCEEEEEECCCCEECCCCEEEEECCCC TIVPGQSYQAQVYSSYNDPLPTGIIDKPENLDEINWLINQKFVGKQSSGGLGAYTSGDIQ EEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCEECCCCCCCCCCEEECCCEE VAIWTLLENTVPSNILGTVGAYNQNRANQIVEAAFQNGGGFVPGISQDGIPQDIGIIVVP EEEEEEHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEE VNQTGTNIAQSTINILKTAALGDFVWEDLNANGVQDANEAGVEGVTVTLTGGGKDGVIGT CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCEEEEEEECCCCCCEEEC ADDTNVTTTTDANGSYLFPLLLPGVEYKVTFSNLPTGFVFTQSNQGNDTTDSDADPLTGQ CCCCCEEEEECCCCCEEEHEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCC AQIIELNPNEFNRTIDAGIYRKASLGDFVFKDANNNGIQDAGEVGVGQVTVELINPTNGD EEEEEECCCHHCCCHHHCCEEECCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCC VIATTTTNSSGGYQFSGLTPGNYQVRFTAPTGYIFSTANQGSNDELDSDANPSTGLTQTL EEEEEECCCCCCEEEECCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEE TLTSGEFNGTLDAGLVPLASLGNFVFEDKNANGIQDAGETGIGNATVNLLDAAENIIATA EEECCCCCCCCCCCCHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEE TTDDNGLYSFTNLRPGDYKVQFVQPNGFNGVSPQNVGGNDAIDSDGLVSDIVNLSPGEND ECCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC TTVDAGFYKTASLGDFVFKDANNNGIQDAGEVGVGQVTVELINPTNGDVIATTTTNSSGG CEEECCCEECCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCC YQFSGLTPGNYQVRFTAPTGYIFSTANQGSNDELDSDANPSTGLTQTLTLASGEFNGTLD EEEECCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC AGLVPLASLGNFVFEDKNANGIQDAGETGIGDATVKLLDTSGNVIATTTTDGNGLYSFTN CCCHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCEEEECC LQPGDYKVQFIQPSGFDGISPKNVGGNDAIDSDGLISDVVNLSPGENDTTVDAGFYQTAS CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCEECCC LGDFVFNDVNNNGIQDAGEIGVGGVTVELINPANGDVIATTTTDANGGYGFSGLTPGEYQ CCCHHEECCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCEE VKFTAPAGYNFSLANQGNNDALDSDANVSTGITQTLTLASGEFNGTLDAGLVPLASLGNF EEEECCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHCCE VFEDKNANGIQDAGETGIGDATVKLLDTSGNVIATTTTDGNGLYSFTNLRPGDYKVQFVQ EEECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCEEEECCCCCCCEEEEEEC PNGFNGVSPQNVGGNDAIDSDGLISDVVNLSPGENDTTVDAGFYKTASLGDFVFNDVNNN CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCEECCCCCCHHEECCCCC GIQDAGEVGVAGVSVTLTGGGADGIINGIGDTTVTTTTNAGGNYNFAELTPGQQYQVGFS CCCCCCCCCEEEEEEEEECCCCCCEEECCCCCEEEEEECCCCCCCEEECCCCCEEEECCC GLPAGFQFTQANVGANDVVDSDANPSTGKTQVVTLVSGENNLTLDAGIYQNAGDLSITKT CCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCEEEEEC DGLTNVTPGQQITYTIVARNNGLITATNALVSDIIPSNLTNVTWTSVASGGATDNQASGT CCCCCCCCCCEEEEEEEEECCCEEEEHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCC GNINDHVTLTGGSSITYTVTGTVVSNAASTGSSTRFDFDGNSPLDGTDGNTRTFTQNGIT CCCCCEEEEECCCEEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCEE VTARAFSRVDGTNGAWSAAYLGSYTGGLGVTDSSEGNGGNNTHVVDNVGGRDNYVLFQFS EEEEEHHHCCCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEC EAVVLDKAYLQYVLKDSDISVWIGNFNNPLTNLSDSTLNSFGFYEANVTTSSSDRWADVN CEEEHHHHHHHHEEECCCEEEEECCCCCCCCCCCCCHHHCCCEEEEEEEECCCCCEEECC AGNYVGNTIVIAALDTDTSPEDNFKLRYLDVLKAIPASLVNTATITAPNGFTDTNPNNNS CCCCCCCEEEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCC ATDTNTIVAPSGDLSITKTDGLTNVTPGQQITYTIVARNNGLITATNALVSDIIPSNLTN CCCCCEEEECCCCEEEEECCCCCCCCCCCEEEEEEEEECCCEEEEHHHHHHHHCCCCCCC VTWTSVASGGATDNQASGTGNINDHVTLTGGSSITYTVTGTVVSNAASTGSSTRFDFDGN EEEEEECCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEECCCCCCCCEEEECCCC SPLDGTDGNTRTFTQNGITVTARAFSRVDGTNGAWSAAYLGSYTGGLGVTDSSEGNGGNN CCCCCCCCCCEEEECCCEEEEEEEHHHCCCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCC THVVDNVGGRDNYVLFQFSEAVVLDKAYLQYVLKDSDISVWIGNFNNPLTNLSDSTLNSF CEEEECCCCCCCEEEEEECCEEEHHHHHHHHEEECCCEEEEECCCCCCCCCCCCCHHHCC GFYEANVTNSSSDRWADVNAGNYVGNTIVIAALDTDTSPEDNFKIRYLDVLKATPVSLVN CEEEEECCCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEECCCCCEEEE TATITAPNGFTDTNPSNNSATDTNTVIAAPGVRTPDFWANTEWQKFWDGNQGNEPTQKTL EEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHH TSDLLFAPYTNSAQSGKVLDPVTGQYHVGLLIGDFNRNGITDAGEDTLFYTLNQARQIVN HHCEEEECCCCCCCCCCEECCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHC SSAHPNADKRYDLGRSLVASWLNYVAGNPIDTANATDKDARYYIKEGINWLQALTPDENG CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC DKKGDGAIHQMTGSSVTSPGFNDTWWSYGISSASSLPNAYKSNTNVSYGIDAGTTINSNL CCCCCCCEEEECCCCCCCCCCCCCHHHHCCCCHHHCCCHHHCCCCEEEECCCCCEECCCH EHYNNGLGLADHVFSGGNA HHHCCCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11418146 [H]